Xiphophorus couchianus (Monterrey platyfish): 114137148
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Entry
114137148 CDS
T05908
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114137148 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114137148 (nup93)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114137148 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TarH
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
114137148
NCBI-ProteinID:
XP_027861524
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All DBs
Position
2:4468492..4483468
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AA seq
820 aa
AA seq
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MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLAAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSEAAAPGRSALNS
VEVAYGRQIYVFNEKIVSGHIQPSLGDLCAAAATTMDDKNVSDLWLMVKQMADVLLVPAR
DTLKSRTAVEMQMAFIRQALGFLENRYKSFTMGTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEVEGQPVWAIIYYCLRCGDMNAAMTVVSRAQHQLGDFKSWFQEYMSSP
DKRLSPASENKLRLHYRRVLRNSADPYKRAVYCLIGKCDVNDSHGEVADKTDDYLWLKLN
QVCFDDDSSSSPQDRLTLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGKLEKDGSRKPGIID
KFAGDTRTIISKVALEAENKGLFEEAVRLYELAKNPDKVLELMNRLLSPVIAQVSAPQSN
KERLKNTAVVIAERYRSQGTAAEKSISSTFYLLLDLMTFFDEYHAGHVDRAYDVMERLKL
LPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAPAGTPGRSPRSAE
DRGTQLRLQARALITFAGTIPYNMAGDTNARLVQMELLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagaaggctttggggagctgctgcagcaggccgagcagctggctgcagaaacc
gaagctgtgtctgagctgccgcacgttgagaggaacctccaggagatccagcaggctgga
gagcggctccggtccagaactctgacacggacctcccaggatgcagctgacgttaaagcc
tctatcctgcttgggtccagaggcctggacatcttccacatctcccagagactggagagt
ctgagtgctgccaccaccttcgagccgctggagccggtcaaagacaccgacattcagggc
ttcctgaagaacgagagggacaacgctctgctggccgccatcgaggagtcccgccgcagg
accttcctgctggctgaggagtaccaccgggagtccatgctggtccagtgggagcaggtg
aagcagagggtgctgcacacgctgctgggggccggagaagacgcgctggacttcagccag
gatgtggagcccagctttgtgagcgaggcggcagctccgggccgcagcgccctgaacagc
gtggaggtcgcctacggacgccagatctacgttttcaacgagaagatcgtcagcggacac
atccagcccagcctgggggatctgtgcgctgccgccgccaccaccatggacgacaagaac
gtgtcggacctctggctgatggtcaagcagatggccgacgtgctgctggttccggccaga
gacacgctgaaaagtcgcaccgccgtggagatgcagatggccttcatacggcaggcgctc
ggcttcctggagaaccggtacaagagcttcaccatgggaaccgtgttcggcaacctgcat
caggcacagctgggcggtgtgcccggcacctaccagctggtccgaagcttcctcaacatc
aagctgccagggccgctgccgggcatgcaggacggcgaggtggagggccagccggtctgg
gccatcatctactactgcctgcgttgcggcgacatgaacgccgccatgacggtggtgagc
cgggcgcagcatcagctgggagacttcaagtcctggttccaggagtacatgagcagccca
gacaaacgcctgtctccagcgtcagagaacaagctccgcctccactaccgcagagttctg
aggaacagcgccgacccttacaagcgggccgtctactgcctgatcggcaagtgcgacgtc
aacgacagccacggggaggtggcggacaagacggacgactacctgtggctgaagttgaac
caggtctgcttcgacgatgacagcagcagctctcctcaggaccggctgacgctgccgcag
ctgcagaagcagctgctggaagactacggagagtcccatttctcggccagccagcagccc
ttcctgtacttccaggtgttgttcctgacggctcagttcgaggcagccgtggccttcctg
tttcgggtggagcggctgcgcagccacgccgtgcacgttgccctggtgttgtacgagctg
cggctgctgctgaagtcgtcgggtcagagcgcccagctgctgagccaggagcctggagac
ccgcccatggtccgccgcctcaacttcatccgcctgttgatgctctacacgcgcaagttt
gagtccaccgacccgcgggaggccctgcagtacttctacttcctgcgcaacgagaaggac
agccagggggaaaacatgttcatgcgctgcgtcagcgagctggtcatcgagagtcgagag
ttcgacatgctgctaggaaagctggagaaagatggcagcaggaagcccgggatcatcgat
aagtttgcaggcgacaccagaaccattatcagcaaagtggctctggaggccgagaacaag
ggtctgtttgaggaggctgtgaggctgtacgagctggccaagaacccagataaggttttg
gagctgatgaacaggttgctgagtccagtcatcgctcaggtcagcgctccgcagtccaac
aaggagaggctgaagaacacggccgtggtgatcgccgagaggtatcgctctcagggcaca
gctgctgagaagtccatcagcagcaccttttacctgctgctggacctcatgaccttcttc
gacgagtaccacgcgggtcacgtggaccgagcctacgacgtgatggagcgcctgaagctg
cttcctcttagccaggacagcgtggaagaacgagtggcggccttcaggaacttcagcgat
gaggtgcgtcacaacctgtctgaagttctgctggccaccatgaacatcctgttcacccag
tacaaacgcctgaagggggcgccagcgggaacaccgggccgctcgcccagatccgcagag
gaccgaggcacgcagctgcgccttcaggcccgagcgctcatcaccttcgccgggacgatt
ccctacaacatggccggggacaccaacgccaggctggtccagatggagctgctaatgaac
tga
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