Xiphophorus couchianus (Monterrey platyfish): 114138068
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Entry
114138068 CDS
T05908
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03010
Ribosome
xco04120
Ubiquitin mediated proteolysis
xco04137
Mitophagy - animal
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
114138068
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114138068
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114138068
04137 Mitophagy - animal
114138068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
xco03011
]
114138068
04121 Ubiquitin system [BR:
xco04121
]
114138068
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114138068
Ribosome [BR:
xco03011
]
Ribosomal proteins
Eukaryotes
Small subunit
114138068
Archaea
114138068
Ubiquitin system [BR:
xco04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
114138068
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114138068
Exosomal proteins of colorectal cancer cells
114138068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
114138068
NCBI-ProteinID:
XP_027862896
UniProt:
A0A3B5LAC1
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All DBs
Position
22:complement(25409339..25412125)
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaaccctcacggggaaaactataaccctcgaggttgaaccttca
gatactattgaaaatgtcaaggctaagatccaggacaaggaaggaatccctcctgaccag
cagaggctgatctttgctgggaagcagctggaggacggacggacgctgtcggactacaac
atccagaaggagtccactctgcacctggtgctgcggctgagaggcggcgccaagaagagg
aagaagaagtcctacaccacacccaagaagaacaaacacaagaggaagaaggtcaagctg
gccgtgctcaagtactacaaggtggatgagaacggtaagatccaccgtctgcggcgcgag
tgtccagctgacgagtgcggcgccggcgtcttcatggcgagtcactttgaccgccattac
tgcggcaaatgctgcctgacctactgcttcaacaagccggaggacaagtag
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integrated database retrieval system
