Xiphophorus couchianus (Monterrey platyfish): 114136945
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Entry
114136945 CDS
T05908
Symbol
myom1
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114136945 (myom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114136945 (myom1)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
114136945 (myom1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Tissue_fac
Ig_J_second
Receptor_2B4
C2-set_3
C2-set_2
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
114136945
NCBI-ProteinID:
XP_027861178
LinkDB
All DBs
Position
21:8138073..8165401
Genome browser
AA seq
1568 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRSYRSTEAESKMRHYQSSSRYSAGTSLSSSSRGLKVSSHSGLEE
NRLSPLPKRSKPSYLALDKENQIIGYVVPIFRGSQEFATGLSDTEEARVRDTAAYMARRD
LFTSGLEMERSEVISRKEAMRESAERISLNKRIHEHEEHFKRMNEDSLMHTPEFVIKPRS
HTVWEKQCVRLHCTVSGWPDPRVIWYKNNVAIDPLANPGKFKLESRYNVHSLEINKCDFD
DTAQYRVSAMNSQGEQSAFASVVVKRFKGEIDETLPVPRLGPVSEYGITFQIHIVDTFGV
SFGREGETMSLGCTVIIYPALHRYQPEVQWYRDDVLLSPSKWTHMHWSGDRATLTLTHLN
KEDEGLYTLRVATKSGYETYSAYAFVKDADAEVEGAPGAPLDVRCLDANKDYIIVTWKQP
AVEGGNAILGYFVDRCEVGTTHWVQCNDTPVKFARFPVTGLVEGRSYIFRVRAVNKTGIS
HPSRVSEPVAAMDPADRARMRGTSAPWTGQIIVTEEEPAEGIVPGKPRELQVTEATKNYV
VLSWKPPGEKGLEGVMYYVEKCVSGTDNWQRVNTEIPVKSPRFALFDLAEGKSYLFRVRC
CNSAGVGEPSEPTEAITVGDKLDIPSAPGKVVPTRNTDTSVVVSWEASKDVKDLVGYYIE
CSIVGSDVWEPCNNKPVRATRFICHGLITGEQYVFRVRAVNAAGLSQFSPISEPVEVKAA
IGGGIPHASPAPPYGITVLECVRDAMVLSWKQPTFIGGADITGYFVDYREVVDGVPGKWH
EANVKAVSERAYRVSELRENRKYQFQVRAANMAGVGIPSMPSNTFLCEEWTIAVPGPPHD
LQVLEVRSDSLVLLWKPPVYQGRDPVNGFYVDIKEGDAPGEAWRGVNTKAAEKTYLKVKD
LKEGQTYVLRVRAQNKAGVGKTSDATEPVLALTKPGTKEIVVEVDDDGVISLNFECSNLM
PDSKFVWSKDYEEITDSSRLTTETKGNKSKTVFNSPGEEDIGVYSCLVTHTDGASSSYTL
SEEELKRLLEVSHDHKFPIIPLKSDLAVELQEKGRVRFWLQVAQMSANGKVDYVFNDNVL
SQGDKYKMNFDKNTGVIEMFMESLTPQDEGTYTFQLNDGKATNQSSLVLIGDVFKQLQKE
SEFQRKEWFRKQGPHFIEGLSWEVTPDCCVILKCKVGNIKKDTSALWHKDGHQIKADEQL
GFTEGVLKLEIAQISRKDSGVYEVVLKDERGKDTSTLNLTDQGFKDLMNEVFSFIANSST
PLKITSTDEGIRLYTFVSIYNDLLQVTWHYKDSAISFSDRIKSGVVGEQLWLQITEPTEK
DMGKYAIEFYDGKGGLRRTVELSGQAFDDAFAEFQRLKAAAIAERNRARVAGGLPDVVTI
QEGKALNLTCNISGNPVPEVTWLKNDREITSDEHCILKFESGKFASFTITGVNTSDSGKY
SILVKNKFGTESGDFTLEITEGTPDLGVTSYWTDAEGNVVFNPNTPEEKMKTSVTGMKNP
KRKGSVARDPAKRMEDKKEGSSSRALETEKMTDDAPTETKSSKSDQSVDAKEILLEKSSS
SETEAKTA
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatcaatacccttctaccagaagcaccatcgccactacgaccgtagctaccgt
agcacggaagcagagtctaaaatgaggcactaccagtccagcagcaggtactctgctgga
accagcctgtcctccagcagcaggggacttaaggtgtcttctcactcgggactggaggag
aacagattaagccccttacccaagcgatccaagccatcttacttggctcttgacaaagag
aaccaaatcatcggctatgtagtgcccatcttcaggggcagtcaagagtttgctacggga
ttgtcagacacagaggaggccagagtgagagacacggcagcatacatggcccgcagggac
ttgtttacgagtggtctggagatggagaggtcagaggtgatttccaggaaggaggccatg
cgtgagtcggctgaacgcatctctctgaataaacggatccatgaacacgaggaacacttc
aagaggatgaacgaagacagcctgatgcacaccccggagtttgtgattaaacctcgctcc
cacactgtgtgggagaagcagtgtgtgcggctgcactgcactgtcagcggctggcctgac
cccagggtcatctggtacaaaaacaatgtggcaattgacccacttgccaatcctggcaag
tttaaactggagagcagatacaatgtgcactcgctggagattaacaaatgtgattttgat
gacactgcccagtatcgtgtttctgccatgaattcgcaaggagagcagtctgcatttgcc
tctgtcgttgtcaaaaggttcaaaggtgaaattgatgaaacactgccagtgcccagactc
ggcccagtttccgagtatggcatcacgttccagattcacatcgttgatacgtttggagtg
tcgtttggaagagagggggagaccatgagtttgggctgcacagtaatcatctacccagct
ctccaccgctaccagccggaagttcagtggtacagagatgatgtgctgttgtctccatct
aaatggacccacatgcactggagtggagaccgagccacgctgacactcactcaccttaac
aaggaggacgagggcctgtacactttgcgagtcgccactaagtctggatacgagacctac
tctgcctatgcgtttgtcaaagatgcagatgcagaggtggaaggtgctcctggagcccca
ctggacgtacgctgtctggatgccaacaaggattacattattgttacctggaagcaacca
gctgttgagggaggaaacgccatcttgggctactttgttgacagatgtgaggttggaaca
actcactgggttcagtgcaatgacactccggtcaagtttgcccgtttccccgtcactggt
ttggtggagggtcgttcctatatcttccgagtccgagctgtcaacaagaccgggatcagc
cacccgtctcgggtctctgaaccggtggcagcaatggatccggccgatcgagcccgcatg
agaggcacttctgcaccctggaccggccaaatcattgtcacagaggaggagcctgcagag
ggcattgttcctggcaaacctcgtgagttgcaagtgactgaggcaaccaaaaactatgtg
gtcctgagctggaagcctcctggagagaagggccttgaaggggtcatgtactatgtggag
aagtgtgtctcgggcacagataactggcagagggtgaacacagagatcccagtcaagtct
cctcgcttcgctctgtttgatcttgctgagggaaagtcctacctgttccgtgtccgctgc
tgcaactctgctggtgtcggcgaaccgtctgagccaactgaagccatcactgtgggcgac
aagcttgatatcccatcggctccggggaaggtcgtccccaccagaaacacagacacatcc
gtcgtggtgagctgggaggcgtctaaggatgtcaaagatttggtggggtactacattgag
tgtagtattgttgggagcgatgtgtgggagccatgcaacaacaagcctgttagggcaaca
aggttcatctgccatgggttgattactggagagcagtacgtgttcagggtgagggctgtg
aacgccgcagggctcagccagttctccccaatatcagaaccagtggaagtaaaagctgcg
attgggggcggcattccacatgcttctcctgctccaccctatggcatcacagttctggag
tgtgtgcgcgatgccatggtgctctcttggaagcagccgaccttcattggaggagctgac
atcaccggctatttcgtagattaccgcgaggtcgttgatggcgtgccggggaaatggcac
gaggccaacgtgaaggctgtgagcgagagggcctacagggtgtcggaactgcgggaaaac
agaaagtatcagttccaggtgcgagctgccaacatggcgggtgtcgggatcccatcgatg
cccagtaacaccttcctgtgcgaggagtggaccattgctgtaccaggacctcctcacgat
ctgcaggttttagaggtgcgtagcgactccctggtgttgctgtggaaacctcccgtgtac
cagggccgcgatccggtcaacggtttctacgtagacatcaaggaaggagatgcaccaggg
gaagcctggaggggcgtcaacaccaaggctgcagagaaaacgtacctcaaggttaaggat
cttaaggaaggacaaacgtatgtgctgagagtgcgtgctcagaataaagccggtgtgggc
aaaacctcagatgctacagagccagtcctagctctgaccaaacctggcactaaggagata
gtcgtggaagtcgatgatgatggtgtcatctccctgaattttgaatgctctaacttgatg
cccgactccaaatttgtgtggtccaaggattatgaagaaatcacagactccagtcgcctg
accacagagaccaagggaaacaaatccaaaaccgttttcaacagtcctggggaggaggac
attggtgtttactcatgtcttgtcacccatactgatggtgcttcatccagctacactctc
tctgaagaagaactaaagaggctgctggaggtcagtcacgaccacaaatttccgattatt
ccactgaagtcagacctggcagtcgagttacaggagaagggcagagtgcgcttctggctg
caggtggcgcaaatgtcagcaaacggcaaagtggattacgttttcaacgataacgttctc
tcccagggagataaatacaaaatgaactttgacaagaacaccggtgttattgagatgttc
atggagtctctgactcctcaagatgaagggacttacactttccagctgaacgacggaaaa
gcaacaaatcagtccagcttggtgctgataggtgatgtgttcaagcagctgcagaaagaa
tcagagttccagagaaaggaatggttcagaaagcaaggtcctcattttattgaaggcttg
agttgggaggtaacgccagattgctgcgtgatactcaagtgcaaggttggcaacataaag
aaggatacctcggctctgtggcacaaagacggacaccagatcaaagccgatgagcaactc
ggctttacagagggagttctcaaactggaaattgcccagatttccagaaaggattctggt
gtgtatgaggttgttctaaaggatgagagaggaaaggacacatccacactgaatctgaca
gatcaaggtttcaaagacttgatgaatgaagttttcagctttattgctaattcctccact
ccactgaagatcacaagcacagatgaaggaattcgactctacacatttgtcagcatctac
aacgacttgctccaagtcacatggcactacaaggactctgcgatctccttctctgaccgt
ataaagagcggggtggttggagaacagctgtggcttcagatcacagagcccacagagaaa
gacatgggaaaatatgccatagagttttacgatggaaagggcggtctcaggagaacagtg
gaactctctggtcaagcatttgatgatgcttttgcagaatttcagagactcaaagctgca
gctattgcagagagaaatcgtgctcgagtggcaggaggcctaccagacgtggtgactata
caggagggcaaggctctcaatctcacctgcaacatttcgggcaacccggtgccagaggtc
acctggctgaagaacgacagggagatcacctccgatgagcattgcatcctgaagttcgag
tcgggcaagttcgccagcttcaccatcaccggcgtgaacacgtcggactccggcaagtac
agcattctggtgaagaacaagttcggcacagagagcggcgacttcaccctcgagatcaca
gaggggacgcctgacttgggcgtgacctcctactggactgatgctgaaggaaatgtggtt
ttcaacccaaatactccagaagaaaaaatgaaaacctcagtcacaggaatgaaaaaccca
aaacgaaaagggtctgtagctagagatcctgctaaaagaatggaagacaaaaaggagggc
agcagcagcagggcgctggaaacagaaaagatgacggatgatgccccaacagagacaaaa
tcttcaaagtcagaccaatcagtggatgctaaagaaattctgttggagaagtcatcctct
tctgagacagaagccaaaacagcctaa
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