Xiphophorus couchianus (Monterrey platyfish): 114138438
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Entry
114138438 CDS
T05908
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114138438
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114138438
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114138438
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Motif
Other DBs
NCBI-GeneID:
114138438
NCBI-ProteinID:
XP_027863490
LinkDB
All DBs
Position
22:complement(8298447..8306286)
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AA seq
738 aa
AA seq
DB search
MEQHMLSLSGECCFEGKSPCCSDSETLSQGDKEYDDILELNQFDGLPYSSRFYKLLKERK
ELPVWRAKDEFMDSLTKGQFVVLSGFAKTGRSSQIPQWCAEFCLSVRFQHGMVVCTQIHP
QQAVDLALRVADEMDINIGHEVGYTIPLETCCTSETFLRYSTDDMLLREMMSDPLLERYG
VVIVDQAHQRTVATDVLLGLLKEVALQRPELRVVLLSATKPDPKQLNLFTGSALPAIHLE
APEVGEVAYSSTGDNYFCSALRLVLEIHRSKEPGDVVVFLVTMQEIDLAHNILCHEKRGL
PPGLGELLPIAVHPDQPGSLPMFGEEEGQTRRVFLTSSPNEDFFWAYSSINFVIDAGVEK
KYVYNPRIRTNSVIIQPISSGQSECRKQLAGPTGKCFHLYPKERQLPAKIRPRIVESDIT
STVLFLKRMEIAGLSHCHFIDRPDPGGLMQALEELDYLAALDNDGNLSEMGIIMSEFPLE
PQMAKTVLASCEFDCVNEVVIIAAMLAAPSCFMVPAVELKPEAAQYRMKFQHPEGDHFTL
INIFKAFKQCQQDEYCDEEKWCQDFFFNHTALLTADALRTELTDTLRRIELPVSTPAFGC
RGNTVNIKRALLAGFFMQVARDVDGSGNYFILTHKHVAQIHPMSGYGAKSPKLGLPEWVL
FHEHTFSDDNCLCTVTHITPEEFVQMTPQYFFYNLPSSESKDLLQNILNGGASQNEEDKS
SSSQEPQEDQTSDRCVIQ
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacacatgttgagcttgagtggagaatgctgcttcgaagggaagtccccgtgt
tgttcagactccgagactttgagtcagggagacaaagaatacgatgatatcctggagctt
aatcagtttgatggacttccttactcatcaaggttttacaaactgctaaaagaaaggaaa
gagctgccggtgtggagagcaaaggatgaatttatggattctttgaccaaaggacagttt
gtggttcttagtggctttgccaaaactggaagaagctctcaaattccacagtggtgtgct
gaattctgcctctcggtccggttccagcatgggatggtggtgtgcacccagattcatcca
cagcaggcggttgatctcgctctgagagtggccgatgagatggacatcaacatcggtcat
gaggtcgggtacaccattcccttggaaacttgctgcaccagtgaaactttcctcaggtat
tctacagatgatatgctgctgagggaaatgatgtcagaccctttgcttgaacgttacggt
gtggtgatcgtggaccaggcccaccagaggaccgttgctaccgatgtgcttttgggtctg
ctgaaagaagtcgccctgcagaggccagagctccgtgtggtcctcctgtctgcgaccaaa
ccggaccccaagcagctgaacctcttcactgggtcggcactgccagccatccacctggag
gccccagaggttggggaggtggcgtacagcagcacaggtgacaactacttctgttctgct
ctccgtctcgtgctggagatccatcgctccaaggagccgggggatgtggttgtgtttctg
gtgacgatgcaggaaatagatctggcccataacatcctgtgtcatgaaaagcgaggcttg
ccacctggtctgggtgagctgctgcccatagctgtacatcctgaccaacctgggagtcta
ccgatgtttggggaagaggagggtcagaccagacgagtgttcctcacaagcagtccaaat
gaggacttcttctgggcttatagctcaattaactttgttattgatgctggagtggaaaaa
aaatatgtttacaacccgagaatcagaacaaactctgtcatcatccagccaatcagctca
ggtcaaagcgagtgccgcaaacagctggctggtccaacaggcaagtgttttcacctttac
ccgaaagagagacagcttcctgcaaagattcgtcctcgtattgtggagtctgacatcacc
tccaccgtgctgttcctaaagaggatggagatcgccgggctgagtcactgtcactttatc
gacaggccagaccctggaggtctaatgcaggcactggaggagctggactacctggcagct
ctggataacgacgggaacctttctgagatgggcatcatcatgtctgagttcccactggag
cctcaaatggccaagactgtgctggcctcctgtgagtttgactgtgtcaacgaagtggtc
atcattgcagccatgctagcagcgccctcttgcttcatggttccggctgtggagctgaag
ccagaggcagcccagtaccgcatgaagttccagcacccggaaggagaccacttcaccctc
atcaacatcttcaaggctttcaaacagtgtcagcaggatgaatactgcgatgaagagaag
tggtgtcaggacttcttcttcaaccacactgccctgctgacggccgatgctcttcgaacc
gagctcactgacacgctgaggagaatcgagctgcctgtctcaacacccgcctttggctgc
cgaggcaacacggtcaacatcaagagagccctgctcgcagggtttttcatgcaggtggct
cgggatgttgatggatcggggaactatttcattctgactcataaacacgtggcacagatc
catccgatgtctggatatggagccaagagccccaagctgggcctaccggagtgggtgctc
ttccacgagcacacgttctcggatgacaactgcctctgcaccgtcacccacataacgcct
gaggagttcgttcaaatgacgccacagtactttttctacaacttgccatcgagtgagagc
aaagacctcctgcagaatatcctgaacggcggagcgtctcagaacgaggaggacaagagc
tcgtcaagccaggaaccccaggaagaccagacgtctgaccgctgcgtcatacagtga
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