Xiphophorus couchianus (Monterrey platyfish): 114137923
Help
Entry
114137923 CDS
T05908
Name
(RefSeq) vinculin-like isoform X1
KO
K05700
vinculin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04510
Focal adhesion
xco04520
Adherens junction
xco04810
Regulation of actin cytoskeleton
xco04820
Cytoskeleton in muscle cells
xco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114137923
04520 Adherens junction
114137923
09142 Cell motility
04820 Cytoskeleton in muscle cells
114137923
04810 Regulation of actin cytoskeleton
114137923
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114137923
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114137923
04147 Exosome [BR:
xco04147
]
114137923
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
114137923
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114137923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
114137923
NCBI-ProteinID:
XP_027862583
LinkDB
All DBs
Position
22:13382096..13410523
Genome browser
AA seq
1135 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLSVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSCSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVSSMNTIKELLPVLISAIKIFVATKSSRGAGIEEAEKNRRFTFEKMSAE
INEIIRVLQLTTWDEDAWANKKDMEALKRSLALIESKMAQAKSWLKDPQGQPGDPGEVAL
RVILDEAGKVGELCAGRERKDILATTRALGQMTDQIGDLRVRGQGQTPGCMQRAGQCLQG
LDLLFGKVDSAARRLEALINSKQAIARRLDAAQAWLADPNGGPEGEENIRALLAEAKRIA
DLCEDPKERDDILRSINEIAGLTARLMELRKQGKGDSPEARALAKQIGAALLNLQSKTNR
AVANMRPAKPAVTLEGKMEQALRWVNNPGVDDRGVECERIEWNTGQAAIRGMVGEGKRLA
GGLLGPYRQDMVGRCDRTEGLMTALADMASRGEAEAPHARAAAAQLQDTLKDLRQHMQEV
MTQEVSDVFSDTTTPVKLLAVAATAPPDAPNRQEVFEERAGNFETHAGRLGATAEKAAAV
GTANKSTVEGIHAAVKHARELTPQVTSAARILLKNPGNKAAYEHFDTMKNQWIDNVERLT
GLVDEAIDTKSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKRE
VENSEDPRFRDTVKHASDILSHTISPMVMDAKAVAGNIQDKGLQKAYLDSCQRILAAVGK
VREAFQPQEPDFPPPPPDLDQLHVSDEQAPPKPPLPEGELPPPRPPPPEEKDEEFPEQKV
GEVLSEPMMVAARQLHDEARKWSSKPEDEEAVEEREVDDEDEFTDGEDDYEPELLMMPSN
QPVNQPILAAAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCA
KDIAKASDEVTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNI
SEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaagaccattgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcatgaggagggggaggtggatgggaaagccatcccggacctg
tcggtgccggtggccgcggtgcaggcggctgtgagcaaccttgtgcgggtggggaaggaa
actgttcaaaccacagaggaccaggtgatgaagagagacatgcctcctgcttttattaag
gtggagaactcgtgctcgaagctcgttcaggcagctcagatgcttaaggcagatccatac
tctgttcctgcgagggattacctgatcgatggatccagaggaattctgtctggaacgagt
gacctactccttacctttgatgaagcagaggtgcgtaagataatccgtgtgtgtaaaggt
atcctcgagtatttgacagtagctgaagtggtggagaccatggaagatctcatcacttac
acaaaaaatctcggaccaggcatgacgaagatgtcaaagatgattgaggagcggcagcag
gagctgacccaccaagagcaccgacagatgctcgtcagctccatgaacaccatcaaggag
ctgctgcctgttctcatctcagctataaagatttttgtggcaaccaaaagcagccgagga
gccggcattgaggaggctgagaagaaccgaaggtttacgtttgagaagatgagcgccgaa
atcaacgagatcatcagagtcttacagctcaccacgtgggatgaagacgcctgggcaaac
aagaaggacatggaggccctgaaaagatctctggctttgattgaatcaaagatggcacag
gctaaaagctggctcaaagacccacagggacagccaggagaccctggcgaggtggcgctg
cgtgtcattctggacgaagctggtaaggtgggagagctgtgcgctgggagggagaggaag
gacatactggcaaccaccagggctctggggcagatgactgaccagattggagatctgcgt
gtcagaggccagggccagactccagggtgcatgcagcgcgcaggccagtgcttacagggc
ttagatctgctctttggcaaagtggacagtgctgctcggagactagaggctctaatcaac
tcaaagcaggccattgccaggaggctggatgctgcccaggcatggttggccgatcctaat
ggtggtcctgagggagaggagaacatccgagcgcttctagcggaggccaaacgcatcgca
gacctctgtgaagaccccaaggagagggacgacatcctgcgctccataaacgagatagca
ggactcaccgcccggctcatggagctgcgcaaacagggtaaaggcgacagcccagaggcc
cgagctctggcaaagcagattggagcggctctgctaaacctgcagtccaagaccaaccgg
gcggtggccaacatgagaccagcaaagcctgctgtcacgctggagggcaaaatggagcag
gctctgcgctgggtgaataatcccggggtggatgacagaggcgtagagtgtgagaggata
gagtggaacacaggccaggcagcaatcagaggaatggttggagaagggaagaggctggcg
ggaggcctgttgggtccgtaccggcaggacatggtcgggcgctgcgaccgaacagagggg
ctgatgacagctttggcagacatggcaagcaggggagaggctgaggctcctcatgcccga
gccgcagcggcacaacttcaggacaccctcaaggacctgaggcagcatatgcaggaggtg
atgacccaggaggtatccgatgttttcagcgacaccaccacccccgtcaagctgctggcg
gtggctgcaactgctcctcctgatgcgcccaacaggcaggaggtctttgaagaacgtgca
gggaactttgaaacccatgctggacgactgggagcaaccgcagagaaggccgccgctgtg
ggaacggcgaataagagcacagtggagggaattcatgctgccgtgaaacatgccagggag
ctgacgccacaggtgacttctgctgctcggatcttgctaaaaaatccaggaaacaaagca
gcctatgagcactttgacaccatgaagaaccagtggattgacaatgtggagagactgacc
ggtctggtcgacgaagccatagacaccaaatccttgttggatgcttctgaggaagccatt
aaaaaagacattgacaagtgccgagttgccatggcaaacgttcagccccaaatgctcgtt
gccggggcaacaagcatagcgagacgagctaaccgggtcttgttggtggccaagagggaa
gtggagaactctgaagatccccggtttagagatactgtaaaacatgcgtctgacatcctc
tcacacaccatctcacccatggtgatggacgccaaggctgtggctgggaacatacaagac
aaaggcctacagaaagcatatttggactcttgtcaaaggatcttggctgcagtgggaaaa
gtcagagaagccttccagcctcaggaaccagacttcccgcctccgcctcctgacctggac
cagctccatgttagtgatgaacaggctccacctaaacccccgctgccggagggtgagttg
cctccaccccgtcctcctcccccggaggagaaggacgaggagttcccggagcagaaggtc
ggcgaggtgctcagcgaacccatgatggtggcggccaggcaactgcatgacgaagcgcgc
aagtggtcaagcaaacctgaggatgaggaggcagtagaggagagggaggtagatgatgaa
gatgagtttactgatggtgaggatgactatgagccagagctgctgatgatgccgtccaac
cagcctgtcaatcagcccattctggcagctgcccagtctctccaccaggaggctcgcaag
tggtccagcaagggtaatgacatcatagcagcagccaagcggatggctctgctgatggct
gaaatgtctcggctggtgcgtggcgggagcggaaacaagcgagcgctgattcagtgcgca
aaagacattgccaaggcctcggatgaggtgacgagactggctaaagaagtggccaagcag
tgcacagacagacgcatcaggacgaatctgctgcaggtttgtgaacgaattcccaccatc
agcactcagctgaagatcctttccactgtcaaagctaccatgctgggacggacaaacatt
agcgaagaggagtcagagcaggctacggagatgttggttcacaacgcccagaatttgatg
cagtctgtaaaggagacagtgcgagaagcagaagctgcctccattaaaatccgcacagat
gcaggattcaccctccgctgggtgcgcaagacgccctggtaccaatga
DBGET
integrated database retrieval system
