Xiphophorus couchianus (Monterrey platyfish): 114137551
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Entry
114137551 CDS
T05908
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
114137551
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114137551
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
114137551
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
114137551
NCBI-ProteinID:
XP_027862005
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Position
22:complement(10244117..10410124)
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AA seq
1338 aa
AA seq
DB search
MLAEAHGTDPHGSDSSMRTSSIDNNNNPDSSILISKMEGVVIPYTSEVPCDDYGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKHKEAQKVNNPANNPTADKTTKGPDE
KEEAAASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFENSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLK
LLLIAIEFKSEQRESRSRKRILINPGNHVKLQEGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRLIYSKMSVYKRMKLACCFDCGRSERDCSCMSGSVHSNMDTLQRAYP
LSSVSVHDCATTLRAFSSAKYKYNGFVRSPADGATTPRNSGSQKEAGVRFKADCNLVEDE
HPSTLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIENMDMNVKRYDSTGMFHWC
PSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIV
FVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIEDASL
QDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSPVHGFVRQASVTTGSN
IPIITELAKPGKLLPLVSLSQESKSGTSIQMITELVNDSNVQFLDQDDDDDPDTELYLTQ
PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQ
TLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLGTPSQ
CTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSVP
PSNRQNRSSKSREAREKQNATRMNRMGQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQ
YKSTSSLIPPIREVEDEC
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgctagccgaggcacatggcacggatccccatggaagcgacagctctatgaggacaagc
agcatcgataataacaacaatccggactcttcgatcttaatatccaagatggaaggcgtt
gtcatcccctacacgtctgaggtgccatgcgacgactatggacagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgtttttcgggggtctcttcatcatcctgctatggagg
accctgaagtatctgtggactgtctgctgccactgcaacataaaacataaggaggctcaa
aaggtgaataaccctgccaacaatccgacagcagacaagacaacaaaaggtcctgatgag
aaggaggaggcagcagccagcgaggtgggatggatgacttcagtcaaagactgggctggt
gtcatgatctccgctcagacactcacaggcagggttctggtggtgttagtctttgctctc
agcattggagcccttggaatatactttatagactcctcagatcctatagaatcctgccag
aacttctacaaagattttacactacaaatcgatatggccttcaatgtcttcttcctcctg
tactttggcttgcggtttatagcagccaatgacaagctgtggttctggctggaggtcaac
tcagtggtcgacttcttcaccgttcctcctgtgttcgtctctgtatacctaaacagaagc
tggcttggtttaagatttctgagagcactaagactgattcaattctcagaaatattacag
ttcctaaatattttgaaaacaagcaattccatcaagctggtgaacttgtgttccatcttt
ataagcacgtggctcacggcggctggatttatacatctggtggaaaactcaggggatccg
tgggaaaactttgaaaattcccagtcgctgtcttattgggaatgcgtctacttgctgatg
gtgacgatgtctacagtgggttacggggatgtctatgcaaaaaccaccctgggccgcctg
ttcatggtcttcttcatccttggtggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccattttactcaagtcgagttctaccag
ggatcggttctcaaccctcatgatttggcccgagtgaagatcgagtcagcggatgcctgt
ctaattttggccaacaaatattgtgcagatcctgatgctgaagacgcttctaacatcatg
agggtcatatccatcaagaactatcatcccaagatcagaataataacacagatgctacag
tatcacaataaggcccatctgctgaacattcccagctggaactggaaggaaggtgatgat
gctatatgcctggctgagctgaaggctggtttcattgcccagagctgtctggcacagggc
ctgtcgaccatgctggccaatctcttctccatgaggtccttcattgagattgaggaggac
acatggcagaagtattacctagaaggagtagctaatgagatgtacacagagtatttgtcc
agtgcctttgtaggcctctccttccccactgtgtgcgagttgtgctatgtgaagttgaag
ctgttgcttattgccattgaattcaagtctgagcagagagagagcagaagccgaaagcgc
atcctcatcaatccaggcaatcacgtcaagctgcaggagggaacactgggattctttatt
gctagcgatgccaaagaagtaaagcgagcatttttctactgcaaagcttgtcacgatgac
atcacagaccccaaaaggatcaaaaagtgcggctgcaaacgactgatttattccaagatg
tccgtctacaaacgaatgaaactggcatgttgttttgattgcggccgttcagagcgagac
tgctcttgcatgtcaggcagtgtacatagtaacatggacacccttcagagggcctaccca
ctttcctctgtctctgttcatgattgcgcaaccactttacgtgccttctcctcagctaaa
tataagtataatggatttgtcagatcaccagcagatggcgctacaacaccacggaacagt
ggaagccaaaaagaggctggcgttcgattcaaagctgattgcaatctagttgaggatgag
catccatcgactctctcacccaaaaaaaagcagcgcaatggggggatgcgaaactcgccc
aactgctcgcccaaaatgatgagtcgacatgatcccctcctaattcctggaaatgaacaa
attgagaacatggacatgaacgtcaagaggtacgactcgacgggaatgtttcactggtgc
ccttccaaagaaatcgagaaagtcatcctgactcggagcgaagcctccatgactgtgctg
agcggccatgtagtggtctgtatatttggggatgtcacgtccgctttggtggggctgcga
aacctggtgatgcctttaagagccagcaattttcactaccatgaactaaagcctatagtt
tttgtgggctcgctggattaccttcggagagagtgggagactttacacaacttccccaag
gtctccatcttacctggtacaccattaagtcgggcagatttaagggctgtcaacatcaac
ctctgtgacatgtgcgtaatactgtcagccaatcagaacaatatcgaagatgcctctctg
caggataaggaatgcatcttggcatcactcaacatcaagtctatgcagtttgatgacagc
attggggtcttacaggctaattcccaaggtttcacgcctcctggaatggacaggtcatct
ccagacagcagtccagtacatggctttgtgcgtcaggcttcggtaaccaccggatccaac
atccccatcatcacagagctagctaaacctggcaaactactgccattggtttctctcagt
caggaaagtaaaagtggaaccagcatacaaatgataacagagctggtgaatgactcgaac
gttcagttcctggaccaagacgatgacgacgacccagacacggaactgtacctcactcag
cccttcgcctgcggcaccgcctttgccgtcagtgtactcgactccctgatgagtgcgaca
tacttcaacgataacatcctcacactaatccggacactagtcacgggaggagccacgcca
gagctggaggccctgctggctgaggagaacgctctcagaggaggctacagcacgccacag
acgctggccaacagagacaggtgtcgcgtcgcccagctggccctgtatgacggcccgttt
gctgacttaggggacggtggctgctacggtgacttgttctgtaaagccctgaaaacatac
aacatgctgtgttttgggatctacagattaagagatgctcatctcggcacaccaagccag
tgcacaaaacgatatgtgatcacaaaccccccgtacgagtttgaactggtgcccacagac
ctgatcttctgcctcatgcagtttgaccacaatgctggccagtcacggacaagcttatcc
cactcttcccactcctcccattcctccagcaaaaagagttcctctgtgcactcggtgcct
ccctccaaccggcagaaccgcagcagtaagagcagagaggcaagggaaaaacagaatgca
acaaggatgaatagaatgggccaagaaaagaaatggtttacagatgaaccggaaaatgcc
tacccaaggaacattcagatcaagcccatgagcactcacatggccaaccaagtcaaccaa
tacaaatccactagtagcctgattccaccaatcagagaagttgaagatgaatgctga
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