Xiphophorus couchianus (Monterrey platyfish): 114138359
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Entry
114138359 CDS
T05908
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114138359
Membrane trafficking [BR:
xco04131
]
Endocytosis
Others
Others
114138359
Endosome - Lysosome transport
114138359
Endosome - Golgi transport
114138359
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
114138359
NCBI-ProteinID:
XP_027863374
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All DBs
Position
22:complement(8981758..9043318)
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AA seq
1231 aa
AA seq
DB search
MTLWSFWSCFLLAFIQLFPFHLKLATRAEISFPRLANRLYPMEVTSPMGHMIRKSAGIKV
SLKVNDRNEVLHMSETDGPPRPKYKQEVKNETVITNGSTVNNFSTLKIPDKKCDNISTAV
IETPKATFSIGERKKRSVGVSYNEHLDRSITGEARRSVRTVQGASNFRSEYRRTGEESRG
SNPKQSEPHLDTSTFALSGDSTHNQAMVHWSGQNSSVILILTKLYDLTMGTVTESSLWRS
TDYGSTYTKLNDKVTSRTVLSYLYVCPTNKQKILMLSDPEVESTVLISSDEGASFEKFPI
NFNVLSLLFHPAQEYWILAYSHDYKLYSSMDFGKKWQLVHENVMPGRFYWAVMGLDRESD
VVHIETRIAKGRAQYVKCRAQRCTEGDRQYLFPGHIDTNSLVVQDEYVFTQVTKSGRASY
FVSYMRESFRQMKLPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYSLYISDSPGVYFIL
SLENLRTSRGPAGNLLVDFYKVEGINGMYLANKIVDNHIKTFITYNKGQTWALLPAPATD
VSGKNLHCILPFCSLHLHLEMSENPYTSGPITSKKSVPGIIVATGNIGNELSSTNLGMFI
TSDAGNSWRQIFDEEYNIWFLDNGGALLAVLHAAMPIRQLWISLDEGKKWDRHSFSLVPL
YVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYKGLFSRRCMDGDYQTWSLHNKEEQC
VMGEKQKYMKRRPGNRCMLAQDYSRIYSSEPCPCNSYDFECDYGWERQADGKCSPAFWFN
PNGVAKSCSSSQSFLNSTGYRKVLSNNCKEEGRNVYLPKRVACQPKSPQGLHLSTSHGEL
SAAIESNVTFMIHLDNGESPSTSIQLDFGDGIKITYSNLSRTDDGIKHIYRKTGIYRVIA
TAENNLGSDSSALFLHITSPVDRVYLSAPIVAIREKAANLTAVVWPSHTRTLTFFWWFEN
SSEPIITLEGSISHMFLREGENKVTVQVACGSSVLEDSKVITVKEFFRSLLLSFSPALDE
HNPDIPEWREDIGRVVRTALSQQVSGVSESQLMVSLYPGLPTTAELFILSDEQMSSEHKK
RSEEALDTISDIFVTALNQGLVHFELKANIHIVVSMTQQTLAPLVDSNSIHSGPAMLMLI
SVVFVGIAAFFIYKFKRKIPWIHVETEDPHEKDPEVISTVGQNDAMSKVKLSEFPSQKEL
MDKELEGRSRGGFGRNMERIVTREFPNCTNV
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgacactttggtcattttggagttgctttcttttggcgttcattcagctattccccttt
cacctcaagttggcgactcgggcggagataagttttcctagactggcaaacagattgtac
cccatggaggtaacgtcgccgatgggacatatgatcagaaaatcagcggggatcaaagtc
tcgctgaaagtcaatgaccgcaatgaagttttgcacatgtctgaaactgacggacccccg
agaccaaaatataagcaggaggtgaaaaatgaaaccgtgattacaaatggctcaacggta
aacaatttcagcactctcaaaataccagacaaaaagtgtgacaatatttcgacggcagtg
attgaaacacccaaagccacattttcaatcggggaaaggaagaaaagaagtgtcggcgtg
tcctacaacgaacatttggacaggagtatcactggggaagcgcgcaggtccgtgagaact
gtccaaggtgcttcgaacttcagaagcgagtaccggcgcacgggggaggaaagcaggggc
tcaaacccgaagcagagcgagcctcacctggacacctccacttttgctctgtcgggggac
tcgacgcacaaccaggcgatggtgcactggtccggccagaatagcagtgtgatcctgatt
ttgactaagctgtatgacttaaccatggggaccgtaaccgagagctcactctggagatcc
actgattatggcagcacctacaccaaactcaatgataaagtgacctccaggacagtttta
agctacctgtatgtctgtcctaccaacaagcaaaagatattgatgcttagtgacccagag
gtagagagcactgttctcatcagctcagatgaaggggcaagcttcgagaagtttcccatt
aacttcaacgtcctcagcctcctcttccaccctgcacaggagtactggatcctggcttac
agtcatgactacaagctctacagctcaatggactttgggaagaaatggcagcttgtccac
gaaaacgtgatgccaggcagattctactgggcggtaatggggctggacagagaatcagat
gtggtccacatcgagacgcgcatcgcaaaaggccgagctcagtatgtgaagtgcagagcc
cagagatgcacagagggcgacagacagtatctctttcctggacacatagacaccaactcc
ctcgttgtgcaggacgaatatgttttcacccaggtaaccaagtcaggacgagccagttac
tttgtctcctacatgagggaatccttcaggcagatgaaattaccaaagtactgtttgccg
aaggacatgcatattatcagcacagatgagaagcaggtatttgctgctgtccaggagtgg
aaccagaacaacacttacagcctgtatatctcagactcccccggcgtctactttatcctt
tcattagagaacctgaggaccagcagagggcctgctggtaacctactggttgacttttac
aaggttgagggcataaacggaatgtatcttgccaacaaaatagtggataatcatattaag
actttcatcacatacaacaagggacagacatgggctctgctgccagcgccagcaacagat
gtgtcaggaaaaaaccttcactgcattttgccattttgctcgttgcatctccatctggag
atgtcagagaatccctacacatctgggcccatcaccagcaaaaaatctgtcccaggaatt
attgtggccacaggaaacattggaaatgagctgtcctctaccaaccttgggatgtttata
acatcagacgcagggaatagctggagacagatttttgacgaagagtacaatatttggttt
cttgacaacggaggagctttgcttgcagttcttcatgcggcaatgcctattagacaacta
tggatcagtcttgatgaagggaagaaatgggatcgccacagtttttccttggtgcctctg
tatgtggatggagttttaatggagcctgagtctgacaatcacattatcacttttttcgga
cacttcagccaccgttcagagtggcagctgatcaagattgactacaagggtctttttagc
aggagatgcatggacggtgactatcagacatggtccctgcacaacaaggaagagcagtgt
gtgatgggtgagaagcagaagtatatgaagcggcggcctggcaaccgttgcatgttggct
caagattattccaggatctactcctcagagccgtgtccctgcaactcctatgatttcgaa
tgtgactatggctgggagcgccaggcggatgggaagtgctctcctgctttttggtttaat
ccaaatggtgtggctaaaagctgcagctccagccaaagcttccttaacagcacagggtac
cgtaaggttttgtccaataactgtaaggaggaaggaagaaatgtgtacttgcctaagagg
gttgcatgtcaacccaaatcaccccagggcctgcatctgtccaccagccacggagaactc
agtgctgccattgaaagcaatgttactttcatgatccaccttgataatggagagtctccg
agcaccagcatccagctagacttcggggacggaatcaagatcacatactctaacctgagc
cggaccgacgacggcatcaagcacatctacagaaagactgggatttaccgtgtgatagct
actgcagaaaacaacctgggatctgacagcagcgcactttttttgcacatcaccagtcca
gtggatcgtgtgtatctctccgctcctattgtggccatcagggagaaagcagctaatctc
acggcagtagtttggccaagccacacaagaactctgaccttcttttggtggtttgaaaac
agctccgagcccattataactctggaaggaagcatctcgcacatgtttctcagagaggga
gaaaacaaggtcacggtccaggttgcttgtggaagcagcgtattggaagactcaaaagtt
ataactgttaaagagttcttcaggtcactgctgttgtcgttttcaccagctcttgacgaa
cacaatcctgacatccccgagtggagggaggacataggccgtgtggtgcggacagctctg
tcacagcaggtgtccggggtttctgagagtcagctgatggtgtctctgtaccctggactt
ccgaccacagctgagctttttattctgtctgatgagcaaatgtcaagtgagcacaagaaa
agaagcgaggaggctttggatacaatatcagatatttttgtcactgccctgaaccaaggc
ctggtccattttgagctaaaagcaaatattcacattgtcgtgtccatgactcagcaaacc
ttggcgccactggtggattcaaactcaattcacagtgggcccgcaatgctaatgctgatc
agcgtggtctttgttggtatagctgcattttttatctacaaattcaaaaggaaaattcct
tggatccatgtggagactgaagacccccatgagaaggatccagaggtgataagcacagta
ggtcaaaacgatgccatgtccaaggtcaagctaagcgagtttccgtctcagaaagaactc
atggacaaagagctggaaggcagaagcagaggaggatttgggagaaatatggagagaatt
gtgacaagggaatttcctaattgtactaacgtctaa
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