Xiphophorus couchianus (Monterrey platyfish): 114137039
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Entry
114137039 CDS
T05908
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114137039 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114137039 (pola1)
Enzymes [BR:
xco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114137039 (pola1)
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
114137039 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
114137039
NCBI-ProteinID:
XP_027861334
LinkDB
All DBs
Position
21:13888552..13944817
Genome browser
AA seq
1477 aa
AA seq
DB search
MAPVADPDKDMEVPDGDEKGDACGLAKSRSRREKREKVGRKSALEQLKKAKKGEKIKYEV
EEITSVYEEVDEQQYSKMVRERQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVESKGKGG
AKGGESKKTLKKSSVAKPNTIKSLFMNSNVKRPAEKDVDLSKDDLLGDILQDLHNEKSSA
LTPPPLVTLKKKKPVGSSLNIFSIKPHVPKQEKPSSSGLKAKVIRPPPLDPSPQPSARPP
PATTEVLPEKHEAELEEPNEEREDNSLAFEGVDFDEPMEVEHEEEKAVSKDEAKLEPEGG
LTATEVKVEHKAERQDPVLLPNRVGSSWGQEAAGGVSEAPAEVQVDSSKLPLVEGPDGEQ
VFRFYWLDAFEDPYNQPGVVYLFGKVWIESAQSHVSCCVTVKNIDRTMYLLPREFKTNPK
TGAVSDQPVGMMDVYQEFNELSEKFKIMKFKSKKVEKSYAFEIPDVPSQCDYLEVRYSAD
FPALPSDLKGTTFSHVFGTNTSSLEHFLLSRKIKGPCWLDIKAPQLMNQPVSWCKVEALA
VRSDLVSVIKDLQPPPITIMSISLKTVQNPKTHHNEIVSLVALIHYSFHMDKAPPQPPYQ
THFCVISKPSDCIFPYDFKDAVKKKKVKVEMATSERTLLGCFLAKMHKIDPDVLVGHDIF
GFDLEVLLQRINVCKVPHWSKIGRLRRANMPKLGGRGAFAEKSATCGRLVCDVEISAKEL
IRCKSYHLTELAAQVLKVERVTVPQESIRNLYSDSPHLLYLLELTWTDAKLILQIMCELN
VLPLALQITSIAGNVLSRTLMGGRSERNEFLLLHAFHDKNFIVPDKPSFKKAHLDTVEGE
DDVDAGKGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQRQA
QNSHKKTDDDEPEEIPEIPDSNLEMGILPKEIRKLVERRKHVKQLMKQQDINPDLYMQYD
IRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDT
DSIMINTNSKSLEEVFKLGHKIKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEQH
GEGRYSVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSRDVIVENIQKHLVEVGEKV
ANGNIPLNQYEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTISYLICKDG
STLAASQRAYALEQLQKQEGLSVDTQYYLAQQVHPVVSRICDPIDGIDAVLIASWLGLDP
GQFRSQQQHQREEEADGTLGAAAQLNDEERYKDCERFTFTCPQCGTDNIYDSVFEGAGDR
AEPSLMRCCHIPCTNSPINNVVNMSNKLQLDIRRHIKKYYSGWLVCEDQACQNRTRRLPI
AFSRHGPICPACTRATLRAEYSEKALYNQLCFYSYIFDWDYAMAKLPNTVHKTSLKKSSS
TRQVYLKLKEVPDRALATSGYSEVNLAKLFQAFSSFK
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggctccggttgcagacccagataaagacatggaggttccggacggtgatgagaagggc
gatgcctgcggtctggccaaatctcgctccagacgagagaagcgggagaaggtgggcagg
aagtctgccctggagcagctcaagaaggccaaaaagggggaaaagatcaaatatgaggtg
gaggagatcaccagcgtgtacgaagaggtggacgagcagcagtactcgaaaatggtgcga
gagaggcaggaggacgactggattattgacgatgacggcacaggatatgttgaagacggg
cgagagatcttcgacgatgatttagacgatgatgttgtagaaagcaaaggaaaagggggc
gcaaaagggggagagtcaaagaaaactctgaagaaatcttctgtagcgaagcctaacact
attaagagtctcttcatgaacagcaatgttaagaggcctgcagagaaagatgtagatctg
tccaaagatgacttgttaggggatattttacaagatctacacaatgagaaatcttcagct
ctcactcctccacctttggttaccctgaagaaaaagaagccagtgggatcaagcttgaac
atcttctccatcaaacctcatgtgccaaagcaggagaagccctcatcttcggggttaaaa
gccaaggtgatccgacctccgcctctggacccctctcctcagccgtcagcccgtcctcca
cccgcaactaccgaggttcttccagaaaaacatgaagcagagctggaggagccaaacgaa
gagagagaggacaacagtctggcttttgagggggtcgattttgatgagccaatggaggtt
gagcatgaggaggagaaggctgtatctaaagatgaagccaaacttgaacccgaaggaggg
ttgacagcgactgaagttaaagtggagcacaaagctgaacgtcaggatccagttctgctg
cccaacagagttggaagctcttggggacaggaggcagcaggtggagtcagtgaagctcca
gcggaggtgcaggtcgactccagcaagctccctctggtggaaggcccagatggggaacag
gtcttccgattctattggttggatgcttttgaagacccatacaaccaaccaggcgtggtg
tatctgttcgggaaagtgtggatcgagtcggcgcagtctcatgtcagctgctgcgttact
gtgaagaacattgacagaacaatgtaccttcttcctcgggaatttaaaacaaatccgaaa
accggagccgtgtcggaccaaccagtggggatgatggacgtttaccaggagttcaacgag
ctttcggagaagttcaagattatgaagtttaaatctaagaaagtggagaagagctatgct
tttgaaattcctgacgtgcccagtcagtgcgactacttggaagtgagatattctgcagac
tttcctgctttgccatctgaccttaaagggacgacattttcccatgtttttggaacaaac
acctccagcctggagcacttccttctcagtaggaagataaaaggcccctgctggttggac
atcaaggcaccacagctgatgaaccaaccggtcagctggtgtaaggtggaggctctcgct
gtgagaagtgacttggtttctgtgattaaagatctgcagcctccacccataaccataatg
tccataagcctcaagacggttcagaaccccaagacgcatcacaatgagatcgtgtctctt
gttgcgctcatccactacagcttccatatggataaagctcctcctcagcctccctatcaa
actcatttctgtgtgatcagtaaaccatctgactgcatttttccttacgacttcaaagat
gctgtcaagaagaagaaagtgaaggtggagatggcaacttcagagcggaccttgctcggc
tgcttcctggccaagatgcacaaaattgaccctgatgtgttggtgggtcatgatattttc
ggctttgatctggaagttctcctgcagaggatcaatgtgtgcaaggtcccccactggtct
aagattggacgcctcaggagggcaaatatgcccaaattggggggccgtggagcatttgct
gagaagagtgcaacgtgtggccgtctggtgtgtgacgtggagatctcggccaaagagctg
attcgttgtaaaagttatcatctgacggagctcgcagctcaggtactgaaggtggagcgg
gtcacagttcctcaggaaagcatcagaaatctctacagcgactctcctcacctgctatac
ctgctggagttaacatggactgacgcaaagctgatcctccagatcatgtgtgagcttaat
gtgctgcccctcgccctgcagatcaccagcatcgccggcaatgtcctgtctcgcacacta
atgggtggtcgctctgagaggaacgagttcctgctgcttcatgccttccacgacaaaaac
tttattgtccctgacaaaccgagctttaaaaaggcccatctggacactgttgagggagag
gacgatgtagatgcaggaaagggtaagaggaagaagaaggcagcctacgcaggaggtctg
gtgctggatccgaaagtcggtttctatgataagtttgtgctgctgctcgacttcaacagc
ttgtacccttcaatcatccaagagttcaacatttgcttcaccactgtacagaggcaggca
cagaactcccacaaaaagactgatgatgatgagccagaggagattcctgagattccagat
tccaacctggaaatgggaatcctgcccaaggaaatcagaaaactggttgaacggcgtaaa
catgttaagcagctcatgaaacaacaagacatcaatccagatctctacatgcagtacgac
atccgtcagaaggccttgaagctgactgctaacagcatgtacggctgtcttggattcagc
tacagccgcttctatgctaaaccacttgctgctctggtcacccacaagggaagagagatt
ctgatgcacaccaaagacatggttcagaagatgaacctggaagtcatttatggagacaca
gactcaatcatgatcaacacgaacagcaaatcactggaggaagtcttcaaacttggacat
aagataaaggcagaggtcaacaagctctacaaactcctggagatagacatcgatggtgtt
ttcaagtctcttttgctgctgaagaagaagaaatatgccgccctggtggtggaacagcac
ggcgaggggcgatacagtgtgaagcaggagctcaaaggcttggacattgttcgcagagat
tggtgtgacctggccaaggagtgtgggaactacgtgattggtcagatcttgtcggaccag
agtcgagatgtcattgtggagaacatccagaagcatctggtggaggttggagagaaggtg
gcaaacggaaacataccactcaaccagtatgagatccacaaggcactgaccaaggaccct
caggactacccagataagaagagtcttcctcatgtgcacgttgctctgtggataaactca
cagggaggtcggcgtgtcaaagccggagatacaatctcatacctcatttgcaaggatggc
tccacgttggcggccagtcagagggcctacgctctggagcagcttcagaagcaggagggt
ctcagcgtggacacacagtattacctggcccagcaggtccaccctgtggtttctcgcatc
tgcgaccccattgacgggattgatgcagtgctcatagcctcatggttgggtctggaccca
ggtcagttcagatcccagcagcagcatcagagggaggaggaggccgacggcacgctggga
gcggcggcccagctgaacgacgaggagcgctacaaagactgcgagaggttcaccttcacc
tgcccccagtgtggcaccgacaacatctacgacagcgtcttcgaaggagcgggtgatagg
gctgagcccagtttgatgcgctgctgtcacatcccttgtacaaacagtcccatcaacaac
gttgtcaacatgagcaacaaactgcaactcgacatccggcgccacatcaaaaaatactac
tctggctggttggtgtgcgaggaccaggcctgccagaacagaaccaggcgcctgccgatc
gccttctcccgacacggacccatctgcccagcctgcacccgtgctacgctcagagctgag
tattcggagaaggccctgtacaaccagctttgcttctacagctacatcttcgactgggac
tacgccatggccaaacttccaaacactgtccacaaaacgtctttaaagaaatcaagctcc
acacggcaggtgtatctgaagctgaaggaagtcccagacagggctttggccaccagcggc
tactctgaggttaacttggccaaactcttccaagctttctcgtcgttcaaatga
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