Xiphophorus couchianus (Monterrey platyfish): 114137027
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Entry
114137027 CDS
T05908
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114137027 (rnf6)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114137027 (rnf6)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114137027 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING-like
zf-RING_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
114137027
NCBI-ProteinID:
XP_027861304
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All DBs
Position
21:11695965..11702523
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AA seq
716 aa
AA seq
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MDPPGGGSERRRQAERLRREEAYYNFINELSEEEYRLMRDGNLLGTPGEVTAEELRQRLD
GAKERVSSQPHAEQRSQTGDSGEQQSSSSAGEERGAGGRGGAGATEAGADSSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHIDTVNSVD
APELPVTPLNTSARTASPLSSSRPSATPRPAPYPSPRPAIRRIETRRTRSSTTALSMSSA
TLPPAEIVPATNQRRASTLHSSAPSSNVPSPPDDQSAPSQHHVLNVEAEHGRNEMPPTLD
CPRVSPQGDSQPQAAGHESRSSRTRSRGRARRAAAAGGGVSSRASRRSRSPLNRTPSVST
LPPAGSSPNGSTIQTGEPSGVTTSVSMETGGIVSEPDAVLESAVETVERASELPAAGAGS
SAVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRS
ERAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEASSESVA
PSHADVGATNSSSGRLHLNENEPGQVGTNEVVQGLEGQVRSEDEQIGQARFGGGVVSSID
GRANSRDTNNLVENGTLPILRLAHFFLLNDDEDDEHPRGLTKEQIDNLSTRTYGQASLEG
EMGRACSVCINEYTQGNKLRRLPCSHEFHVHCIDRWLSENNTCPICRQPILAGHHD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggaagtgaacggcggaggcaggctgagcgtcttcgacgggag
gaggcatactacaactttattaatgaactgagtgaagaagagtaccgcctgatgagagat
ggcaatctgctgggcactcctggggaggtgactgcagaggaactccgtcagcgcctggac
ggagccaaagagcgggtgtcgtctcagccccatgctgagcagcgatcgcagactggtgat
tctggagaacagcagagcagtagcagcgcaggagaggagagaggggctggaggaagagga
ggggccggggctacagaagctggagccgattcttctaatggtgattcgttactggagtgg
ttgaacacgttcaggcgcaccggtaacgcgactcgaagcggccagagtggtaaccagacg
tggagggctgtcagccggaccaatcccaacagcggggagtttcgtttcagtctcgagatc
aacatcaaccacgatcagcccgagccgggagagcatattgacactgtgaactctgtggat
gccccagaactcccggtgactcctctcaacacctccgcccgcaccgcttcccccctctcc
agctctcggccttcagccactccgaggcctgcgccttacccctccccacgcccggccata
agaaggatcgagacccggcgtacacgcagcagtaccaccgctctatccatgagctccgcc
acgcttcctcctgcagagatagtcccagccaccaaccagaggcgggcttctactttgcat
tcatcagcaccttcttctaatgtccccagtcctcccgatgatcaaagtgcaccatcgcag
catcatgtcctgaatgtagaggcagagcacgggcgtaatgaaatgcctcctactctagac
tgtcctcgggtgtcaccacagggcgactctcaaccccaagctgcgggacacgaatcacgc
agcagcaggactcgatcccgtggccgagcgcgcagggctgcagcagcagggggcggagtt
tcttctcgcgcatcgaggagaagtcgatcccctttgaacagaacgcctagtgtaagcacc
ctcccaccagctggaagcagtccaaacgggtctacgatccaaactggtgagccgagcggt
gtcacgacctctgtatccatggagaccgggggaattgtgtccgaacccgacgctgtgctg
gagtccgccgtggaaacagtagagcgcgcaagcgagttgcccgcagcaggcgcaggaagc
tcggcggtcagacgccatccaacaatcatgctggacttgcaggtgagaaggatccggcct
ggcgagaacagggaccgggacagcatcgccagcagaactcgatcccgcgcgcgggtcgct
gagaacacggtcacgttcgaaagtgacagcggtgggttccgacgcaccatctcccgctcg
gagcgagccgggatccgcacctacgtcagcaccatccggattccgttgaggcgcatcagc
gagacgggcctcggagaacccaactctaccgccctgcggtccatcttgcgtcagattatg
actggatttggggagcttagctcgctcatggagacggaggcgagttcggaaagcgttgcg
cccagccacgctgacgttggcgctactaatagcagtagcggtcgtttacatttaaatgag
aatgagcctggccaggttgggaccaatgaggtcgttcaagggttggagggccaggtgagg
agcgaggatgagcagattgggcaggccagatttggaggtggagtagttagctccatagat
ggacgggcaaacagccgagacaccaacaacttggttgaaaacggcaccctacccatccta
aggttggcacacttctttttactcaacgacgacgaagacgacgaacatccccgaggtctg
accaaagagcagatcgacaatctatccacgcgtacgtacggtcaggccagccttgaaggt
gagatgggtcgcgcctgcagcgtgtgcatcaatgaatacactcaaggcaacaagctaagg
cgcttgccctgctcccatgagttccacgtccactgcattgaccgctggctctccgaaaac
aacacctgccccatctgcaggcagccaatcctcgcagggcatcacgactga
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