Xiphophorus couchianus (Monterrey platyfish): 114137192
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Entry
114137192 CDS
T05908
Name
(RefSeq) transcription factor Sox-17-alpha-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114137192
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114137192
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
PEPcase
PAT1
Motif
Other DBs
NCBI-GeneID:
114137192
NCBI-ProteinID:
XP_027861612
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Position
21:complement(8009656..8011952)
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AA seq
332 aa
AA seq
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MLFSQVAPGFQPCANPLESEDGQQMSEVRSPGSGPSSPLSVHSESSCASPEPKSVPAQQR
VRRPLNAFIIWTKEERRRLAQLNPDLENTDLSKILGKTWKAMPLAEKRPYMQEAERLRVQ
HTIDYPNYKYRPRRRKQLKKSPKTLSAEASPLCSSGFSIPYNLTYLLQNHHHHHHQQQQQ
QQQQQQQQQQQQQAFHISPPFPHSSLHSNRYINPAVPDSEAATAADSFSSVPAVRSNPPG
YQPQPQAYFSSQQRYMQHGFSSSTAPLMDQRESRLYGLQQCPTGPSLEFYLEQVQLDMLY
DLDRSEFEQYLGPKHHGSEPAEQSSYRGGCSV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcagccaggtggcccctggtttccagccatgcgcaaacccgctggagagcgag
gacggacagcaaatgagcgaggtgcgctcccccggttcgggaccctccagtcccctgtct
gtccactcggagtccagctgcgccagcccagagccaaagtctgtcccggcgcagcagagg
gtcaggaggccgctgaacgccttcatcatctggaccaaagaggagcgcaggcggctggcg
cagctcaacccagacctggagaacaccgatctcagcaaaatacttggaaaaacatggaag
gctatgcccttggctgagaagcgtccctacatgcaggaggctgagcgcctgagggtccag
cacaccattgattatcccaactacaagtacaggccccgtcggcggaagcagctgaagaag
agccctaagaccctgtctgcagaggcctcaccactctgcagctctggcttcagcattccc
tacaacctcacctatttgctccagaaccaccaccaccaccaccaccagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcaggccttccacatctcacctcct
ttccctcattcatccctccactctaacagatacatcaacccagccgtccctgactctgaa
gcagccactgcagcagacagtttctccagtgtccctgctgtgcgctcaaaccctcctggg
taccagccgcagcctcaggcgtactttagctcccagcaaagatacatgcagcacgggttc
tcctcgtctacagctcctctcatggaccagagggagtccaggctctacggactccagcaa
tgcccaacagggccttctttggagttttacttggaacaggttcagctggacatgctgtat
gatttagaccgcagcgagtttgaacagtaccttggtccaaaacaccacgggtcagagcca
gcagagcagagcagctacagaggaggatgctctgtgtga
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