Xiphophorus couchianus (Monterrey platyfish): 114137951
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Entry
114137951 CDS
T05908
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114137951 (btaf1)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114137951 (btaf1)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
114137951
NCBI-ProteinID:
XP_027862628
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All DBs
Position
22:22468005..22502240
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AA seq
1859 aa
AA seq
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MIMAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPSWDT
RIAAGQAVEAIVKNIPEWNPAPKPKEESRENLSPEDSSCDRLNFYHFDISRLLRHGASLL
GSAGAEFELQEDKTGEMDPKERLARQRKLLQKKLGLDMGAAIGMDTDELFNDEDLDYSCH
PSGFKAQGFRATAGCSSRNHVTIQAAELIDSEFRPGMSSRQKNKAKRLAKLVAKQKSRDV
DANEKSNDSIEGEPEEKRRKTTNVVIDQPATEHKVLIDNVPDNSGLLEESHEWPLESFCE
ELCNDLFNPSWEVRHGAGTGLREILKSHGSGGGKLVGSTAEQMSRQHQEWIEDLVIRLLC
VFALDRFGDFVSDEVVAPVRETCAQTLGVSLLHMSENSVAMTVDVLLKLLKEDQWEVRHG
GLLGIKYALAVRQDLISVLLPRVLPAITEGLQDLDDDVRAVAAAALIPVVEGLVQLLPNK
VPFIVNTLWDALLDLDDLTASTNSIMTLLSLLLTFPHVRQCSMEQSLTVLVPRVWPFLRH
TISSVRKAALETLYTLLSKADESCAVWINPILQDMLRHIFQSCILESNDEILELIQKVWM
ELLSQVPQQFVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARSKDKAGAKARLGNNQ
VKETVQQYIAGAETLADDSLTRDYVVVRARLMAARLLGGLCRCICDPQLNAASQEIRPAE
SLGQLLLFHLNSKSALQRIAVALVLCEWAALQKDCQMVSSMVQPRLLSVLTEQLYYDEIA
IPFTRMQNECKQLISLLAEVHIDLQDRLNSSVFTIDQANELVTTIFTETTAGMNVKSKQW
LALESKRQQAQSTVMETNTEWQQLHLRVHMFTACAAINLEVLPDKLNPLVRPLMETVKKE
ENTLIQSYAASFIAKLLRQCAVRSPCPNPKIIKNLCASACMDPSATPSSACPVPTAQEQA
KGGGLERDGMHHMVNKTQGIITLYRHQRAAFAITSKRGPTPKAPKAPVTELPPGSTISSD
NDETKKQFLVQRRGAEFALTTVAKHFGADLNRSLPYLWENTVGPLKAVAKENLCIDRQAQ
LERGDAAAQELVNSLQVLEVMAGAMAGELRPLLLEHLPHLFTCLQHPYTAVRHMAARCVG
VLSKIATLETMNSFLEYVLHWLAAIDDCTKQEGAIEALACVMEQLDVDIVPYIVLLVVPV
LGRMSDPSDSIRFMATQCFATLIRLVPLEAGIPDPPAMSADLIQQKARERQFLEQLLDGR
KLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDQYL
RAQEYAKTKAADCSPLPSLVVCPPTLTGHWVDEVAKFCSKEFLNPLHYTGPPTERMRLQH
QVKKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRVIL
SGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEA
LHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKASVEDSISAA
SGEEEEKPKLKATGHVFQALQYLRKLCNHPNLVLTPQHPEYNRITDQLACQNSNLRDIQH
APKLSALKQLLLDCGLGGGGGAEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPTV
TYLRLDGSVPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMR
DLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVINQENTSLQSMGTD
QLLNLFTLDKDDKSDKGEQSSSTSGKASIKSVLDGLGELWDQQQYDSEYNLDSFMNSLH
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggctgtatcaagacttgaccgtttgtttatcttgctcgacactggaaccaca
ccagtaaccaggaaagcagcagcccagcagcttggagaagtggtgaaacttcacccacat
gaactcaacaacctcctgtcaaaggtgcttacctatctacggagtcccagctgggacact
cgaattgcagccggccaagccgtggaggccattgtgaaaaatattcctgagtggaacccg
gctccgaagccaaaggaagagtcccgtgaaaacctgtccccggaggactcgtcctgtgac
cggttgaatttttaccattttgacatctcccgcctgctcaggcacggagcgtcgctgctc
ggatccgcaggagccgagtttgagttgcaggaagacaaaactggtgagatggatcctaag
gaacgtctggctcgtcagaggaagctgctccagaagaagctgggtctggatatgggagct
gctataggaatggacacagacgagctgttcaacgacgaggacctggactattcctgccat
cccagcggctttaaagcccaaggattcagagctacagctggctgcagctcccgcaaccac
gtgactattcaagctgctgaattgatcgactcggagttccggcccggcatgagcagccgt
cagaagaacaaagccaaaagactggctaaactcgtggcaaaacaaaaatccagggacgtg
gatgctaacgagaagagcaatgacagcatagaaggtgaacctgaggagaaacggaggaaa
acaaccaacgtcgtaatcgaccagccggcaacagaacataaggtcttaattgacaacgtt
ccagacaactccggtcttttagaggagtcacacgagtggccattggagagcttctgtgaa
gagctttgtaacgacctcttcaacccatcatgggaggttcgtcatggtgcgggcacaggc
ctcagagaaatcctgaagtctcatggttctggtggtgggaaactggttggaagcactgca
gaacagatgtcgcgacagcatcaggagtggatcgaggatctggtcatccgtctcctctgt
gtgtttgctttggaccgctttggggacttcgtatctgatgaggtggtggctcctgtcaga
gagacgtgtgcccagacgctcggtgtctctcttcttcacatgagtgaaaacagcgttgcc
atgacggtggacgtcctgctgaagctgctgaaggaggaccaatgggaggtccggcatgga
ggcctgttggggatcaaatatgccttggctgtccgacaggacctgatctccgtcctgctt
ccccgggtgctgcctgcaataacagaaggtctgcaggacctggatgatgatgtcagggcg
gtggctgctgctgctctcatcccagtggtggaagggttggtccagcttctgcccaacaag
gttccttttattgtaaacacactatgggacgcactcctggacctggacgacctgaccgct
tccaccaacagcattatgacgctgctgtctttgctgctgacctttcctcatgttcggcaa
tgcagcatggagcagtcactgactgtcctggttcctcgagtttggccgtttttaagacac
accatatcatccgtaagaaaggctgcgctggaaacgctctacacactgctgtctaaagct
gatgagagttgtgcagtttggataaatcccattttacaagatatgttgcggcacattttc
cagtcctgtatactagagagcaacgacgaaatactggagctcattcagaaggtgtggatg
gagctgctgtctcaggtcccccagcagttcgtggtggcagccagctgtccttggatgggc
gcctggctctgcctgatgatgcaggcctctcacattcccatagacctgaacatgctgctg
gaggtgaaggcccgctccaaggataaggctggagcaaaggctcggctaggaaacaatcaa
gtgaaggaaacggtccagcagtacatagccggggcggagactctagcagacgattcgttg
acgagggattacgttgtggttcgtgccagactcatggccgccagattgctgggaggtctg
tgtaggtgcatctgtgaccctcagcttaatgctgcatcccaggagatccggccagccgag
tctttgggccagctgttgctcttccatctcaactccaaatcagccttgcaacggatagcc
gtggctctggttctctgtgagtgggctgcactacaaaaggattgccagatggtgtcgtcc
atggtgcagccgcgacttctgtctgtcctgaccgagcagctgtactacgacgagatcgcg
attcctttcacacgcatgcagaatgaatgcaagcagctcatttcgttgcttgctgaggtt
cacatagaccttcaagatcgcctcaacagcagcgttttcaccatagaccaagccaacgaa
ctggttaccaccatcttcacagagacgacggcaggtatgaacgtgaagtccaagcagtgg
ctggcgctggaaagcaaacgacagcaagcccagtctaccgtgatggagaccaacacggaa
tggcagcagctgcatctgcgcgtccacatgttcaccgcctgcgccgccatcaacctggaa
gtgcttcccgacaagctcaaccctttggtgcggccactcatggagacggtcaagaaggag
gagaacaccctgatccagagttacgccgcttccttcatagccaagctgctgcggcagtgc
gccgtccgctcgccgtgccccaacccaaagattatcaaaaacctctgcgcttcggcgtgc
atggacccctcggccacgccctcgtccgcttgtcccgttcccacagcgcaagaacaggct
aaaggaggtgggctagaaagagatggcatgcatcacatggtcaacaaaacccaggggatc
atcactctgtaccgccaccaacgggccgcgtttgcaattacaagtaaaagaggtccgaca
ccgaaggcgccgaaagccccggtgacagagcttcctcctggcagcacaataagctccgat
aacgatgagaccaagaagcagtttcttgttcaaagacgaggagcggagtttgccctaacg
accgttgctaagcactttggtgcggacctcaacaggagtctgccgtacctctgggaaaac
acggtgggaccgttgaaggcggtcgccaaggagaacctttgcatcgacaggcaggcccag
ctggagagaggcgatgcggcagctcaggaattggtcaactctctgcaagttttggaagtc
atggctggagccatggcgggtgaacttcgacctttgttactggaacacctacctcatttg
tttacatgcctgcagcacccgtacacagcggtgcggcacatggccgcgcgctgtgtgggc
gtgctcagtaagatagccacactggagaccatgaacagtttcctggagtatgtgctccac
tggttagctgctatcgacgactgcacgaaacaggagggcgccatcgaagcgctggcttgt
gtgatggagcagctggacgtcgacatcgttccctacatcgtgctgctggttgttcccgtt
ctgggccgcatgagcgaccccagcgacagtattcgttttatggccactcagtgcttcgct
acgttaatccgcctggtgcctctggaggcaggaataccagacccgccggccatgtcggcc
gacttgatccaacagaaagcgagagagcgtcagtttctggagcagctgctggacggcagg
aagttggagaactataagatccctgtgccgattaaagctgagctcaggaagtatcagcag
gacggcgtgaattggctggcgttcctgaacaaatacaagctgcacggtatcctctgtgac
gacatgggcctggggaagacgctgcagtccatctgcattctggcaggagatcagtacctc
agggctcaggaatatgcgaagaccaaggcagcagactgcagccccctgccctcgctggtg
gtgtgtccgcccacgctgacgggccactgggtggacgaagtggccaagttctgctccaaa
gagttcctcaacccgctgcactacaccggacctcccacggagcgaatgcggttgcagcat
caagtgaaaaaacacaaccttgtagtcgcttcttatgatgtcgtgcggaacgacatcgac
tttttcagaaatataaaatttaattactgcatcctggatgagggtcatgtgatcaagaat
gggaaaaccaaactgtccaaagccatcaagcagctagcggctaacttcagggtcatcctg
tcgggaacgcccatccagaacaacgtcctggagctctggtcgctcttcgacttcctgatg
cccggcttcctgggaacagaacgccagttcgccgcgcgctacgggaaacccattctggcc
agccgcgatgccaagagctcatccagagaacaggaagctggcgtcctcgccatggaggct
cttcatcggcaggttctgccgttccttctgaggaggatgaaggaggatgtgctccaagac
cttcctcctaaaataatccaggactattactgcactctcagccctctgcaggttcagctc
tacgaagactttgcaaagtctcgagccaaagccagcgtggaggacagcatctctgcagcc
tccggtgaggaagaggagaagcccaagctgaaggctacaggtcacgtcttccaggcgctg
cagtacctgcggaaactctgcaaccacccaaacctggttctgacgccgcagcatccggag
tacaatcgcatcacggatcagctggcgtgtcagaactccaacctgcgcgacattcagcac
gcgccgaagctctctgctctcaaacagctgctactggattgcggtcttggcggcggcgga
ggagcggaaggcgggacggaggcggtggtggcgcagcatcgcgttctcatcttctgtcag
ctgaagagcatgctggacatcgtggagcacgacctgctgaagcccaaactgcccaccgtc
acctacctgcggctggacggcagcgtgccggccggccagcgccactccatcgtctccagg
tttaacaacgatccctccattgatgtgctgctgctcaccacccatgtcggtggtctgggt
ttgaacctcaccggcgcagacactgtggtgtttgtggagcacgactggaaccccatgagg
gacctgcaggccatggaccgtgcccatagaataggacagaaacgggtggtgaacgtttac
cggctgattacgcgaggcacgctggaggagaagatcatgggactgcagaaattcaagatg
agcatcgccaacaccgtcatcaaccaggagaacaccagcctgcagagtatgggcacagac
cagctgctcaacctcttcactctggacaaggatgacaagagtgacaaaggagagcagtcg
tcatcgacctcagggaaggcgtccataaagtctgtgttggacggcctcggggagctgtgg
gaccagcagcagtacgactcggagtacaacctggacagcttcatgaactcgttgcactag
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