Xiphophorus couchianus (Monterrey platyfish): 114137693
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Entry
114137693 CDS
T05908
Symbol
jag1
Name
(RefSeq) protein jagged-1
KO
K06052
jagged-1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04330
Notch signaling pathway
xco04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114137693 (jag1)
04371 Apelin signaling pathway
114137693 (jag1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xco04090
]
114137693 (jag1)
CD molecules [BR:
xco04090
]
Proteins
114137693 (jag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_DL_JAG
EGF_2
DSL
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
EGF_3
Glt_symporter
Motif
Other DBs
NCBI-GeneID:
114137693
NCBI-ProteinID:
XP_027862275
LinkDB
All DBs
Position
22:17534052..17571122
Genome browser
AA seq
1217 aa
AA seq
DB search
MILRRSSAVAAFFLLCFLVEVSQGSGQFELQILSMHNANGELPNGMCCDGARSAADRKCA
RSECDTFFKVCLKEYQSRVSAAGPCSFGMGSTPVLGGNTFSFRSPVRNDKSRIVLPFSFA
WPRSYTLIVEAWDFNNETGGSDGKLIEKASHSGMINPSPQWQKLTHNGPVAQFEYDIRVS
CDEHYYGFGCNKFCRPRDEFFGHYTCDYNGNKTCLEGWSGPECNTAICRQGCSTEHGSCK
EPGECKCLYGWQGLYCDKCIPHPGCVHGTCVEPWQCLCDLNWGGHLCDKDLNYCGTHQPC
LNGGTCINTGPDKYQCTCAEGYSGANCERAEHACLSNPCSNGGSCSETAQGYECQCAPGW
SGPSCTTNVDDCSPSPCNHGGTCQDLVNGYKCHCPPQWMGKTCLIDANECDSKPCVNANS
CRNLIGSYFCECLPGWTGQNCDTNINDCKDQCLNGGTCKDLVNGYRCTCAPGFAGEHCER
DVDECASSPCLNGGRCQDEVNGFQCLCLTGFSGNLCQLDIDYCSPNPCQNGAPCYNRATD
YFCACPEDYEGKNCSHLKDHCRTTKCKVIDSCTVAVASNSTPGGERYISSNVCGPHGRCR
SQAGGQFSCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVSVYQCICADGWEGDHCEI
NIDDCSTNPCHNGGTCRDLVSDFFCECKNGWKGKTCHSRESQCDEATCNNGGTCHDEGDT
FQCKCSPGWEGTTCNIAKNSSCLPNPCENGGTCVVKGDSFTCVCKEGWEGPTCTQNTNDC
SPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCALGSTCVDEINGYRCLC
PPDRTGLHCQDKTRKHCSSNGHVAADGASWEEDCNICHCSNGKVLCTKMWCGPKPCKLGA
KGRGGCPPDQSCMPLREAHCFVKPCLELGECWGSGLAQPRIKCHPSSSYQDNSCANITFI
LKKEIMPTGLTVEGVCKQLRNLNIVRNFSLEHSVTITCDPSFSASNEIHVCLSTEDHRLD
RNPIKEITDRIIDLVSKGNGNNTILSAIVKVQVSRPSKTDYLVPLLSSIFIVIWFLLLVS
VLLWCMRRRRKQSNHNGTLPSSSEDNTTNNVREHLNQIKNPIEKHVGLTVAIKDYENKNS
IIAKIRTNHPEGDEDDKERHLQKGRFAKQPAYTLVERDEKAPISNPNPTSKHPNWTNKQD
NRDLETANSINRMDYIV
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagacgcagctccgcggttgctgccttcttcctgctctgctttcttgtggag
gtgtcgcagggatcgggacaattcgagctgcagatcttgtcgatgcacaacgcgaacgga
gagttgcccaacggcatgtgttgcgatggcgcacggagcgccgccgatcgaaagtgcgca
cggagcgagtgcgacacgtttttcaaagtttgcctgaaggagtaccagtccagggtttcc
gctgcggggccctgcagcttcggaatgggatctacgcctgtcctcggagggaatacgttt
tctttcaggagtcctgtcaggaatgacaaatccaggatagttttgcccttcagctttgcc
tggccgaggtcctatactttgatagtggaggcctgggactttaacaatgaaaccggtggt
tctgatgggaagctgatagagaaagcctctcattcgggcatgatcaacccaagcccacag
tggcagaaactgactcacaatggcccggtcgctcagttcgagtacgacatccgggtcagc
tgcgacgagcactactacggcttcggctgcaacaagttctgccgacccagagacgagttc
ttcggacattacacgtgcgactacaatggaaacaagacctgcctggaaggctggtctgga
cctgagtgcaacacagctatttgtcgacaaggttgcagcactgaacatggatcgtgtaag
gagccaggtgaatgcaagtgtctgtatggatggcagggcctgtactgcgataaatgcatc
ccccacccgggctgtgtgcatggcacctgcgttgagccatggcagtgcctgtgcgacctc
aactggggcggccacctttgtgataaagatctgaattactgcggcactcaccagccatgc
ttgaatggaggaacgtgcatcaacacaggacctgataagtaccagtgtacctgcgctgag
ggttactctggagcaaactgtgagagagccgaacacgcctgcctctccaatccatgctct
aatggagggagctgctcagaaacagctcaaggctacgagtgtcagtgtgcgcctggctgg
agcggcccgtcctgcaccaccaatgtggacgactgctcccccagcccctgtaaccacggc
gggacgtgtcaggacctggtgaacggctacaagtgccactgtcctccgcagtggatgggg
aagacatgtctgatagacgccaacgaatgcgacagcaagccctgtgtcaacgccaactcc
tgccgcaacctgattggcagctacttctgcgagtgcctgcctggttggacggggcagaac
tgtgacaccaacataaacgactgcaaggaccagtgtctgaatggaggaacctgtaaggac
ctggtgaacgggtaccgctgcacgtgcgcccccggctttgctggcgagcactgcgagagg
gatgtggacgaatgtgccagctcaccgtgtctgaacggcggccgctgtcaggacgaggtg
aatggcttccagtgtctgtgtctgaccggcttctctgggaacctgtgccagctggatata
gattactgctcacccaacccgtgccagaacggagcgccctgctacaaccgggccacagac
tacttctgcgcgtgcccagaggactacgagggcaagaactgctcccacctcaaagaccac
tgtcgcaccaccaagtgtaaagtgattgacagctgcaccgtcgccgtggcatctaacagc
acgccaggaggagagcgttacatttcgtcaaatgtgtgtggacctcacggtcgctgccgg
agccaagcagggggtcagttcagctgcgagtgccaggagggcttccgagggacctactgc
cacgagaacataaatgactgcgagagcaacccgtgtcgcaacggaggcacgtgcatcgac
aaagtcagcgtctaccagtgcatctgcgccgacggctgggagggcgatcactgcgagatc
aacatcgatgactgcagcaccaacccctgtcataatggagggacatgtcgagacctggtg
tctgatttcttctgcgagtgcaaaaatggctggaaggggaaaacctgccactcacgtgaa
agccagtgcgatgaagctacatgcaacaatgggggtacctgccatgatgagggtgacaca
ttccagtgcaagtgttccccaggctgggagggcacgacctgcaacatagccaaaaactca
agctgtctgcccaacccgtgtgagaacggaggaacctgcgtggtgaagggggattctttc
acctgtgtctgcaaggaaggctgggagggtcctacatgcactcagaataccaacgactgc
agtccccacccatgttacaacagtgggacctgtgtggacggggataactggtaccgctgt
gaatgcgccccaggtttcgccggtccagactgtcggatcaatattaacgagtgccagtcc
tctccctgcgccttgggatccacctgcgtggacgagatcaacggatatcgctgcctgtgt
cccccagacagaactggactccactgtcaagacaaaacaagaaagcattgctctagtaat
gggcatgttgccgcggatggagccagctgggaagaagactgcaacatttgtcactgctca
aatggaaaagtgctgtgcacaaagatgtggtgcggcccgaagccatgcaagctcggcgcc
aaaggccgaggcggatgccccccggatcagagctgcatgcccctcagagaagcccactgc
tttgtgaaaccctgcctggagctgggcgagtgctggggctccggcctcgctcagcctcga
atcaaatgccaccccagctcctcttaccaggacaacagctgcgccaacatcaccttcatc
ctaaaaaaggagatcatgcccacgggtttgaccgtggaaggagtttgtaagcagctgagg
aacctgaacatagtgaggaatttttccttggagcattctgtgactataacctgtgacccg
tcgttctcggccagcaacgagatccacgtctgcctgtctactgaagaccatcgtttggat
cgcaatcccatcaaagagatcacagaccgaataatcgacctggttagcaagggcaacggg
aacaacaccatcctctctgccattgtcaaagttcaggtgtcaagacccagcaaaactgac
taccttgtgcccctcctctcctccattttcatcgtcatctggttcctactgctggtctcc
gtcttgctgtggtgcatgcggcggcggcggaaacagagcaaccacaacgggacgctgccg
agcagctccgaggacaacaccaccaacaacgtgcgggagcacctcaaccagatcaagaac
cctatagagaagcatgtgggcctgacggtggccatcaaagactatgaaaacaagaactcg
atcattgccaaaataaggacaaatcatcctgaaggggatgaggacgacaaggagaggcac
ttacagaagggccgcttcgccaaacagccagcatacacgttggtggagagggacgagaag
gcgcccatctccaatcccaacccaacatccaagcatcctaactggactaataaacaggac
aacagggacttggagacggcaaacagcataaacaggatggactacatcgtatag
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