Xiphophorus couchianus (Monterrey platyfish): 114138018
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Entry
114138018 CDS
T05908
Symbol
rtn4
Name
(RefSeq) reticulon-4 isoform X1
KO
K20720
reticulon-4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114138018 (rtn4)
03036 Chromosome and associated proteins [BR:
xco03036
]
114138018 (rtn4)
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
114138018 (rtn4)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114138018 (rtn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
114138018
NCBI-ProteinID:
XP_027862805
LinkDB
All DBs
Position
22:25420878..25436426
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AA seq
1054 aa
AA seq
DB search
MADSEEVSSSTPLFSEGHHYQPEPEPEPQLDQRPGEERFNPDDIVDLVGGAQDALERHRA
EEESGLQEPTVTSTRPEPAREPELEPVREPETEPEPIREPEPEPVWEPEPQTVREPEPEP
VQVYEPEPVPIREPQPETVFLQENVPEPEPFKEPEPMLLQKSVPKPEPIKEPEPEPQAPN
EPEVVAPGAEAGIPGPAPPAEPPAPQSDALLAAAAREAAPSPAEAAAQPAVTQEPLAPAS
YASSPAKAQPLLLMQLPTELGQKGDSPAPISPISPLHSPDSLEELSLTESPNQPPPPGSA
APLGSFSITPPTILSKNMPWDGEEGDSGPGRGKTKEDLLDSLAAPYLSLGKDSGPHNPCE
DSGISFSPEEKMISSDRSSTGPSPVNPVMMVHESHLTSSNPTEHWDSPFLSSEDNSKVSM
DSFTKDTTPISSSKYEPDVCGNQSDEDEDLNYEVKKNNNPFDVYSPLADSGYSHFGEPKS
DTKMSESPTPDLVQYRQTGESQENQPSILDGGKLFETTKTASEALLESMNQFSSGLKEDD
EEEDEEDSALPPSLPDILKSSPLNPDKVDSGSSEGSPEEQSPILERRMMESPNPPINLSA
NNPFAFDTKVSLLKEMTEEMEARSADGTTVEDSKNFGAFDLVKEAEETTPPKVKAEEPVQ
IEQKDWFSSNDSPKRPERFEPLDFQSKKTTTEDSDSESPTADSLSPVLEAMAKNPASFQV
EIEKKDLKMELEEPEVAEEVSEHEVSSEEFEFIERPPRGVIDEFLEALDPSKFSSPKPPE
IPLDDDLGFSLKDTPAIAVPEPEALSQSSYHLLTQASTQKTKAELETPLSQAPPARLPAG
NPEQPAPQRSAAGSKLFKMPNLNIRAVVELVYWRDVKTTGVVFGAALLLLLSLSVCSIVS
VCSYIGLALLSVTICFRIYKGILQAIQKSDEGHPFKLYLDQEVALSADLAHKYSDVILEK
LNWTIEELRRLFLVEDLVDSIKFAILMWILTYIGALFNGLTLLILGLVGAFSCPIIYEKH
QAQLDHYLALVTNQVKDIVEKIQEKVPGLKRKAE
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagcgaggaggtctcttccagcacccccctgttcagcgagggccaccactac
cagcccgaaccggaaccagaaccccagctggaccaaaggcccggcgaggaacggttcaat
cccgatgacatcgtggacctggtcggcggggctcaggacgccctggagcggcaccgggct
gaggaggagagcgggctgcaggagcctactgtgacctccacccgaccagaacctgcccgg
gagccagaactagaaccagtccgggagccagaaacagaacctgaaccaatccgggaacca
gaaccagaacctgtctgggaaccagaacctcaaactgtccgggaaccagaaccagaacct
gtacaagtttatgagccagaaccggtaccaatcagagaaccacaacctgagacagtgttt
ctacaggaaaatgtgccagaaccagaaccttttaaggaaccagaaccaatgctgctgcag
aaaagtgttccaaaaccggaaccaataaaggaaccagaaccagaaccccaggccccgaat
gagccggaggtcgtggcccccggagccgaggcggggatccccggcccggcccccccggct
gagcctcctgccccgcagagcgacgccctcctcgcggctgcagcccgggaagcagcgcca
tccccggcagaggcagcagcgcagcccgcggtgacacaggaaccactggctccggcttcg
tatgcatcttctcctgccaaagctcagcctcttcttctgatgcagctccctacagaactt
gggcagaagggtgactcccctgcacccatctctcctatctcccctctccactcacccgac
tctctggaagagctttctctgaccgagagtcccaaccagccccctcccccaggatctgct
gcacccctgggctccttctccatcacaccccccactattctctccaagaatatgccttgg
gatggcgaagaaggcgactctggacccggacgtggtaaaaccaaggaagaccttctagat
tccctagctgctccctacctgagtttaggcaaagactcagggcctcataatccgtgtgaa
gacagcggcatttcgttttcccccgaagagaagatgattagctcagacaggtcctccacc
ggcccctcccctgtcaaccctgtgatgatggttcatgagtctcaccttacctcctctaac
ccaacagagcactgggattcaccgttcctctcatctgaagacaactccaaagtctccatg
gattccttcaccaaggacacaacacccattagctcctccaaatatgaaccagacgtttgt
ggcaaccagtctgatgaagatgaagacttgaattatgaggtaaagaagaataataacccg
tttgacgtatattccccgctagccgacagtggctactcccattttggagaaccgaagtct
gacaccaagatgtcagagagtcccacaccagatctggtccagtacaggcagactggagag
tcccaggagaaccaaccatccatcctagacgggggaaaacttttcgagaccactaagacg
gccagtgaagccctcttggagtcaatgaaccagttctcatctggtctgaaagaagatgat
gaggaagaagatgaagaggattctgctttgccaccgtcgcttccagacatcctgaagtct
tcccctctcaaccctgacaaagtggactctggctcttctgagggaagtccggaggagcag
agccccatcctggaacgccggatgatggagtcgcccaaccctccgatcaacctatccgcc
aacaacccgtttgcttttgataccaaagtgtctctcctgaaggagatgaccgaggagatg
gaggcgagatctgcagatggtacaaccgttgaagacagcaaaaactttggagcctttgat
ctggtcaaggaggctgaggagaccaccccgccgaaggtcaaagcagaggaacctgtccag
attgagcagaaagactggttctccagcaacgattctcccaaaaggcctgaaaggtttgaa
ccgcttgactttcagagcaagaagaccaccaccgaagattcagactctgagtctccgacc
gcagattccctgtcgcctgttctggaggccatggccaagaaccctgccagcttccaggta
gaaattgagaagaaagacctgaagatggagctggaggagccggaggttgctgaggaggtg
tctgagcacgaggtctcctcagaggagtttgagttcattgagcgaccgccccgaggtgtg
atcgatgagttcctcgaggctctggacccctccaagttctcatccccgaagcctccagag
atccccctggatgatgacctcggcttcagcctgaaggacacgcctgccatcgcggttcct
gagccagaagcccttagccagagctcctaccacctcctcacccaggcctcaacacagaag
accaaggccgagctggagacccccctgagccaggcgccacccgcccgcctgccggccggg
aaccccgagcagccggccccccagaggagcgccgcgggcagcaaactgtttaagatgcca
aacctgaacataagagcagtggtggagctggtgtactggcgcgacgtgaagacgacgggc
gttgtgttcggcgcggcgctgctgctgctgctgtcgctcagcgtctgcagcatcgtcagc
gtctgctcctacatcggcctggcgctgctgtccgtcaccatctgcttccggatatacaag
ggcatcctgcaggccatccagaagtccgacgagggacaccccttcaagctgtacctggac
caggaggtggcgctgtccgcggacctggcccacaaatacagcgatgtaattctggagaag
ctgaactggacgatcgaggagctgaggcgtctgttcctggtggaggacctggtggactcc
atcaagtttgcgattctgatgtggatcctgacctacattggcgccttgttcaacggactc
actctgctgatcctcggtctggtcggagcgttcagctgcccaatcatctatgagaaacac
caggctcagctcgatcactacctggcgctggtcaccaaccaggtcaaggatattgtggaa
aagattcaggaaaaggttcccggactgaagcgtaaggcggagtga
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integrated database retrieval system
