Xiphophorus couchianus (Monterrey platyfish): 114136925
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Entry
114136925 CDS
T05908
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114136925 (rttn)
Cilium and associated proteins [BR:
xco03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114136925 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
114136925
NCBI-ProteinID:
XP_027861136
LinkDB
All DBs
Position
21:complement(13156242..13193516)
Genome browser
AA seq
2247 aa
AA seq
DB search
MELSPLIKKIGHSLVEIRVRALKSILSKLDHSLITVTDIVQEKMLFVYLLEWFNFPEVPM
KEEVLGLLLTLAKHPSSAQMLRDVGAVDFLSQLSPTIEPRLRAVIDGTLDQLFQLPELVP
SHSAVYSHGPCSATTTAPTLVPVDDNVPKMGYFHKSMHYNTNVPSQKMAVRESVRCLKFS
VFPWLTLTNTDRHILSSNESSLGSSNPNMVRTTCELLCDVILQDFPAEIFLQRPGIVKNL
LLLLRVGSGKGEVSYLHSSALSCLRQLCVALKKRLRFHQDPGFYSAKHDPVSQNSSFSYT
QEVRGNQRSQASSPVAECSPRPSVVGRTGQRARGDGQDGDAISNSGSSQGGGARAPTPQQ
TPRSPADTAHLELPDLSVEDILELQLQQLSVAQFTVATMQHTIPLLKTEGLHAFHRVLEL
LCDALLLLGDSVCELVWDDRSLVGMELKEKLQACMEQLGDVLFFHQNYSAEAPHSSQVSH
RMAYLGTAMFTIRLLQTILPPEKASENLPENAATAIFHVCLDSSLGSLLPSMQETAVAYL
EQVDSDSHSLYRRMNRAAFWMESTCNFVKEAQAEGEKNWLDLLELADHAIDGLPFHQHLP
IVKECVHMCSYLWKFDQPSPLLQTESQKLFLKLLSHPSPPVKTETYECTLNLVKDCLGIQ
NLSRQEAAACAGVNFLLHHRVLYEMSVFGLQDSAQTVNVAAKDILLFLLKGRLMMTARAW
DRFNEALYPVIPILQGYASTEESLGKCVLLISDMSDVTGDDVFPTTGKLKAALRLLFSKQ
PTVRIAAVQHILPQLTSHADANPTRVFADQSAITSLPNLFCLKNPVDVTLDTVNKSILKV
ESVEKLFCILDSNTVDISLRRSAAEQLSVVLQDKSMHPVLKNLGITERVISFITDNENGN
KSLDCLLEPCVCILRKLVYADPSLRHSLAQHNRLLLTLLRASLILKEMKSNNSEVAVLMC
LLLFDEIACIETWSDKSTSDATLSPFSLPVAAVRRYNIPFKTATHHAVSPYCCILAPSSD
LLTLSLARQALQVAWNAAWHSGIDNLLEKSNSAACDADEFHPDLKLSKSQLLLLRAAHPP
AALRDCIQAIEIAAGHKSVASALSRLSLYLLFSRLALPHVPTHSCRDILQLLGWQTVLTR
FLQVRPASIEDERLLVGIVTFLNAYFKQIPTEFTSDQRDQDLCWILELLLNQETAALLHL
LLGMESQMLTQSLEDPEEIKNHVNQRLQRELIKFFNTLLIRLSNTTDRLCLALAGPFKSQ
LALRLLQSLRLSDAPRFYGLPSLERALHGMVSLTAQPGWSSHCPDLEPSSLCSKYLSGLL
EVISSFYVEWRGNSLSFMGKGVTKNAIICLLHLSHEMMMENKDKDFISQWSFGTNDTTEE
SSGSQLGLAWLIPLWVDRDQEVRFASLSLGAALSSMPSGCQILCASCQNISGGLWGTLLN
ILLDQQESSMVRREAVFILQNLLVMPMPANAEEAKDSHWQHPCVHDEVSGVSLVGLPALQ
ALLYHCQYFHSVALSASTCYRGRYTFDLLPRPGGSGNPSLQESSLADSENSLLPWRCDPA
PSVNSGRSSSSLSTSSTAVSNALSKSSRLNTPKVSSPVNIPDDTPARLMAQGQSDRDTSN
SSTSQDSQPGKPSGMEAVVIVTPDLLTAQCGLLYNLLAVLPDFTLTAIQENQLLPVLSSL
VDVELMEKCLSELRTPGILLGIREDVKRQFVTALRFLSSFCKLLQSCVMASKELIGQMDF
LKLLLPNLVAALMLETTLLDAGTWDAVCACWTDVFTLLATVVRRGGSVAHPSVSAALGRC
WRTFAGTLSQCLDEKKADLLLHTAALQFLSTVFTEETRLCGTELQSSTSKHSSTLSDILN
GPSASELCELLLQSFEKRTFQDPLKKLTARALMTLLACSPTAQNHAATAGLIDSCVEQLK
QTHSHLHLESIRPSKASTRKKEGGHLKEVKLTAGILRSALYCNDECKVVAMDARLALRLY
ALWPWLLLDDPTMEAVLELLCVYTADSQPACSSLCVSSPSGVPGSKGSSNASLMHSVMKL
SSLAPDNSPIQNLSFSLLTNLVVSRDCRCILQKNNFLQALLLVPVPKVAGAKASSVGGGG
NLLSLWLRFLVSLSATEDGQQNILKVSGVLELLAELAPHRPHALLTLHNLCFSPAIKSHV
MTNDKAMKVLLWCLESKELETCCIGASALWALLHNNQRAKTALKCPSVRLKIKEALTVSK
KDAEKKQEPLNSYLQKCLDQLSQLLKS
NT seq
6744 nt
NT seq
+upstream
nt +downstream
nt
atggagttatctccacttataaagaaaataggtcactctttagtggaaattagagttcga
gcgctgaagagcatcttaagtaaactggaccattccctcatcactgtgactgacattgtt
caagaaaagatgctgtttgtgtatctgcttgagtggttcaatttcccggaggttccaatg
aaggaggaagtccttggattgcttttaacattagcaaagcatcctagttcagcgcagatg
ctgagggatgtcggggcggtggactttctctctcagctttctcctacaatcgagcccaga
ctgcgagctgtcatcgatggaaccctggaccagctgttccagcttcctgagctagtcccc
agtcattcagctgtctactctcatggaccatgcagcgcaactacaacagccccaacactt
gttccagttgacgataatgtgcctaaaatgggttatttccacaagagtatgcactacaat
acaaatgtcccatctcagaagatggcagtgcgtgaatctgtgagatgtctgaaattttct
gtatttccatggctgactttaacaaacacggaccgacacatactttcttccaatgagagc
tctctggggagcagcaatcctaacatggtgaggacaacctgtgaacttctgtgtgacgtc
attctgcaggactttccagcagaaatcttcctgcaaaggcctggaatcgttaagaacctt
ttgttgctgctcagggtgggttcaggtaaaggtgaggtcagctacctccactcatctgct
ctgtcctgcctgcggcagctttgtgttgccctgaagaagaggctgcgctttcatcaagat
ccaggcttctattcagcaaaacatgatccagtgtcgcagaactcgtccttctcttacacc
caggaggttcgggggaaccagcgctcacaggcctcctctcctgtggctgagtgctctcct
cggccctctgtggtgggtcgcacaggccagagagccaggggagatggtcaggacggagac
gcaatctctaacagtggcagctcacaaggaggtggggcaagggcccccaccccgcaacag
acgccccgttcccctgcagacacagctcacctggagcttcccgacctgagcgtggaagac
attctggagcttcagttgcagcagctcagcgtggcccagtttactgttgccaccatgcag
cacaccataccgctgctgaagacagaaggtttgcatgcgttccaccgtgttctggagctg
ttgtgtgatgctctcctcctgcttggggacagcgtttgcgagctggtctgggacgatcgc
agcctggtggggatggagctgaaggagaagctgcaagcctgcatggagcaactgggagat
gtactcttctttcaccagaactattcagcagaggcacctcacagttcccaggtctcccac
agaatggcctacttagggactgccatgtttaccattagactcctgcagaccatactccct
ccagagaaggccagtgaaaacctccctgaaaatgcagcaacagctattttccacgtatgc
ttggactcatcgctgggaagtctattacccagcatgcaagagacagctgtggcctacttg
gagcaagtggattcagacagccacagcctctacaggaggatgaatagagctgcgttttgg
atggaatcaacttgtaacttcgtgaaggaggcacaagctgaaggggaaaagaactggttg
gacctactggaacttgcagaccacgcaatagatggtcttccatttcatcagcacctacca
atagtcaaggaatgtgttcacatgtgctcttacttgtggaagtttgatcagcccagccct
ctcctccagactgagagccagaaactcttcctcaagctgctgtcccatccatcgccccct
gtcaaaacggaaacatatgagtgtactttaaacctggtcaaggactgccttggcatccag
aatctttcaagacaggaagcagcggcatgcgctggcgttaacttcctcctccaccacagg
gtcctgtatgaaatgagtgtttttggactgcaggactctgctcagacggtgaacgttgct
gccaaggatatccttctattcctcctcaagggacgattaatgatgacggctcgagcctgg
gacagattcaatgaggcactttacccagtcatacccatattacagggctatgccagcaca
gaggagtcacttggaaagtgtgtcctgctgataagtgacatgtcggatgtgacaggagac
gatgtttttcccactacaggcaagctgaaagcagcgctccgactcctcttctctaaacag
cccactgtcagaatagctgcagtgcaacacatcctgccccagctaaccagccatgctgat
gcaaaccccaccagagtattcgcagatcaatcagcgatcacgtctcttcccaacctcttc
tgcctcaaaaaccctgtagacgtcactctggacaccgtcaataaatccattctaaaggtg
gaatcagtagagaagctgttttgcatcttggactctaacactgtagacatctctctcaga
agatcggcagcagagcagctttctgtcgtgctacaagacaaatcaatgcaccctgtactg
aagaatcttggcatcacagagagagtcatttcttttatcacagacaatgaaaatggcaac
aagagcctcgattgtcttctggagccgtgtgtatgcatcttgagaaaactggtgtatgct
gatccatctctgaggcacagcctggcgcaacacaaccgcctgctcctcacactgctcagg
gcttccttgatcttgaaggagatgaaaagcaataacagtgaggtggccgtcctcatgtgt
ttgctgctttttgatgagatcgcttgcattgaaacatggtcagataaatccacatcagat
gcgactctttcaccattttctctgccagtagctgcagtacggaggtacaacattcccttt
aagacagcaactcatcacgcggtcagcccgtactgctgcatcttggctccttcctctgac
cttttgaccttgagtctggcccgccaagccttgcaggtggcctggaatgctgcatggcat
tctgggatagataatctcctggaaaaatcaaacagtgctgcctgtgatgctgatgaattt
caccctgatttgaagctgtcaaagtcgcagctcttgttgctccgggcagcgcaccctcca
gctgcgctccgtgactgcatccaggctatcgagattgcagcagggcacaaatctgtggcc
tctgccctgtccaggctcagcctctatttgttgtttagcagactggctctcccacatgtt
cccactcacagctgcagagacatcctccagttgctcggctggcagacagtgttgaccagg
tttctccaggtgcgcccggcctctattgaggatgaaaggttgctggtgggaattgtgaca
tttttgaatgcctacttcaaacaaatccccacagagtttacctctgaccaaagggaccag
gacctatgctggatattggagctgcttctcaaccaggagactgctgctcttcttcatttg
cttcttggtatggagtcgcagatgttgactcagagtttagaagatcctgaggagattaag
aaccacgtaaaccagagactgcagagagaactcataaagttctttaacacgcttctgatc
aggctgtcaaatacaactgacaggctatgtttggcattagcaggtcccttcaagagccag
ctggcgctgcgcttgcttcagagcttgcggttgtctgatgccccgcgtttctatggcctt
cccagcctggagagggcactgcacggcatggtcagcctgactgcccagcctggctggagc
tcccactgccctgacctggagcccagctccctctgctccaaatatctcagtggattatta
gaggtgatttcttcattttacgttgagtggagagggaactcattgtcattcatggggaaa
ggtgtgacaaagaacgccattatttgcttgcttcacctgtcccatgagatgatgatggaa
aacaaggataaggacttcataagccagtggtcttttgggactaatgacaccacagaggaa
agtagcggctctcagcttggtttggcgtggcttatcccgctttgggtggaccgagatcaa
gaggtgaggtttgccagtctgagtttaggcgctgctctctcctccatgcccagcggctgc
cagattctgtgtgccagctgtcagaacatcagcggaggtctgtggggcacgctgctcaac
atcctcttggatcaacaggagagcagcatggttcgcagagaggctgtgtttatcttgcag
aacttgctggtgatgcctatgcctgccaacgcagaggaggccaaggactcccactggcag
cacccgtgtgtccatgatgaggtttccggtgtgtctttggtgggtcttccagcactgcag
gctctgctgtaccactgtcagtatttccacagtgtggctctctctgcctcgacttgctac
cgtggcaggtacaccttcgaccttctgccacggcctggtgggagcggtaatcccagcctt
caggaaagctctttagctgattcagaaaattccctgctgccttggagatgtgaccccgca
cctagtgtcaactctggaagaagttccagctccctttctacttcaagcactgcagtcagc
aatgctctaagtaaaagttcaaggctgaacactcccaaagtttcctccccagtcaacatc
ccagatgatactcctgccaggctgatggctcaaggtcagagtgatagagacacaagcaac
tcgagtacctcacaggactcccaaccaggcaagccttcaggcatggaagcggttgtcata
gtaactcctgacctcttgacggcccagtgcggcctgctgtataatctgctggccgtcctg
ccagacttcaccctcactgccatccaagagaatcagttactgccggttttgagcagtcta
gtagatgtcgaactcatggagaaatgtctgagcgagctcaggactcccggcatccttctc
ggaatcagagaagacgtcaagcgtcagtttgtcactgcacttcggttcctgtcgagcttt
tgcaagctgctgcagtcttgtgtcatggcaagcaaggagctgattggtcagatggacttc
ctgaagcttctgttgcctaatctggtggctgcacttatgctggaaaccacattattagac
gcaggtacgtgggacgcggtttgcgcgtgctggacagacgtgtttacgcttctggctact
gtggtgaggagaggcggctcggtagctcacccatctgtctctgccgcgctgggcagatgc
tggcggacattcgcaggaacactatcccagtgtctggatgagaaaaaggcagatttgctg
ctccacacagcagctctgcagttcctctccacagttttcacagaggagacgaggctctgc
ggcacagaactccaaagctccacatccaagcacagcagcacactgtcagatatcctaaat
ggtccctctgccagtgagctgtgtgaactgttattgcagagctttgagaaaaggaccttt
caggaccctttaaagaagctcacagccagagctctgatgacacttctggcctgcagtccc
acagctcaaaaccacgcagccactgccggcttaattgacagctgtgtggagcagctgaag
cagactcattcccacctccacctggagtccatccgacccagcaaggcttctacccgcaaa
aaggaagggggccatttaaaagaagtcaagctgactgcagggatcctgcggagcgctctt
tattgcaacgatgaatgcaaagtggttgctatggatgcccgtttagctctgagactctac
gctctgtggccttggctcttactggacgaccccacaatggaagcggttctggagctcctg
tgtgtgtacacagccgacagccagccagcatgcagttccctctgtgttagcagccccagt
ggggtgccaggatctaagggctcctccaatgcctctctgatgcactcagtcatgaagctg
agctctcttgccccagacaacagccccatccagaatctatccttctctctcctgactaac
ctggttgtgtcacgagactgtaggtgcatcctgcagaagaataatttccttcaagccctc
ctgttggtgcctgtccctaaggtggctggtgctaaggcctcatcggtcggtggtggtggg
aacctcctgagcctgtggctgagattcctagtcagcctgtccgccacagaggacgggcag
cagaatattctgaaagtgtccggagttctggaactactggctgaactggcaccgcatcga
ccacacgcactgctcacccttcacaacctctgcttcagccccgccatcaaatcacatgtc
atgactaatgataaagccatgaaagttttgttatggtgtttggaaagtaaagagctggaa
acctgctgtatcggagcgtctgcactctgggctttgctccacaacaatcagagggcgaag
actgcactgaaatgtccatctgttcgattaaaaatcaaggaggcactgaccgtctccaag
aaagatgcagagaagaagcaggaacctttgaactcctacctgcagaagtgcctggatcaa
ctttcccagctgctaaaaagttga
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