Xiphophorus couchianus (Monterrey platyfish): 114138212
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Entry
114138212 CDS
T05908
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114138212
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
114138212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
114138212
NCBI-ProteinID:
XP_027863137
LinkDB
All DBs
Position
22:26518572..26531755
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AA seq
1783 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSGSSSSATTSSTTNPAAPSRRPSVFERLGPSTGSNAADSHCR
NWLKTGTCSYGNTCRYTHGTQPRSKGFTFSRTTERPTGDLRERMKNKRQDVDPENLKRDL
DEPTSPTVRQRDPSRGRHREKEDIKITKERTPASEEEPAEWETNREDSDIGDYDYELSLE
MKRQKIQRELMQLEQENLDKREDIVIKKDEAPAKTRSTGLPKVSDELLSSKESPVSRKSS
GSPKHKSGVKGVGSGKKEKKLALALAVSETTRPTKASHSKKKGPRTPSPPPPVPLDIPVV
GKKHKGKHKNKEKTEEKQKEGKDRGRDTEKHKEKKEKRRDRSESSHKAKRALTSEEHSGS
VSSPSRDSSPPARKKSASPKASHKASSLAFPPQRSPSPLRHQRSPTSPRHHSSSSQSGSS
AHRLSPSPRRRRSSSPSYHRSSAVQVTASSPLHSRRSRSPPASHDASSPHRRSNRSSPAR
HHSRGRERSRGDRERTPPIQERRHDHRDESRSKREKDRDDRDYDSEVRDDRETREARERR
DARERARETTRDSRDNRDGRDLKDSREIKAETRSSRESLERRDREREKERGREKERSDAY
RKEEPPPDDRAYGRGHGRDDGGRTESKMDRTERNGRGRGRANEASDKGSNRNSRSSQLDS
GYDNWESRSSTVRDRSAERSGNERGSDRTSDRDRYESDRRDHARDSSYDRRGGHGERDHR
DNRDRGSPNRYQRRSEESERDERRTDRAEDRRDDRAREREREREKEKEREREREKEREKE
REAERERARERVREREREREREEREREREREREEREREREERERERERKEREREREQRER
ERQREWEERERGREERRERREDSRDERKMSRKRLRVESSPSPQPLPKRAARDFSPADSDG
YNSGEDKSERPTGRGPAKLHPQPLLPSPVCLPPSDSGDKHRLLSQVVRPQDRLSRSPPRS
AASSEKATYWKDEDRRGARDKRDARGCHDELETRADRGRGGERRGEYLPDATADSRGRGR
DQRESTPPPPLAATPVGSEDATVQSHEEGKKKTKMQRKGVKKGRKEEDIPVGAAPAPTEP
PASVSADVPPPLHSPRKGAKKKGHERKRKRSPGGESDASEEETAVQAAPSKRKRGPRTPP
PSMRPDRHGAATTNTERSPLSKTNNFSDWSDEEESDRGGVADTQAPPPPAERTPAEPLRR
VAGHRMGRDRDRGGAPPIAPLLSPDPPMLLQTLTLQPLMSQPLLRKPPPEPVRSSSMGSN
QSRASSRRPRSPSSESAHLDDPQGPRLCRGRLQGSNSRDRDRERERERERPMVGDPPGAE
RKSRIDQLRRGEPSRSTSSDRQDSRSHSSRRSSPDSERQGRSRSRAGSYDSREREPFERE
RDRKDFRPQQNQQQPPPLHLQQPVQPQRDWEPEPRDWPSRGRDPMLMRPGWEPLPRGERG
ERDIRERERLLPEGLVQQHERERERERDRDVRGDRGADRERERVMMDLPPHGDLRAAARG
DARGDIMRSDFEPLLPREAFSSPEPEKSSNSHHPAGDQREPEKTESIDGEDDGKEDEQSI
ASVGEEYEPISDDELDEILADSQKKEDQQEEEKITGPLDVIDVDWSSLMPKQKQEPRAAG
AALLRFTPGAVLLRAGISKRLAGPELLEQVKEVCKSELDDPKDTDKLFEHDLGALNMAAV
NRRVERAGLLSNLGPCCKALCARRDFAIRRQLLKNEKGQTKQYPTTPVVDNELLQMSIRL
FRRTMAGQTSAPERSESGAVPAGEAAETGSSKLSTAQPEVCVS
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtgacagtggagaattcaaaaaccatttcggacagcggg
agcagcagcagcgccacaaccagcagcaccaccaaccccgccgccccctctcgccggccc
agcgtgtttgagagactcggtcccagcacggggagtaatgctgctgatagtcactgcaga
aattggctgaagacaggtacctgcagttacggcaacacttgccgctacacacatggaact
cagccacgaagcaaaggattcaccttcagccggacaaccgagaggcccacaggtgacctg
cgggagaggatgaagaataaaagacaagatgttgacccggaaaacctaaagcgagaccta
gacgagcccacatcccccacagtgagacagagagatccctctagagggcgacacagagag
aaggaggacataaagatcacaaaggagcgtaccccggccagtgaagaagagcctgcagag
tgggaaactaatcgtgaagattctgatatcggcgactacgactacgagttatccctcgag
atgaagcggcagaaaattcagcgagaactgatgcagctggagcaggagaacctggacaag
agagaagatatagtcatcaagaaagacgaggcccccgccaaaaccagaagcacgggtttg
ccgaaggtctctgatgagctgctgagctccaaagagtcgcccgtgtccagaaagtccagc
ggctccccgaaacacaagagtggagtcaaaggggtggggtctgggaagaaggagaagaag
ctagcactggcattagctgtgtcagaaacaaccagaccaacaaaagcgagccacagcaag
aaaaaaggcccccgcacgccgagtcctcctccccctgtcccgctggacattcctgtggtc
gggaagaagcataaaggcaaacacaaaaacaaggagaagaccgaggagaagcagaaggaa
gggaaagatcggggcagagatacggaaaaacacaaagagaagaaggagaaacgcagggat
cgttcagagagttcccacaaggccaagcgtgcgctgacgtcagaggagcattcgggcagc
gtgtcgtctccctccagagactcttcgcctccagctaggaagaaatcagcttctcccaaa
gcgtcccataaagcctcgtctctagccttcccccctcaaaggtctccttccccgctgcgc
caccaacgcagccccacttccccccgccaccactcctcctcatcccagtcaggctcctcc
gcccatcgtctctccccctcccctcgccggcgccgctcctcctccccctcctaccatcgg
agctccgcagtgcaggtcaccgcttcttcgcctctccactctcgtcgctcccgatcgcct
cctgcctctcacgacgcctcctccccacaccggcggtccaacaggtccagccccgcccgc
caccactccaggggcagagagcgaagtcgcggcgaccgagaacggaccccgcccatccag
gagcgcagacacgaccacagagacgagagccgcagcaaacgggagaaggatcgcgacgat
cgcgactacgactccgaagttcgagatgatcgggagaccagagaggcccgcgagcgacgt
gacgctcgtgagcgagcgagagaaacaacccgagattcccgtgacaaccgagacggcagg
gatttgaaggactccagagagattaaggcggagactcgctccagccgggagtcgctggaa
cgccgcgaccgcgaacgagagaaggagcgtgggagggaaaaggagcggagtgacgcctac
aggaaggaggagccgcctccggacgacagggcttatggacgaggtcacggacgggacgac
ggagggaggacagagagcaagatggacagaactgagaggaacggcagaggaagggggcgt
gccaacgaagcctctgataaaggctccaacagaaactcccgcagctcccaactggacagc
ggctatgacaactgggagtcgcggagcagcacggtccgagaccggagcgcggagcggagc
ggcaacgagagaggctcggacaggacttcggatcgggaccgctacgagagcgaccgcaga
gaccacgctagagactcgtcctacgaccggaggggggggcatggagagagggatcaccgg
gacaaccgagacagaggttctccaaacagatatcagaggagatctgaggagtcagagagg
gacgagcggaggacggaccgagcggaggacagacgggatgacagggcccgcgagagggag
cgagagagggagaaagagaaggagcgagagagggagagagaaaaggagagggagaaagaa
agagaggcagagagggagcgggccagggagagagtgcgagagagggagcgggaaagggag
agggaggaacgagagagggagcgggaaagggagagggaggaacgagagagagagagggag
gagcgggagagagagagggaaaggaaagagagggaaagagagcgagaacagagggagcgg
gagaggcagcgagagtgggaggaacgagagagagggagggaggagaggcgggagaggaga
gaggacagcagggacgagcggaagatgagtcgtaaaaggctccgggtggagagcagcccc
agcccccagcctttgcccaagcgagcggcgcgggacttcagcccggcggacagcgacggc
tacaatagcggcgaggacaaaagtgagcgcccgaccggccgcgggccggccaagctccac
ccacagcccctcctccccagccccgtgtgtctgcctccatctgacagcggggataagcac
cgtctgctgagccaggtggtgaggcctcaggaccgcttgtcccggtcgccgccacgaagc
gctgcgtcgagtgaaaaggccacttactggaaagacgaggaccgccggggagccagggac
aagcgggacgcacgcggctgccacgacgagctggagacgcgcgcagatcgaggccgagga
ggcgagaggcggggggagtacctccctgatgctacggcggactcacgcggccgaggccga
gaccaaagagagtcaactccaccgcctccacttgcagcgactcccgtcggcagcgaagac
gccaccgtccagtcccacgaggaaggcaaaaagaagacgaaaatgcagaggaagggtgtg
aaaaaagggcgtaaggaagaggatattcctgtaggggccgctcctgctcccacagaacct
ccagctagcgtgtctgcagacgttcctccgcctttacattcgccgagaaaaggagccaag
aagaagggacatgagaggaagaggaagcggtcgccaggcggggagtctgacgcgtcagag
gaggagacggccgtccaggcggcgcccagcaagaggaagagaggcccccggacgccaccg
ccgtccatgaggccagatcgtcacggagccgccaccacaaacaccgagcgctccccactt
tccaaaacaaacaatttcagcgattggtccgatgaggaggagtcagacagaggaggagtg
gcggacacacaagctccaccccctcccgctgagaggactcctgccgaaccgctgaggagg
gttgccggacacaggatgggccgagaccgggaccggggtggcgcgccacccatcgctccg
ctgctctccccggacccccccatgctgctgcagactctgacgctgcagccgctcatgtcc
cagccgttgctgcgaaaacctccgccggagccggtgcgcagcagcagcatgggcagcaac
cagagccgggcgtcgtcccgccgcccgcgctcgccttccagcgagtccgcccacctggac
gaccctcaggggccccgcttgtgccgcggccggctgcagggctccaactccagagaccgg
gacagagagcgggagagagagagagagcggccgatggtgggcgatcctcctggggccgag
aggaaatctagaatcgatcagctgcggagaggggagcccagccgcagcacctcttcagac
cgtcaggattcccgcagccacagctccagacgcagctctccggactctgagaggcagggc
aggtcaaggtcgcgagctggctcctatgacagtcgagaacgggagcctttcgagcgagag
cgagatcgtaaggacttccggccccagcagaaccagcagcagccgccgccgctgcacctc
cagcagcccgtccagccccagagagactgggagccagaacccagggactggccgagcagg
ggtcgcgaccccatgctgatgcgtcccggctgggaaccgctgccaaggggtgagaggggc
gagagggacatccgggagcgcgagcggctgctcccggagggcctcgtccagcagcacgag
cgagagcgcgagagggagcgtgaccgagacgtccggggcgatcgaggtgcagatcgagaa
cgggagagggtgatgatggacctgccgccgcacggcgacctgagagctgcagcgcgagga
gacgcgagaggtgacattatgaggagcgacttcgagcctctgctcccaagagaagccttc
agttctccagagccagagaaatccagcaacagtcaccatccagctggagatcagcgtgag
ccggagaagacagaaagcatcgacggagaggatgatggtaaagaagatgagcagtccatc
gcttctgttggagaggagtatgaacccatcagcgacgatgagctggacgaaattctggcc
gacagccagaaaaaggaggatcagcaggaggaggagaaaatcacaggtcccctggatgtg
atcgatgtggactggtccagcttaatgcccaaacagaagcaggagccgcgggcggcgggt
gctgctctgctccgcttcacgccaggcgccgtcctgctgagggcgggcatttccaagcgc
ctcgcaggcccagaactcttagaacaagtcaaagaagtgtgcaagtcggagctggatgat
cccaaagacactgacaagctctttgagcatgacctgggagcgctgaacatggctgccgtg
aacagacgggtggagagggccggtttgctgagcaacctgggaccctgctgtaaggcgcta
tgcgctcgcagggactttgccattcgccggcagttgttgaaaaacgaaaagggtcaaacg
aagcagtaccccactacacctgtggtggacaacgagctgctccagatgagcatccgtctc
ttcagaaggaccatggcgggtcagacctctgccccggagaggtcagagagcggggcggtt
ccggcaggtgaggctgctgaaacgggcagcagcaagctgagcacagctcaaccagaggtt
tgcgtgtcctga
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integrated database retrieval system
