Xiphophorus couchianus (Monterrey platyfish): 114137911
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Entry
114137911 CDS
T05908
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03430
Mismatch repair
xco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114137911 (mlh1)
03460 Fanconi anemia pathway
114137911 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114137911 (mlh1)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
114137911 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
114137911
NCBI-ProteinID:
XP_027862573
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Position
22:23822967..23831434
Genome browser
AA seq
727 aa
AA seq
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MAGVIRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKATNIQVTVKDGGLKLLQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAK
CAYRASYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPADEYSRIVDVVSRY
AIHNSGKSFSVKKQGETVADVRTLPNASIVDNIRSVFGNPVSRELIEVGCQDQKLAFTLK
GFISNANYSMKRCILVLFINHRLVESSALKKAVETVYAAYLPKNSHPFLYLSLEISPQNV
DVNVHPTKHEVHFLHEDSVMESVQKHIESKLLGSNSSRTYFTQTLLPELSVSGGSEVKTS
GSSESADRVYAHQMVRTDCRAQKLDAFLQPKEKPVPDPETAGPSGSPAATRTSELDSLEL
DDADMLDAALEEPGPAGEEERSGAAEEAQRKRPREEEDEEEEDEGLTAAATLKRRVIKLT
SIKDLRTEITENTHRGLQEMLQKHSFVGCVDPQWSLIQHHTKLYLLNTTTLSRELFYQIL
IFDFGNFGVLRLSTPAPLYDLAMLALDSAESGWTEEDGPKEGLAQYIVDFLKKKAEMLGD
YFSMEIDQEGNLTGLPMLLDKYTPIMEGLPLFILRLATEVNWDNEKECFRDFSKECSAFY
SVRKQFVLEAEPGDEPESDGNSWRWNVEHVLFKSFRTLFSPPKSFSEDGTVLQIANLPDL
YKVFERC
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtgattcggaggctcgatgaaactgttgtcaacaggatcgcagcgggagaa
gttatccagcgtcctgccaacgccgtcaaagaaatgatcgaaaactgtttggacgcaaag
gccaccaacatccaggtgacggtgaaggacggaggcctgaagctccttcagatccaggac
aatggtaccgggatcaggaaagaagacatggagattgtttgtgagcggttcaccaccagc
aaactgcagaccttcgaggacctttcagcgattgcgacctacgggttcagaggagaggct
cttgccagtatcagccatgtggctcatgttaccataacaaccaagacggctgatgcaaag
tgtgcttacagagcgagctacagcgatggcaaactgaagggccctcctaagccctgcgcc
gggaaccaggggacccagatcctggtggaggaccttttctataacgtgtccaccaggagg
aaggccctgaagagcccggcagatgaatactccaggatcgtggacgtggtcagcaggtac
gctattcacaattcaggaaaaagcttttcagtcaaaaagcaaggagagacggtggcggac
gtgaggacacttcctaacgcgtccattgtggacaacatccgcagcgtcttcggaaacccg
gtcagcagggagctgatcgaagtcggctgccaggaccagaaactggccttcaccctgaag
ggcttcatctccaatgccaactactccatgaagcgatgcatcctggttctgttcatcaac
caccggctcgtggagtccagcgctctgaagaaagccgtggaaacggtttacgcagcctac
ctccccaaaaactcacaccccttcctctacctcagcctggaaatctctccgcagaacgtc
gacgtgaacgttcaccccaccaaacacgaagtgcacttcctgcatgaggacagcgtgatg
gagagcgttcagaagcacatcgagagcaaactgctgggctccaactcttcccggacgtac
ttcactcagacgttgctgccggagctgtctgtgtctggcggttctgaagtaaaaacctct
ggatcctctgagtccgccgaccgcgtctacgcccaccagatggtccggaccgattgccgt
gcacagaaactggacgccttcctgcagccgaaagagaagccagtccctgacccagagacg
gccggtcccagcgggtcgccggcggcaaccaggacctctgagctggacagtctggagctg
gatgacgcagacatgctggatgctgcgctggaagaacctggtccagcaggtgaagaggaa
cgcagcggcgctgctgaggaggctcagaggaagcgacccagagaggaggaggatgaagag
gaggaggatgaggggttgacggctgccgccacgctcaagagaagggtgatcaaactgacc
agcatcaaggatctgagaacagagatcacagagaacacacacagaggtctgcaggagatg
ctgcagaaacactcgttcgttggctgcgtggatccgcagtggagtctgatccagcatcac
actaagctctacctgctcaacacaaccacactcagtcgggagcttttctaccaaattctc
atctttgactttgggaacttcggcgtcctcagactgtctacgccggcaccgctgtacgac
ctggccatgctggcgctggactcggcagagagcggctggacggaggaagacgggccgaag
gagggcctggctcagtacatcgtggacttcctgaagaagaaggcagaaatgctgggggat
tatttctccatggagatcgatcaggaagggaacctgacggggctgcctatgctcctggat
aaatacacgcccatcatggaaggcctgcccttgttcatcctgcgcctcgccaccgaggtg
aactgggacaacgagaaggaatgcttccgagacttcagcaaggagtgcagcgccttctac
tccgtcaggaagcagttcgtcctggaggccgagccgggcgacgagccggaatcagacggg
aattcctggcgctggaatgtggaacacgttctgttcaaatctttccgaactctcttcagt
cccccgaaaagcttcagcgaggacggcaccgtgctgcagatcgccaacctgcccgacctc
tacaaggtgtttgagcgctgctga
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