Xiphophorus couchianus (Monterrey platyfish): 114137983
Help
Entry
114137983 CDS
T05908
Symbol
nrxn1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114137983 (nrxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114137983 (nrxn1)
Membrane trafficking [BR:
xco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
114137983 (nrxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
114137983
NCBI-ProteinID:
XP_027862660
LinkDB
All DBs
Position
22:15150058..15409456
Genome browser
AA seq
1503 aa
AA seq
DB search
MVVQKLHSAHFIWVGILICCFIEIGTCLEFTGTEGQWARFPVWNACCESEMSFNMKTKSS
HGVLVYFDDEGFCDFLELLLINGKLSLRYSIFCAEPATVVSDTAVNDSQWHNVTIRRSFK
NTTLSVDGEIKWVEAKSKRRDMTVFSHLFIGGIPPELRSVVLHLTSAAVKDQPPFAGWIT
DIKVNNTESEMINSEGVLLDVCGTANMCLNGGVCSLINSEPTCDCSHTGFQGKDCSEEDN
NTEGLAHLMMGDQGKSKGQRGETWLVRSLLSIQGKEEYVATFKGSEFFCYDLSLNPIQSS
SDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFND
NEWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTAD
LPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQDDPKMKIHGTVAFKCENVATLDPITF
ETPESYIILNKWNAKKTGSISFDFRTTEPNGLLLFSHGKSKQQPKDSKTPQTLKVDFFAI
EMLDGHLYLLLDMGSGTTKTKAVNKKVNDGEWYHVDFQRDGRSGTISINTLRTAYTAPGE
SEILDLDDNLYLGGLPENKMGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRLAEIQ
KAAGVKPSCSKEPPKQCLSNPCQNNGVCREGWNRYVCDCSGTGYLGRSCEREATILSYDG
SKFMKVQLPVVMRTEAEDVSLRFRSQRAYGLLIATTSRESADALRLELESGRVRLTVNLD
CIRINCTSSKGPETIFAGQNLNDNEWHTVRVFRRGKSLKLTVDELPPVEGQMAGDHTQLE
FHNIETGIVTEKRFMSMVPSNFIGHLQSLSFNGMAYIDLCKNGDIDYCELNAMIGFKNII
ADPVTFKSRSSYVTLTTLQAYYSMHLFFQFKTTSPDGLILYNSGDGNDFIVVELVKGYLH
YVSDLGNGAHLIKGNSNKPLSDNQWHNVIISRDTNNLHTVKIDTKVTTQTTSGAKNLDLK
GNLYIGGVAKEMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMSDALDCVGQIERGCEGP
STTCQEDSCANQGVCLQQWEGFSCDCSMTTFGGPLCNDAGTTYIFGRDGGLITYTWPPND
RPSTRADRLAIGFSTHLKDAVLVRVDSSSGLGDFLKLHIEKGNIAVVFNVGTDDINIEET
SKFVNDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGNIDNERLALARQRIPYRLGRVVD
EWLLDKGRQLTIFNSQTTIQIGGWERDRSRSFQGQLSGLYYNGLKVFNMAAEGDPNIKIQ
GSVRLVGESPSSITPQSSTTANRSETSTSIMEITTTTASTRRIKQTTPREPQQTTDDLMV
ASAECPSDDEDIDPCEPSSGGLASPTGSGPKGYPGTSEVFRESSSTTGMVVGIVAAAALC
ILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGTVVKEKPINNPKTSSKNKKNKDKE
YYV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggttgtacaaaagctgcacagtgcccatttcatatgggttggaatcctcatatgctgc
ttcattgaaataggcacctgtctagaatttacaggtactgagggacagtgggctaggttc
ccagtgtggaatgcatgttgtgaaagtgaaatgagcttcaacatgaaaacaaagagctcc
catggggttcttgtttactttgacgacgagggattttgtgactttttagaacttctccta
ataaacggcaaactcagccttcgctactcaatcttctgcgcagagcctgcaactgtggtg
tctgacactgcggtcaacgacagccaatggcacaacgtcacgattaggagaagctttaag
aacacaaccctttctgtggatggcgagataaagtgggtagaagcgaagtcgaaaagacga
gacatgactgtcttcagccatttgttcattggtggaataccaccggagctaaggtctgtg
gtgttgcacttgacgtctgcagcggttaaggatcagccaccttttgcaggatggataaca
gatataaaggtcaacaacacggagtctgaaatgatcaacagcgagggggtcttactggat
gtctgtgggacagccaacatgtgcttaaatggaggagtttgcagtttaattaacagtgaa
ccgacatgtgactgctctcacactggcttccaaggaaaggactgcagtgaagaagacaac
aataccgaaggtctggcacacctgatgatgggcgaccaaggtaaaagtaaagggcagaga
ggggagacttggcttgtaaggtccttactgagcatacaaggaaaagaagagtatgttgca
accttcaaaggatctgagttcttctgctacgacttgtccttgaacccgattcaaagcagc
agtgatgaaatcacgttatcattcaaaaccctacagaggaatggactaatgttgcacacg
ggcaaatctgccgattacgtcaacctggcgctgaaaaatggggctgtgtcactcgtcatt
aatttggggtctggagcctttgaagctcttgtggagccagtcaatgggaaatttaatgac
aatgagtggcatgatgtcaaagttacaaggaatctacgtcagcactcaggcattggacac
gctatggtaaccatatccgtagatgggattctgaccacaacaggatacacccaggaagac
tataccatgctaggctcagacgactttttctatgttggaggaagcccgagtacagcagac
cttcctggatctccagttagcaacaacttcatgggttgcctcaaggaggttgtttataaa
aacaacgatgtgaggctcgagttgtctaggctggctaagcaggatgaccccaagatgaaa
atccatggcactgtggcctttaagtgtgagaatgtagccactctggaccccatcacattt
gagacacccgagtcgtatattattctcaacaaatggaacgccaaaaagactgggtccatc
tcctttgacttccgcaccaccgaacccaacggccttctacttttcagtcatggcaagtcc
aaacaacaaccaaaggactccaagacaccccaaactcttaaagtggacttcttcgccatt
gagatgctggacggccatctgtacttgctgttagatatgggctctggaaccacaaagacc
aaagcagtcaataaaaaagtcaatgatggtgaatggtaccatgtggacttccagcgagat
ggaagatcaggtactatctctatcaatacccttcgtactgcttacacagcccctggagaa
agtgagatcttggacttggatgacaatctgtaccttgggggtctgccagagaacaagatg
ggcctcgtgttccccactgaggtgtggacagcattgctcaactatggctatgtgggctgc
attcgagatttatttatcgatggacagagtaaggatgtgcgacgtcttgcagagatccag
aaggctgctggggtcaaaccctcatgctctaaagagcctcctaagcagtgcttgagcaac
ccctgccaaaacaatggggtctgcagagagggctggaaccgctatgtctgcgactgctct
ggaactggatacttgggacgctcctgtgaaagagaggcgaccattctcagttacgacggc
agtaagtttatgaaagtccagctcccagtggtgatgcgcaccgaagccgaagacgtgtct
cttcgattccgctcccaacgggcgtatggcctgctaatagccaccacatcccgggaatct
gctgacgccctgcgtctggagctggagagtggtcgtgtccgtcttaccgtcaatttagat
tgtatcaggattaactgtacctccagcaaaggcccagagacaatttttgcgggtcagaac
ctgaacgataatgagtggcataccgtacgtgtgttcaggagaggcaagagtttgaaactg
acggtagatgaactaccgcctgtggaaggtcaaatggcaggtgaccacacccagctggaa
tttcataacattgagacgggcattgtgacagagaagcgcttcatgtccatggtgccctcc
aacttcattggccacctccaaagcctctccttcaatggcatggcttacattgacctctgc
aaaaatggtgacattgattattgcgaactcaatgccatgattggcttcaagaacatcatt
gctgatccagttaccttcaagtcacggtccagctatgtgaccctcaccactctgcaggcc
tactactccatgcaccttttctttcagtttaaaaccacatctcctgatggtctcattctc
tacaacagcggcgatggaaatgacttcattgtggtggaactggtcaaaggttatcttcac
tatgtgtctgacctggggaatggagcccacctcatcaaaggcaactcaaataaaccccta
agtgacaaccagtggcataatgtcatcatctcccgggacaccaacaatctgcacacagtc
aagattgacaccaaggttaccacacagacaacctcaggagccaagaaccttgacctgaag
ggaaacctttacattggtggggtggctaaggagatgtataaggacctgcccaaactggtg
catgccaaggagggtttccagggttgcctggcatcagtggacctgaatggacgcctccca
gacttgatgtcagatgctctggactgtgtgggacaaatagagagaggatgtgaaggccca
agcactacatgccaagaggactcgtgtgccaaccaaggtgtgtgccttcagcagtgggag
ggcttcagctgtgactgcagcatgacaacatttggaggaccactttgtaatgacgcggga
acaacatacatatttggcagagatggtggactgatcacctacacatggccaccaaatgac
cgacccagcacaagggcggaccgactcgccattgggttcagcacacacctgaaggatgca
gtcttggtgagggtggatagctcctctggactcggagacttcttgaagctccacattgaa
aaaggaaacattgctgtagtatttaatgtgggaacagatgacataaacatcgaggagaca
tcaaagtttgtaaatgatggaaagtaccatatagtgaagtttacaaggagtgggggtaat
gccactctgcaggtggatgacctgccagtcattgagcgctaccctacaggcaacattgat
aacgaacgcctggcgcttgctagacagcgaatcccataccgactcggtcgagtagttgac
gaatggctactcgacaaagggcgacagcttacaatcttcaacagccaaactactatacaa
attgggggctgggagcgagatcggagtcgatcctttcagggccagctctcaggtctctac
tacaatggcctaaaggtgttcaacatggccgccgagggcgatcccaatataaagatccag
ggcagcgttcggctggttggggagtctccctcctctatcacacctcagtcgagcaccaca
gccaaccgctcggaaacatccacatccatcatggaaatcaccaccaccaccgcatctacc
aggagaattaaacagaccacaccgcgggaacctcagcagacaactgatgacttgatggtg
gcttcagcggagtgtccaagtgatgatgaagacattgatccctgtgagccgagctcaggt
gggttagccagtcccacaggatctggaccgaagggttatccgggcacgtcagaggtcttc
cgggagtccagcagcacaacggggatggtggttggcattgtagcagcagctgccctgtgt
atactcatcctcctttatgctatgtacaagtaccgtaacagagatgagggatcgtatcac
gtggatgagagtcgcaactacatcagcaactcagcacaatccaatggcacagtagtcaaa
gagaaacccatcaacaacccgaaaacctccagcaagaacaagaagaacaaggacaaagag
tactacgtgtga
DBGET
integrated database retrieval system
