Xiphophorus couchianus (Monterrey platyfish): 114137820
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Entry
114137820 CDS
T05908
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114137820 (cfap43)
Cilium and associated proteins [BR:
xco03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
114137820 (cfap43)
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Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_EML
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_RSE1_2nd
KNTC1_N
CFAP43_N
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_KIB1-4
MCPsignal
Motif
Other DBs
NCBI-GeneID:
114137820
NCBI-ProteinID:
XP_027862453
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Position
22:complement(9277197..9294686)
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AA seq
1615 aa
AA seq
DB search
MSEGEILEISWIQGFPRDNVEFVDNNTVCYACGSHICFLNLKTKKRRVFQSPGNGVGALT
ANGRSGTFAFSEKELDPSIFVYNFPQLELKNELKGNTQLDYTSLTLSDGEPFLASCSSIP
DFSITLWNWEKAELICTRPQGGRDVIYLEFNPMNCLQLCALGTTTLTVWNIERCGSFHLL
KPSAVQLPEIPDASSEKPTPTSTKDPNCISQILAAITEPTVATVTPSTVCWTVTSQLCVG
CAEGYLLLVDPQSLSVSVLVDPTAADAIPELKNFYFQSVVLYSSGLVAVGKESVMHCLEA
KGTQISITQTWQLERSVTTAVVSPNNSTLLLSANTGKIYVLNAETSDQIEKILDVLSGNF
LNAALHSDKNICVSLRDSGVLQLWSSNGTCLASLPLETDVTNITCCPLAHYAAVGTASGK
ILFIDLNFQKQLRLVHEVYLYHTAVDHLAFDQEGRYLLCSGLDSHLYVLDGRPSAKFSVL
GYIEVSGRILSLSTQCVNRGEDVKALALCGSQEDKKDEGSWLLMFFLPFKGIGGSFSVDR
TGCLNIPKVFKFKVQVPLTSCILGVGEAFGYCHRKKSLQRFQFPEDTFGLSSKKRAHLNP
KNEVAFQLPGRATLLLSPDCMLLASVGRQGILQLRPTSSMELYCELRCHSRRLGGIRSVS
FSTDSHMVVTTGLDDGSVLCTNIRAEAEYMSPIQRRLIRAQSLKTSFISENPILIKFPVW
DQETPVTDEQTEETKFGRAASIDVIEEDEHNFPPASTSTWLEKRHEEIVKEDEIKYADVK
KRLREEMEDLRKSVQKLMLENKTLPIKMFNLDVEGQKRMDARVEAEVQRVKAEIEQDILE
KQYQRDVLKRECWDSFLIKPRSINAFHSKLAVQNYPIKARTEKELEDIRRVQNMRTIEKA
AAKLIGLKKNNSEPEEGHVAESADNVGLPTLLAHANVYLYDQFSMQTVEQRINQIILLQD
LIYDIKMAFNSDFEALFKRKLKEIKFVVDVNKNIRDIMLELDIQQTLWEPSLTDMEWPER
LFIVEDSEIEVEKYLTPEQKAEEERLRLEKEACLAAHKDDSRQRALNDMMGGVLEVKKVD
ILKVEISPPEFSLTKPPIQWSEEEKKVYKEYEKNIKDLIEEKEKYKRGLEFEMKKLQESI
KESTEKFDESLTKLFEKKLKFTAAIYQEELKISYLAESVHMVEAMNRQESELKLKLEQLL
AQKVNIEKDLSGYKDTVEQFQFDYENILAEDKNLDKEFRKEFADLPKFLTDQLYKQFKRR
PRVQRLRAMSIDGSNLFKPIRLSTPAPDGLSQILAAMEELDAPDNMPKGLTLPVWERFCV
VRNTKIEYEQKIKVKGLELAEMQAFLERRINEDNAAQEEIKQHFEELRSLRNRRNKYLMD
PVIQVVLPQGQVETSTIDLTAETAETDFILLHKKVVDDVKEKIRKVAEQKITYMEAHGAV
RKEIIQLEWEHRVLDKKIEDLHEKKKEIKMLRLSKEDMEVLSMKDPKAHELEKISKLEKS
IAFMKQTHKRAIHRRMKKVKQINKKISMIADKSASIQKELPEMQASVAELRHIYEASATE
ANEAAEREERYQEIVQRRNLRDLARAKSDELDQLRKEVERLERRNFPSLDQLKYN
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaggtgaaatcttagaaataagctggattcaaggatttccaagagacaatgtc
gagtttgtggataataatacagtgtgttacgcgtgtgggagtcatatatgcttcctaaac
ctgaagacaaaaaaacggagagtgtttcagagtcctggcaatggcgtcggtgcgctgaca
gctaacggcagaagtggaacgtttgctttctctgagaaagaattggatccgtctatattt
gtgtacaactttcctcaactagaactgaagaatgagctgaaaggaaatacgcaactggac
tatacatctttgacattaagtgatggagagccttttttggcctcctgctcgtcgattcct
gacttctccatcacactgtggaactgggaaaaggctgagttgatctgtacacggcctcaa
ggtggacgggatgtcatttatttggagttcaaccccatgaattgcctccagctttgtgct
ttgggcaccacaaccctcactgtctggaacatagagagatgtgggtctttccatctgttg
aaaccaagtgcagtacagcttccagaaatcccagatgcctcttcagagaaaccaactccc
acttccacaaaggacccaaactgtatttctcaaattttggctgccattacagagcctacg
gtagccacagtaacaccatctactgtatgctggacagtcacatcacaactttgtgtggga
tgtgctgaaggctatctccttcttgttgaccctcagagcctctctgtttcagtccttgtc
gaccctacagctgcggatgccattcctgaactcaaaaacttctattttcaatctgtagtc
ctttatagcagtggtcttgttgcagtaggaaaggagagtgtgatgcactgtctggaggcc
aaagggactcagatcagcatcacgcaaacttggcagttagagagatctgttacgactgca
gtggtctcccccaacaacagcacactgcttctgtctgccaatacagggaaaatctacgtg
ttgaatgcagaaacgtcagaccagattgagaagatcttggatgttctcagtggcaacttt
ttgaacgctgctttgcactctgacaagaacatttgtgtgtcattaagggatagtggcgtt
ctgcagctgtggtcctccaatggcacctgcctcgcctccctgcctctagaaacagacgtg
actaacatcacctgctgtccccttgcacattacgccgctgttggaacagcttcaggaaaa
atccttttcattgacttaaactttcagaagcagcttcgcctagtgcatgaggtttatctc
taccacactgctgtggatcatctagcttttgatcaagaagggcgctaccttctctgcagt
ggattggattcccatctttatgtactcgatggaaggccatcggcaaagttttcagttttg
ggatacatcgaggtttctggcagaattttgtcactttccacacaatgcgtcaaccgtggt
gaggatgtgaaagctcttgcactctgtggttcacaagaggataaaaaggatgaggggagc
tggctgctcatgttttttctaccttttaagggcattggaggttctttttctgtagaccgc
actggttgtctgaacattcccaaagtattcaaattcaaagtacaagttccactgacttcc
tgcattcttggggtcggtgaggcctttggttattgccacagaaaaaaatctcttcagcga
tttcagtttcccgaggacacatttggtctctccagcaaaaagagggcccatctgaaccca
aagaatgaagtagcttttcagctgcccggccgtgccacgctccttttgtctcctgactgc
atgttgctcgcctctgtcggacgacaaggcatactacagctcagaccaacctcctctatg
gaactctactgtgagctgcggtgtcattcaagacgcctcggtggaattcggagtgtgtcc
ttctccacagacagtcacatggttgtcactactggcctagacgatggctccgtcctctgc
actaacatcagagctgaagctgaatatatgtctcctatccaaagacgcctgattagggct
cagtccttaaagacttcattcatttctgaaaaccccatcctgattaagtttcctgtgtgg
gaccaggagactccagttaccgacgagcaaacagaggaaactaagttcggccgtgcagca
tcaattgatgtgatagaggaagatgagcataacttcccccctgcttcaacctccacgtgg
ttggaaaaaagacacgaagaaattgtgaaggaagatgaaataaagtatgcagacgttaag
aagagactaagagaagaaatggaagatttacggaagagtgttcagaaactgatgcttgag
aataaaaccctcccaataaaaatgttcaacttagatgtggaggggcagaagagaatggac
gcccgggtggaggcggaagtccagagggtgaaggccgaaattgagcaggacattctagaa
aagcagtaccaaagagacgtcctgaagagagaatgctgggattcttttctgatcaaaccc
cggagcatcaacgcgttccactctaagttagctgtgcagaactatcccattaaagcgcga
acagagaaggagttggaggacatccgcagggttcaaaatatgaggacgattgaaaaagct
gcagccaaactgattggcctgaagaagaacaacagtgagccagaggaaggccatgtggca
gagagtgcagacaacgtaggactcccaactctgttagcccatgccaacgtttacctctac
gaccagttcagcatgcaaactgtcgaacagcggatcaaccagatcatactgttacaggat
ttgatttatgatatcaagatggctttcaactccgacttcgaagccctgttcaagcggaaa
ctgaaagaaatcaaatttgtggtagacgtgaacaaaaacatcagggacatcatgctggag
ctggacatccagcagacgctgtgggagcccagcctgaccgacatggagtggccagagagg
ctgttcatcgtggaggactctgagattgaagtagagaaatacctcaccccagagcagaag
gcagaggaggagagacttaggttggagaaggaggcctgtctggctgcacacaaagacgac
agcagacagagagctctgaatgacatgatgggcggagtccttgaagtgaaaaaagtggac
attttaaaagtggaaatatctcctcctgagttttctttgaccaaacctcccattcagtgg
agtgaagaggagaagaaagtctacaaagaatatgaaaagaacattaaagatctcattgag
gagaaggagaaatataaacggggattggaatttgagatgaaaaaactgcaggaaagcatc
aaagagtcaacggaaaagtttgacgagtcactcacaaagctgtttgagaagaaattaaaa
ttcacagctgctatatatcaggaagagctgaagatcagctatcttgccgaatcagtgcac
atggttgaggcgatgaaccgtcaagagagtgagctcaagctcaaacttgaacaactgctg
gcacaaaaggtaaacatagagaaagacttgagtggatacaaggacacggtggaacagttt
cagttcgattatgagaacatcctagctgaagacaaaaatctcgacaaagaattcaggaaa
gagtttgctgatctaccaaagtttctgactgatcaactttacaaacagttcaagcgtaga
cctagggttcaaaggttgagggccatgtctatagatggctctaacttgttcaagccgatt
cgtctgagcacccccgctcctgatggacttagtcaaatactcgccgccatggaggagttg
gatgctccagacaacatgcctaaaggactgaccttgcccgtctgggagagattttgtgtt
gtgcgcaatacaaaaatagagtatgaacaaaagataaaagtaaaaggtttggagcttgct
gagatgcaagccttcctggagagacggataaatgaagataatgctgcccaagaagaaatt
aagcagcattttgaagaactccgaagcctgaggaacaggaggaacaagtatctcatggac
cctgtgatccaggttgtcctgccacagggacaggtggagacgtccaccatagatctgaca
gctgaaacagctgagactgacttcatccttctccacaaaaaggtggtggatgatgtcaaa
gaaaagatcaggaaagttgcagagcagaagataacctacatggaggcacacggcgcggtc
cgtaaagaaataatccagctggagtgggagcaccgggtgttggacaagaagatagaagac
ttgcatgaaaagaagaaagagatcaagatgcttcgactctcaaaggaagacatggaagta
cttagcatgaaggatccgaaagctcacgagttggagaaaatttctaagctggagaaaagt
attgctttcatgaaacagacccataaaagggccattcaccggcgaatgaaaaaggtaaaa
cagattaacaaaaagatatcgatgatagcagacaaaagtgcttccatacagaaggagctt
cctgagatgcaggcttctgtggcagagctgagacacatttatgaagcctcagctaccgag
gcaaatgaggcagcggaaagagaagagcgctaccaggagattgttcaaaggcgcaacctg
agggacctcgctagggctaagtcggacgaactggaccaactccggaaagaagttgagcgt
ctggaaaggaggaattttccctcactagaccagctgaaatacaactag
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