Xiphophorus couchianus (Monterrey platyfish): 114136884
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Entry
114136884 CDS
T05908
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114136884 (zeb1)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
114136884 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
Homeodomain
zf-H2C2_5
zf-C2H2_16
HVO_2753_ZBP
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
114136884
NCBI-ProteinID:
XP_027861085
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All DBs
Position
21:21442871..21503937
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AA seq
1084 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVTNYNNVLEAGSDSDDEDKLHIVEEEGSLADGADCDSTLPD
EEHPSVPSWDPVKEDCASDGEDDVSTDALVEEMLQQGDTAIIYPEAPDDDLQRQGTPDAS
VHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFSCPECSYSFAYRAQL
ERHMSVHKGGRDQRHITQSGGNRKFKCPECGKAFKYKHHLKEHLRIHSGEKPYECSHCKK
RFSHSGSYSSHISSKKCISVISVNSRQRLGGSRNQAQGSPPGLPTSPSVHCGQIREKLEH
SKPLQEQLPLNQIKTEPVDYEYKPAVITPPAMAAMNGGVFSGGAAAPLQGTVQAVVLPTV
GLVSPISINLADLQNALKVAVDGNVIRQVLENNAKGQVNSGLTTQTLHPPQQQLISAISL
PIVGQDGNAKLIINYSLDPNQGQLTPHNLKKEPVSPAQSAVDSIKSQKLPEDLSVRGNRD
QAQQKEEKTTTTCLLCENCPGGLEALHALKHCKKEDLRLNGASLDKSEAVAALLSDGGLC
NHPKNLLSLLKAYFALNAEPSKDELVKISDSVSLPIHVVKKWFSKMQQGQISLGAPTPPS
EEEDSSESHSVVSLVPGKDTATISRSVSQDSPTEATPAEVNGTHSSPASPSPLNLTAGGP
TQADTPESTEGPLDLSLPKPAREEAESMVPAARVYPSASSRQTTEEEPLNLTCTKKDTSP
LSAMGGSPLALYANQPSAKPLDIVTTMQCLRALTNNSSKQTILIPQLAYTYTTTANSPAG
TETHETIHLNGIKEERLDLGSEGFSVVDELNDSDSGPARKKMKKTDSGMYACDLCDKIFQ
KSSSLLRHKYEHTGKRPHECSICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGS
YSQHMNHRYSYCKKETQSQAGGRESPAEEDGEVPTERQRQDTAPSLLDSDERGSSTREDE
ESEEEEEGVVDMNDIQVVQIEDEEEEDKEERKEEQMEAEIEDGTLEMEEKEEVDTRQEEM
RQSVQEEEEESDADKDEVTDKEGGAAEEEDGEDGEVQEESRGETNQSGISQDEEETPEEK
ADTD
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaccaacgtg
accaactacaacaatgtgctggaggcaggctcagactcagacgatgaggacaagctgcac
atcgtggaggaggaaggcagcctcgcagacggggcagactgcgacagcaccctgccggat
gaagagcacccgagcgtgccgagttgggacccagtgaaggaggactgcgcttcagatggc
gaggatgacgtgagcacggacgccctggtggaagagatgctccagcaaggagacacggcc
atcatctacccagaggccccagacgatgacctccagcgccagggcacccccgatgccagc
gtccatgacgagaacggaacccctgattcgttctcccagctgctcacatgcccgtactgc
gcgcggggctacaagcgctacagctccctgaaggagcacatcaagtaccggcatgagaag
acagaggagagcttcagctgcccagagtgcagctacagcttcgcataccgcgctcagttg
gagcgtcatatgagcgttcataagggaggacgagatcagaggcacatcacgcagtccgga
ggcaaccggaaattcaagtgccccgaatgcggcaaagcattcaagtacaagcaccatctg
aaggagcatctccggattcacagtggagagaaaccctatgagtgctcccactgcaagaag
cgcttctcccactcaggctcctacagttcccacatcagcagtaagaagtgcatcagcgtc
atctcagtgaacagcagacagcgcctggggggcagcagaaaccaggcccagggttcacca
ccggggctgcccacatccccttcagtccactgcggacagatcagggagaaactggagcac
agcaagcccctccaggagcagctgcctctcaaccagatcaagacggagcccgtggattac
gagtacaagccggcggtaataacgcctccggccatggccgctatgaatggcggagttttc
agcggaggtgctgctgcccctctgcagggtactgtacaggcggtggttctgcccacagtg
gggttggtgtcccccatcagcatcaacctggcagacctacagaatgccctcaaggtggca
gtggacggtaacgttatacggcaggtgctggaaaacaacgccaaaggccaggtgaactca
ggcctcaccactcaaaccctgcacccccctcagcagcagctcatctcagccatcagtctg
ccaatcgtaggccaggatgggaatgcgaaacttattataaattacagtctggaccccaac
cagggccagctcacaccccataacctaaagaaagagccagtgtctccggctcagagtgcc
gttgactctatcaagtcccagaaactccccgaggatctttcagtcagaggcaacagggac
caggctcagcaaaaagaggaaaagaccactacaacctgtctactgtgtgagaactgtcca
gggggcctggaagcactccatgctctcaagcactgcaagaaagaggatctcagattgaac
ggagcaagtttagataaatctgaggcagttgctgccttgctgtcagatggaggactctgc
aaccaccccaagaacctcctgtcccttctcaaggcctatttcgccttaaatgcagagccc
tccaaggatgagctggtcaagatctctgactcagtcagtctgccgatccatgtggtaaag
aagtggtttagcaaaatgcagcagggtcagatatccctgggcgccccaacacccccatca
gaagaggaggactcctctgaatctcacagtgtggtatcactggtcccagggaaggacaca
gccactataagcagatctgtgagtcaggatagccccacagaggctacgccagcagaggtc
aacggcactcacagctcaccggcctcgccctcgccacttaaccttacagctggcggtccc
acccaagccgacacccctgagagcactgagggacccctggacctgtcgctgccaaagcca
gccagagaagaagcagagagcatggtgcctgcagcccgagtttacccctctgcttcctcc
cgccagaccactgaggaggaacctctgaacttaacttgcacaaagaaggacacgtcacca
ctctcagccatggggggaagccccctcgcactgtacgccaaccagccaagtgccaaaccc
ctcgatattgtaaccacaatgcaatgcctccgagcactgaccaacaacagcagcaaacag
actattctgatcccccagctggcttacacatacaccactacagctaacagccctgcaggg
acagagacgcacgaaaccatccacctcaatggaatcaaggaggagaggctggatctgggc
tcagagggattctcggtcgtggacgagctgaacgactccgactcgggcccagcgaggaag
aagatgaagaagacggacagcggcatgtacgcctgcgacctgtgtgacaagatcttccaa
aagagcagttcgctactgagacacaaatacgaacacacagggaagcgacctcacgagtgc
agcatctgcagcaaggccttcaaacacaaacaccacctgatcgaacacatgcgcctccac
tcgggggagaagccgtaccagtgcgacaagtgcggcaagcgcttctcccactcgggctcc
tactcccagcacatgaaccaccgctactcctactgcaagaaggagacgcagagccaggct
ggaggacgggagagccccgcggaggaggacggcgaggtccccacagagcggcagaggcag
gacacggcgccctccctactggactcagacgagcgagggagcagcaccagggaggacgaa
gagagcgaggaggaggaggagggagtggtggacatgaatgacatccaggtggttcagata
gaggacgaggaggaagaggacaaagaggagagaaaggaggagcagatggaggctgagata
gaggacggaacattagagatggaggagaaagaggaagtcgacacgaggcaggaggagatg
aggcagagcgttcaggaggaggaggaggaaagcgacgccgacaaagatgaggtgacggat
aaggagggaggtgcagccgaggaggaggacggggaggacggggaggtccaggaggagagc
agaggcgaaacgaaccagagcgggatttctcaggacgaggaggagacgccagaggagaaa
gcagacacagactga
DBGET
integrated database retrieval system
