Xiphophorus couchianus (Monterrey platyfish): 114137625
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Entry
114137625 CDS
T05908
Name
(RefSeq) B-cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04371
Apelin signaling pathway
xco04514
Cell adhesion molecules
xco04520
Adherens junction
xco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
114137625
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114137625
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114137625
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114137625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114137625
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114137625
04090 CD molecules [BR:
xco04090
]
114137625
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
114137625
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Major cadherins
114137625
CD molecules [BR:
xco04090
]
Proteins
114137625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
114137625
NCBI-ProteinID:
XP_027862158
LinkDB
All DBs
Position
22:complement(848691..962026)
Genome browser
AA seq
920 aa
AA seq
DB search
MYGFRVMNKKTYVLHRGQKCIAGSQEDRRYLSTLSNGPFSKSQASPAGRTEDQICEPGFD
SESVIFKVTEKHLRPTTIVGKVNFTDCTDVTRLIFTTYDSHFYVETDGTVTVSRWLVLQE
GQRRFYIHSWDSKGKKRTVSVVVQYQGDHDAAHSIQSDFPLKDITNNLEDAPQVPILYFP
KSNPGLKRRKRGWVVPPLNVAENHRGPYPLALARIRSDFDKVKKIQYKITGPGADEFPVG
LFTMDRNTGELYVTQELDREKQDKYMLFAHAEAAGGVTNVEEPMEIIINVIDQNDNKPVF
NQSTYKGEVPEASTKGFDVIQVVATDADEPNTDNSDIRYRIMSQKPEDPSPNMFTINPAT
GAIRVNEAGLDREKVPKYELEVMVADMKGEGLAGFTKVIIRVTDSNDHAPVFTESRYEAT
VEENKVDALVVKMLVKDGDEPHTMAWNAKFSIIDGDPGNLFTVETGTNKQEGIISTAKGL
DFERTSKHTLLVTVENEAPFAVPLVTSTATVVVTVEDVNEPPIFDPKEKHVSKREDLAEN
STVVRYTATDPDVGRKQKVMYKILDDPAGWLVIDKGTGEIKVRNQMDREDNAVKENKYTA
LIGGYDDDDQIPATGTGTLIITLEDVNDNPPSVDDRLVKMCNKKPVPQLLSVTDKDGPGF
TFPYSVTLQDSAKTNWTARMNDNKTGIVLTLTRELESGTYKVGMKVSDNQGLFQLNTIEA
EVCDCTGEEVRCIEKVIAGSSMPVILGILGGVLLLLMLVLLLLLLANKNKPKKGQPLLLD
NDIRDDIFCYDEEGGGEEDQDYFDLGVLHRGLDNRPHVFRDEVAPVFQTRPVVYKPRPAN
PEDIGGFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSEAGSISSLNSSSDGDQDYDCLSD
WGPRFKKLADMYGGGDDDMM
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtttcagagttatgaacaaaaaaacctatgtcctccacagaggacaaaaatgt
attgctgggtctcaggaggatagaagatatttatcaacgttgtcaaatggtcctttttca
aaaagtcaggcttcaccagcagggcgcacagaagaccaaatatgtgaaccaggatttgac
tcagaatcagttatttttaaggtgactgaaaagcatctgaggccaaccacaatcgtggga
aaagtgaacttcaccgactgcacagatgtcacgaggcttattttcaccacttacgattcc
catttctatgttgagactgatgggacagtaacggtttcgagatggttggttcttcaggag
ggacaacgacgtttctacatccactcctgggattcaaaaggcaagaaacggactgtctct
gttgtggttcagtaccaaggggatcatgacgcagcccacagcatccagagtgattttccc
cttaaggacatcacaaataacttagaggatgctccacaggttcccattctgtatttccca
aaatctaatccaggactcaagaggaggaagagaggctgggttgtccctcctcttaatgtt
gctgaaaatcacagaggaccttatccccttgctcttgctcggattcgctctgatttcgat
aaagtgaagaagatccagtacaaaatcactggtcctggagctgatgagtttcctgttggt
ctttttaccatggatagaaacactggtgaattgtatgtcacacaggaactggacagagag
aaacaggacaagtacatgctttttgcccatgctgaggcagctggaggtgttacaaatgta
gaggagcctatggaaattataatcaatgtaattgaccagaatgacaacaaacctgttttc
aatcagtctacctataagggagaagttccagaggcttcgacaaaaggttttgacgtgatt
caggttgtggccacagatgctgatgagccaaatactgacaactctgatatcaggtaccgt
ataatgagtcagaagccagaggatcccagtcccaacatgtttaccatcaatccagcaact
ggagccatcagagtcaacgaagctggactggaccgagagaaagtcccaaagtatgaactg
gaagtaatggtagctgacatgaagggagaaggtttggctggatttaccaaagtgattatc
agagtgacggacagcaacgatcacgctccagtctttacagagtccagatatgaggccaca
gttgaagagaataaagtagacgctctagttgttaagatgttggtgaaggacggtgatgag
cctcataccatggcctggaatgcaaagttcagcatcattgatggagatccaggaaatctg
tttactgtggaaacaggaacaaacaaacaagaaggaatcatcagtactgctaagggtctg
gactttgagagaaccagtaagcacactctactggtcacagtggagaatgaggctcctttt
gctgtccccttggtcacttccactgctacagtggtggtgactgtggaggatgtcaatgaa
cctcccatctttgatcctaaagagaagcatgtttccaaacgtgaggatcttgctgagaac
agcactgtggtgcgatacacagctactgatccagacgttggacgcaaacagaaagtcatg
tataaaatactcgatgacccagctggctggcttgtcattgataagggtactggtgagata
aaagtgagaaaccaaatggacagagaagataatgctgtcaaagagaataaatacacagca
ttgattggtggatatgatgatgatgatcagatcccagctacaggaactggaactctgatc
attacacttgaggacgtcaacgacaaccccccctccgttgacgatcgtttagttaaaatg
tgtaacaagaagccagttcctcagctgctaagtgtaacagataaagatggaccaggcttt
acttttccatacagcgtcaccttacaggactctgctaagactaactggaccgctaggatg
aacgacaacaaaactggtattgttctgactttgacacgtgagctggagagtggaacttac
aaagtgggcatgaaggtttcagacaaccagggcctgtttcagctcaacacaatcgaagct
gaagtgtgtgactgcactggagaagaagtgaggtgcatagagaaagttattgctggctcc
agcatgccagtcatcctgggaatactcggtggcgtcctcctgctacttatgctggtcctg
ctgctgctactgttggcaaataaaaacaagccaaagaagggacaacctttgctcctggat
aacgacatcagagacgacatcttttgttatgatgaggagggaggtggagaggaggaccag
gactactttgatctgggtgttctccaccgtggtttggacaaccgtccccatgtgttcagg
gatgaagtggctccagtttttcagacacggcctgttgtgtataaacctcgacccgccaac
ccagaagatatcggcggcttcattgatgataacctaaaggcggcagataacgacccgact
gctcccccctacgactccctgctggtgtttgattatgaaggaggcggttctgaagctgga
agcatttcgtctctgaactcgtcaagcgatggagaccaggactatgactgcctcagcgac
tgggggcctcgcttcaagaagctggccgacatgtacggaggaggagatgatgacatgatg
tga
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