Xiphophorus couchianus (Monterrey platyfish): 114138183
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Entry
114138183 CDS
T05908
Symbol
srf
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114138183 (srf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114138183 (srf)
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
114138183 (srf)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
114138183
NCBI-ProteinID:
XP_027863094
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Position
22:18972826..19007046
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AA seq
597 aa
AA seq
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MLPSQVGSAPSGNGSASGRTATAHGPGIRPVLVRTGQALPGVGESGGAAGRQGEREAAGM
LGANGPGGSRGARPGNGAGLNPLQTAVQGGIVGLNPGVVMPHGARFDPDRDSAPLCSGSD
NDSDSGDEDDPVGSLGDSRRGVKRERGEMEGAAAGQELGVPPGGYGMVTGGVAGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRSDPSMDQRMSATGFEETDLTYQVSESESMGDT
KDTLKPAFTVANLPGTTSSTQSTVPTTSTTMQVSTGASFPITNYLAPVSTSSNISANGTV
LKTAGASTGVMQLPSGFTFMSAGTPLPPSTPTIPLSQLQQHFLALQGQHGQTLAAAPQAQ
QGQQAVLRFPAAVSLTGAGVPQQLQAIQVHPNTQPNSNSDSSPEISHTSANSTATVSLPA
TIVTSSVPTSVPGHMMYPSPHTVMYASTPALADGGLAVLNAFSQGTQAMQVSHAHSQDTG
AVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSSNLTELQVVNLDTTQSTKGD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgttacctagccaggtcggatcggcaccatctggaaacgggtcggcatcgggcaggact
gctacggcacacgggccggggattcgtcccgttttggtccgaactggtcaagccttaccg
ggggtcggtgagagcggcggagctgcggggcgacagggggagagagaggctgccgggatg
ctgggggcaaacgggccagggggttctagaggggcaagaccggggaacggggccgggttg
aaccccctgcagactgccgtccaaggaggcattgtggggttaaaccccggggtggtgatg
ccccatggagcccgcttcgacccggaccgggatagtgctcctctatgcagcggctcggat
aatgattcggactctggagacgaggatgacccggtgggttcactcggggacagcaggaga
ggggtgaagagggaaaggggggagatggaaggggcggcggcgggacaggagctgggagta
ccccccggagggtacggcatggtgaccggaggagttgccggggcgaagccggggaagaag
acacgtgggcgggtaaaaataaagatggaatttatcgataacaagttgagacgctacacc
acgttcagcaagaggaagacgggcattatgaaaaaggcctatgaactctcgaccctgacg
ggaacccaggttctgctgctggtggccagcgaaacgggtcatgtctatactttcgccacc
cggaaactccagcctatgatcacaagcgaaacgggcaaagccctgatccagacatgcctt
aactcgccagactctccgccgcgctccgacccctccatggaccagcgcatgagcgccaca
ggctttgaggagacagacctcacctaccaggtgtcggagtcggagagcatgggtgatacg
aaggacacactgaagccagcgttcactgtagccaatctaccgggcacaacgagcagcact
cagtccacggtacccaccacctccaccaccatgcaggtgagcactggtgcgtcgtttccc
atcaccaactacctggcgcccgtctcgaccagcagcaacatcagcgctaatggaaccgtc
ctcaagacagccggcgcctcaacaggagtcatgcagcttcccagtggcttcaccttcatg
tccgcaggcactcctctcccccccagcacccccaccattcctctgagccagctgcagcag
cactttctggccctccaggggcagcatggtcagaccctggccgccgccccgcaggcacag
cagggacagcaggctgtcctccgcttccctgctgctgtctccctcacaggtgcaggcgtt
cctcagcagctccaggccatccaggtccatcccaacacacagcccaactccaacagcgac
agcagccccgagatctcccacacctccgccaactccaccgcaacggtgagtctcccggca
accatcgtcacttcgtcagtgccaacgtctgtgccgggccacatgatgtaccccagccct
cacacggtgatgtacgcctccacgccggcgctggccgacggggggctggccgtgctcaac
gccttctcccagggaacccaggccatgcaggtgtcccacgcgcacagccaagacacaggt
gccgtccctcaggtgttcctcacagcacctcccggcacggtgcagatccctgtctcagca
gtgcagctacacccaatggtgattggccagcagtcgagcggcagcagcagcagtaacctg
acggagctccaggtggtcaatctggacacgacacagagcacaaagggcgactga
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