Xiphophorus couchianus (Monterrey platyfish): 114136957
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Entry
114136957 CDS
T05908
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114136957 (ythdc1)
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114136957 (ythdc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
114136957
NCBI-ProteinID:
XP_027861200
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Position
21:complement(23478359..23494520)
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AA seq
662 aa
AA seq
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MAADRREDKDGELNVLEDLLTEAPDQDDELYNPETEREVSDKKGVKRKRERSESQDVKRL
RPSSGHAPSRSSGKRALSSKKASSPRRHTAAYHHEYYEERKGRRPAREGPRSRGAEDGRR
REPQRGVEALSRKLRRDERRVSPSPHGEDNQSDEEAEYSSEPASGSSSPAASHGDDEEEE
EEEDNQEEEGEEGMEEEEEEEEGEKEDEDEEEDEYDERHGDGNDYDTRSEAGDSRSASSV
SFSDGESGRSGSASEASGSEKKREKLSSSVRAVRKGMENPTSKLRYILREARFFLIKSNN
HENVSLAKAKGVWSTLPVNEKKLNAAFQSARSVILVFSVRESGKFQGFARLSSESHHDGS
PIHWVLPAGMNAKMLGGVFKIDWLCRRELPFIKTAHLFNPWNDNKPVKIGRDGQEIQPKV
GAQLCALFPLDESVDVHHVARRVRQKGQTPSELRPRGRPPQREPGRRRPEEYDLHGRKRP
RADGPPDFNQRPGFIPDLRSQPVDRRFSSVRRDVFLNGSYDYMRDYHHNVGPPAPWQTLA
AYPGVEQQPPHHPPYYHHSHPPPPPHQAFHHHHPSLPPHEAPPPRFRDKQRLPQHRAFAS
SPHDYDMRVDDFLRRTQAVVSSRRERERQRERERGGPRRDRERERARDRERERDKERGRY
RR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccggcgcgaggacaaagacggggaactgaacgttctggaggatcttctg
accgaagcgccggatcaggatgacgagctctacaatccggagacagagcgtgaagtcagc
gacaagaaaggagtgaagaggaagcgcgagcgatcggaaagccaggatgtgaagaggctc
cgcccctcgtcaggccacgccccctccaggtcttctgggaaacgggcgctgagctccaag
aaggcgtccagtccgcgccgccacaccgccgcctaccatcacgagtactacgaggagcga
aaggggcggcgcccagcccgagagggcccgcggagccgcggcgcggaggacggccggcgc
cgggagccgcagcgtggcgtggaggctctgagccggaagctgcggcgcgacgagaggcga
gtgagcccctcccctcacggcgaagacaaccaatcagacgaggaggcagagtacagctca
gagccggcgtcgggaagctcctcccccgccgcctcgcatggcgacgatgaggaggaggaa
gaggaggaagataatcaggaggaggagggggaagagggcatggaggaggaagaggaggaa
gaagagggagagaaggaggatgaagatgaggaggaggatgaatacgatgagcgccatggc
gacggcaacgactacgacacgcgcagcgaggccggcgactctcgctccgcctcctccgtc
agtttctcggatggagagtcgggacgctcaggatccgcctccgaagcttcagggtcggag
aagaagcgagagaagctgtcgtcgtcggttcgagctgttcggaaaggaatggagaatccc
accagcaagctacgctacatcctgcgggaagcccgcttcttcctcatcaagagcaacaac
cacgagaacgtttccctggccaaggccaagggcgtctggtccacgctgccggtcaatgag
aagaaactgaacgccgccttccagtcggcgcgcagcgtcatcctcgtcttctccgtcagg
gagagcggcaagttccaaggtttcgctcgcctgtcgtcagagtcgcatcatgacggttct
ccgatccactgggttctccctgctgggatgaacgccaagatgctgggcggagtcttcaag
atcgactggctctgcaggagggagctgcccttcatcaagacggctcacctgttcaacccc
tggaacgacaacaaacctgtgaagatcggacgggacggccaggagatccagccgaaggtg
ggcgcccagctgtgcgccctgttcccattggacgagagcgtggacgtgcaccacgtggcg
cggcgcgtgcgtcagaagggccagacgccgtcagagctgcggccgcgtggccgcccgccg
cagcgcgagccgggaaggcgtcgacctgaagagtatgaccttcacggcaggaagcgaccg
cgagccgacggcccgcccgacttcaaccagcggccagggttcatcccggacctacggagc
cagccggtggacaggagattctccagcgtcaggcgagacgtcttcctgaacgggtcctac
gactacatgagggactaccaccacaacgtggggcccccggctccctggcagactctggcg
gcgtaccccggcgtggagcagcagcccccccaccacccgccctactaccaccacagccac
ccgccgccgcccccccaccaggccttccaccaccaccacccctccctgccgccgcacgag
gctccgccccctcgcttcagagacaagcagcgcttgccgcagcaccgcgccttcgcgtcc
agcccgcacgactacgacatgcgagtggacgacttcctgcggcgcacacaggcggtggtg
agcagccggcgagagcgcgagaggcagcgagagcgagagcgcggcgggccgcgccgcgac
cgcgagcgagagcgggcgagggacagggagagagagagggacaaggagagggggcggtac
cgcaggtga
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