Xiphophorus couchianus (Monterrey platyfish): 114138404
Help
Entry
114138404 CDS
T05908
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114138404
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114138404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1
UBA_N4BP1_C
Cellulase-like
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
114138404
NCBI-ProteinID:
XP_027863432
LinkDB
All DBs
Position
22:26583940..26596607
Genome browser
AA seq
930 aa
AA seq
DB search
MGQKDHVEAGAVLDLAPDLEYLHVAGADRQAGGLDGPPAMEEQAESFTTTTAVCSLPEES
GGSDGECKTAPPATADSDRGEVSCTSSKNTHQPLCRTPCVDLGTEGPPEPPSDPSGEPER
EPAEPPADCPAPEPEPKLAGKDYQAKLEFALKLGYSEETVRQVLSKLGPDTLINDILGEL
VKLGTKPDSEQPAGILTSTSSSSSSSSCGCSDVLDGQRSDSPLPTESVCDQDNLRPIVVD
GSNMAMSHGNKEVFSCQGIQLAVDWFVERGHQEITVFVPAWRKEQSRPDAPITDQEILRR
LEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFID
ERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPILPEQKKQPCPYGKKCTYGHKCKYY
HPERGAQPQRAVADELRASAKSCVPSKNQGDAGLVKSHSVPAGTIEAKNGAPKRQSDPSI
RALSYSDAEEKLLVKSRLESQKSNTGGSSSNSSSSNISCSGGLAVSSALAGPSPGFGLLQ
DQQSRSGTHLPAPSHDLYPHCETPDLSYFSVTRAYSGLSLSSRRSPDCRYPKDPELRLGS
MGSTGSECGSESSISCGSSDSYSDRSCPGCPPEPLLEESVHFPNPAGRLYAHHIASNHEL
CGLHAADYPSIQHNHTSNPAVQSYHLNAACGQSCVHEQPPPEGPPKRPLYPLPPHLQHQP
LAARSSCPGDYHSLPQSNHQPPGSPIGRCLAPTRSESVSDSHLYEHLSASHHHHRPKTLP
SWETYYRQPSLPPSRYEPSAYQSLPDTHQSSWHPAPWPQEGYSSSHPALHLSPTRYLGHP
PPPALSPHPPYPPHSSHLALLSHPPPPYGPQHPESPVHCRYEDVREKVYVDLCNIFPSEL
VRRVMARSPHVTDPQQLAAAILAEKAQSGY
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcgggagcagtcctcgacctggcgccagacctggag
tatctccacgtagcaggggccgaccggcaggctggcggccttgacggaccccctgctatg
gaggagcaggcggagagcttcaccaccaccaccgctgtttgttcccttccggaggagagc
ggtgggtctgatggcgagtgcaagacggcgccgccggccacagcagactcagacagagga
gaggtcagctgcacttccagtaaaaacacccaccagccgctgtgccgcacgccatgtgta
gatctgggcacggaggggcctccggagcctccgtcggatccctcaggagaaccggagcgg
gaaccggccgagcctccggccgactgccccgcaccagaaccagagcccaagctggcgggg
aaggactaccaggcgaagctggagtttgccttgaagctgggttactctgaagagactgtg
cgccaggtgctgtccaagcttggacccgacaccctcatcaacgacatactgggcgaattg
gtcaaactgggcaccaaacctgacagcgagcagccagcgggaatattgacttctacctca
tcgtcttcatcatcctcgtcttgtggctgctctgatgtgctagatgggcagagatcggac
tctccactacccacggagtctgtctgtgaccaggacaacctgcgaccgatcgtggtggac
ggcagcaacatggccatgagtcatggaaacaaggaggtgttttcctgtcagggcatccag
ctggctgtagactggtttgtggagcgcggccatcaggaaatcacggtttttgtgcctgct
tggaggaaagagcagtcccgccctgatgctccaataacagatcaggagatcctgcggcgc
ctcgagaaagaaaagatcctggtcttcaccccctcacggcgcgtccaaggccggcgcgtg
gtctgttatgacgatcgcttcatcgtcaagctggcttatgagtcagatggcatcatcgtc
tccaatgacaactacagagacctggctaatgaaaagcctgagtggaaaaagttcatagac
gagcggctgctcatgtattcctttgtcaatgacaaatttatgcctccagatgatcctctc
ggacgtcacggccccagcctggacaacttcttgaggaaaaggccaatcctgcctgagcag
aagaaacaaccctgtccatatgggaaaaagtgcacgtatggccacaagtgcaagtactac
caccctgagagaggagctcagcctcagcgcgccgtggccgatgagttgcgtgccagtgcc
aagagctgcgtcccctccaagaaccagggggatgctggactggtgaagagccacagtgtg
ccagctggcaccatcgaggcaaaaaacggtgccccaaaaaggcaatcggatcccagcatc
cgagctctgtcgtacagtgacgctgaggagaagctactggtgaaaagtagactagaaagc
cagaagagcaacacaggtgggagcagcagtaacagttctagtagcaacatcagctgtagc
ggaggtttagcggtgtcttcagccctggcaggaccgtcacctggttttggtcttttgcaa
gaccaacagtccagatcagggacacacctaccggcccccagccatgatctctaccctcac
tgtgagactccagacttaagctacttctctgtaacacgggcctactctggtctgagcctc
tcctcccgacgaagcccggactgccgctaccccaaggatccggagctgcggctcggctcg
atgggctccacaggttctgaatgtgggagtgaaagcagcatcagttgtggtagcagtgac
tcatatagtgaccgatcctgtcccggatgccccccagaacctttattagaagaaagcgtt
catttccccaaccccgctggccgcctgtacgctcatcacatcgcttctaaccatgagctg
tgcggtctgcatgcggcagattacccaagcatccaacacaaccacacctctaatccagcc
gttcagtcctaccatctgaatgctgcgtgtgggcagagctgtgttcatgagcagcctcca
ccagagggaccccctaagcgacccctttaccctctgcctcctcacctccaacaccagccg
ctagctgcccgctccagctgccccggcgactaccactctctgcctcagtccaaccatcag
ccccctggatctcccattggccgctgcctggcccccactcgcagtgaaagtgtgtccgac
tcgcatctgtatgaacatctctctgcgtctcaccaccaccatcgaccgaaaacgctgccc
agctgggagacttattacagacagccgtcactcccaccatcaaggtacgagccgtcagcc
taccagagtctgcctgacacgcatcagtcgtcctggcaccccgcaccgtggcctcaagag
ggctacagctcgtctcacccagctctgcacctgtccccgacacgttacctaggccacccg
ccgccaccagccctctcaccccaccctccttacccgcctcacagctcccatctcgctctt
ctgtcacaccctcctcctccgtacgggccgcagcacccggaatcccccgtgcactgccgc
tacgaagacgtgagggagaaggtgtacgtcgacctttgcaacatcttcccctcggagctg
gtgaggcgtgtgatggctaggagcccccatgtcacggacccccagcagctggctgccgcc
atcttggcagagaaagcacaaagtggctactga
DBGET
integrated database retrieval system
