Xiphophorus couchianus (Monterrey platyfish): 114137352
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Entry
114137352 CDS
T05908
Symbol
brpf1
Name
(RefSeq) peregrin
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114137352 (brpf1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
114137352 (brpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
zf-HC5HC2H
Bromodomain
PWWP
PHD_2
PHD
PHD_NSD
Metal_resist
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
114137352
NCBI-ProteinID:
XP_027862079
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Position
1:complement(20376405..20391372)
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AA seq
1285 aa
AA seq
DB search
MGLDFDVKTFCHNLRATKPPYECPVETCRKVYKSYSGIEYHLYHYDHDNPTPAPAVPQKK
RKGRPPRASLTASGDTDDIGGSGGGGPSPEANAPGSPNRSDHSHSPGRETMTYAQAQRMV
ELEIQGRIHRISIFENIDVVSEEDSDAEDAPPSGAGSFGGGVCNGSDSGAGGSEVGGSGK
DRSDIPSSNGGKATPKTGKHKSKDKKKDGSSHHHNPQSGLAVKLPEAVFRELDQERPDAP
ARTLSYYRYIEKSVEELDEEVEYDMDEEDYIWLGIMNDKRRRDGVTPIPQEVFEYLMDRL
EKESYFESHNKADPSTLIDEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPE
GQWLCRRCLQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPID
SIEHIPAARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETGAN
GTSFSVRKTAYCDIHTPPGSARPLAGVGGASMGSSNSEGELEDDDEPSLGQDEDSKGWSS
ERAKRAKAKSRLKMKRARKILAERRAAAPVVSVPCIPPHRLSKITSNLTVPRKSQFMQRL
HSYWTLKRQSRNGVPLLRRLQTHLPSQRHVEPNPPQPAAQLPPRDNEEKQTALKEQLKAW
QRLRHDLERARLLVELIRKREKLKRETIKVQQMALEMQLTPFLVLLRSTLEQLQERDTNN
FFTEPVPLEEVPDYLEHIDTPMDFQTMWNLLESHRYLTFEAFEADFGLIVNNCLKYNAKD
TVFYRAALRLREMGAVVLRAARRQAERIGFDYESGMHLHRDSSPESQREPERDRDRDRER
DREQDRDRPLSSNEDDLLLPENRRRLPLDEQLHYLQARLDEVNSGKHSIGQSRRAKALKK
EISVIRRKLAHQREVGSIMGGRESAGDRSSSLPHHSSSVGHHDEGGESSSQEIGGKAPEV
GRRTSVLFSKKNQKMAGPPKRPGRPPKNRDMGYAGPGVSQSPIGPPQLPLLSNSRPRKRP
RTPHSTSSSDSDSDNDDLLPGLPSNGFDTGNQPVTESFRVYRNEPRLPRSSSDSESTTSS
SSSAASDRTSTTPSKQGRGKASFSRSTFHEDSSEETSGTENDSYSVGGSRSVSHLVRGRD
RSGCWMTSDDYSSLEALDLVWAKCRGYPSYPALIIDPKMPREGVFHRGVPIPVPPLDVLK
LGEQMTQEAREHLFLVLFFDNKRTWQWLPRSKLVPLGVDQELDKEKMLEGRKSNIRKSVS
VAYSRAMQHRSKVQGDPSSETSDSD
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggggctagattttgatgtgaagacattctgtcataatcttcgggccacaaagccaccg
tatgagtgtccagtggagacttgtcgtaaggtttacaagagttacagcggcatagagtat
cacctctaccactatgaccatgacaacccaactcctgctcccgctgtgccccagaagaag
aggaagggccgtcctcctcgtgcctcgttgaccgcctctggggacacggacgacattgga
ggcagcggaggtggaggacctagtcctgaagcaaacgcacctgggagccccaaccggtcg
gaccattctcactcccctggcagggagacaatgacctacgctcaggcgcagcgcatggtg
gagctggagattcagggacgcattcaccgcatcagtatctttgagaacattgatgtggtg
tccgaggaagacagcgatgccgaggacgcaccaccatctggcgcaggcagttttggagga
ggggtttgtaacggcagtgacagtggagccgggggcagtgaagttggaggaagcgggaag
gaccgctctgacatcccgtcctctaacggcggtaaagccacgccaaagactgggaagcac
aaaagtaaagataagaagaaggacggttcatctcaccatcacaacccgcagtccggtctt
gctgtcaagcttccagaagcagtgtttagagaactggaccaagaaagacctgatgcccct
gctcggactttatcctactacaggtacattgagaagtctgtggaagagctggatgaagag
gttgagtacgacatggacgaagaggactacatctggctcggcatcatgaatgacaaaagg
cgacgtgacggagtgacgccaatccctcaggaggtctttgaatacctcatggaccgctta
gaaaaggagtcctactttgagagccacaacaaggcagaccccagtacgttgatcgacgag
gatgccgtctgctgcatctgcaatgacggcgagtgtcagaacagcaacgtgatcctgttc
tgtgacatgtgcaacctggcagtgcaccaggagtgctacggcgttccctacatcccagag
ggtcagtggttgtgtcggcgctgcctgcagtcgccgagcagagcggtggactgtgctctg
tgtcctaacaagggcggggctttcaaacagacggatgacgggcgctgggctcatgttgtc
tgtgcgctttggatcccagaggtctgctttgcaaacacggtctttctggagccgatcgac
agcatcgagcacatccctgccgcccgctggaagctcacctgctacatctgcaagcaacgt
ggctcaggcgcctgcatccagtgtcacaaagccaactgttacacagccttccacgtcacc
tgtgcccagcaggcaggcctctacatgaagatggagccggtcagagaaacgggggctaac
ggcacatcgttcagcgtgcgcaagacggcgtactgcgatatccacacaccgccggggtca
gccaggcctctcgctggagtgggcggggccagcatgggctcgtccaacagcgaaggggag
ctggaggatgacgacgagcccagtctcggccaggacgaagactccaagggctggagctct
gagcgggccaagagggcgaaggcgaaatccaggctgaagatgaagagagcgaggaagatc
ctggcagagaggagagctgctgcaccagtggtgtctgtgccctgcatacctccccacaga
ctcagcaaaatcacaagtaatctgacggtgcccaggaagagtcagttcatgcaacgactc
cacagctactggacgctgaagaggcaaagtcgaaatggcgttcctcttctgcggcggctc
cagacccacctgccatctcagcgccatgtggagccgaatccaccacagcccgcagcacag
cttccccctagggacaacgaggagaaacagacagccttaaaggagcagctgaaggcctgg
cagagattgagacatgacctggagagagccaggctgctggtggagctcatccgcaagagg
gagaaactcaagagggagacgattaaagtgcagcagatggcgctggagatgcagctcact
cccttcctggtgcttctcaggagtacgttggagcagttacaggaaagagacacaaacaac
tttttcactgagcctgttccccttgaagaggtgccggactacctggagcacattgacact
cctatggacttccagaccatgtggaacctgctggagtcccatcgctacctcacgtttgag
gccttcgaggccgactttggcctcattgtcaacaactgcctcaagtacaacgccaaggac
acagtgttttaccgagccgccctgcggctcagggagatgggcgccgtcgtcctcagagcg
gccaggcgccaggccgaacggatcggcttcgattatgagtcaggcatgcatcttcatcga
gactcgagcccagaaagccaacgtgagccagagagagacagagacagagacagagagcgg
gacagggaacaggacagagacagaccgttgtcctctaatgaagacgacctgctgctgcca
gagaacaggcgacggctgccgctggacgagcagctgcattacctgcaggcgcgccttgat
gaggtcaattctgggaagcacagcatcggccagtctcgcagggccaaagccctgaagaag
gagatcagtgtgatccggaggaagctggcgcaccagcgggaggtgggctccatcatgggg
ggccgtgagtcggcgggggatcgcagttcttctctcccgcatcactcttcatctgtggga
caccatgatgaggggggagagagcagcagccaggagattgggggaaaggctcccgaggtt
ggccggcggacttctgtgcttttttccaagaagaaccaaaaaatggctggacctcccaaa
agaccagggcgcccgccgaagaaccgagacatgggctacgccgggccaggggtgagccag
agccccatcgggcccccccagctccctctgctgtccaacagcaggcccaggaagagaccc
cgtaccccccacagcacctccagctccgacagcgacagcgacaacgatgacctccttcca
ggtttaccgagcaatggctttgatacaggaaaccaacctgtgactgaaagcttccgtgtg
tacagaaacgagcctcgtctgcctcgatccagctccgactccgagtccaccaccagcagc
agcagcagcgccgcttctgacaggaccagcactacgccctctaagcaaggcagaggaaag
gcgtcattctctcgttccaccttccatgaggacagcagtgaggaaacgtcgggcacagaa
aatgattcctactcagttggaggatcacggagcgtttcacacttggtgcgtggccgggac
cggtcaggatgctggatgacgtctgacgactactcctctctggaagctctggatctggtc
tgggccaagtgcagaggctatccttcgtatcctgctctgatcatcgacccaaagatgccc
agggagggcgtgttccaccgcggagtcccaatacccgtacctcctttagacgtgctgaaa
ctcggcgagcaaatgacccaagaagcccgggagcacctgttcctcgtcctctttttcgac
aacaaaagaacctggcagtggctgccacgatccaagctggtgccgcttggtgtggaccaa
gaactagacaaggagaagatgcttgagggcaggaaatccaacattcgtaaatccgtttcg
gtggcctacagtcgtgccatgcaacaccgcagcaaagtccagggagaccccagcagcgaa
accagcgacagtgactga
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