Xiphophorus couchianus (Monterrey platyfish): 114138442
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Entry
114138442 CDS
T05908
Symbol
smoc2
Name
(RefSeq) SPARC-related modular calcium-binding protein 2 isoform X1
KO
K24354
SPARC-related modular calcium-binding protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114138442 (smoc2)
Glycosaminoglycan binding proteins [BR:
xco00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114138442 (smoc2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thyroglobulin_1
SPARC_Ca_bdg
EF-hand_7
Kazal_2
Thyroglob_assoc
EF-hand_6
EF-hand_1
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
114138442
NCBI-ProteinID:
XP_027863500
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Position
22:complement(23929168..23957599)
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AA seq
449 aa
AA seq
DB search
MRVWPLLALLCLMCAGRAQKFSALTFLRVDQDKECNMECTGASRKPLCASDGRTFTSRCE
YLRAKCRDPQLEVSRGPCKETSRCVAEKKYTEQQAKKQAFVPVCNPDGTYSEVQCHSYTG
YCWCVTPNGRPISGSSVVNKKPRCQGSKQDRAAPVEPRPGSKQDRGTSIDPKPVSLQIFS
ILNAEPIPVEPPSPPEEEDVTSPYPDLWSVHLNSNRQNRSRASPSSCDQEQQSALEERRQ
RNNDAVFVPDCAQGGFYKPVQCHPSTGYCWCVLVDTGRPIPGTSTRYEQPKCDGNARAHP
TKPKDHYKSRHLQGCPGAKKTEFLTSVLDALSTDMVHAVTDPASAGRMAEPDPSHTLEER
VVHWYFSQLDKNGSGDIGKKEIKPFKRFLRKKSKPKKCVKKFVEYCDISNDKALSLQELM
GCLGVTKEDGAKSGEDLPSSKLNPVRKQG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtctggccgctgctggctctcctctgcctgatgtgcgcaggacgcgctcagaag
ttctccgctctcacgtttctgcgggtggatcaggataaggagtgcaacatggaatgcacc
ggagcgtcgcggaagcccctgtgtgcctctgacggccggaccttcacatctcgctgcgag
tacctccgagccaagtgccgcgacccccagctggaggtcagccgagggccgtgcaaagaa
acatccagatgtgtcgcagaaaagaagtacacagagcaacaagccaagaaacaggccttt
gttcccgtatgcaaccctgacggcacttacagcgaggttcaatgccacagctacaccgga
tactgctggtgtgtcacacccaacgggcgaccaatcagtgggtcttctgtcgtcaataaa
aaacctcgatgccaaggttccaaacaggaccgagcagctcccgtagaaccgagaccaggc
tcaaaacaagacagagggacctccatagatccaaaaccagtctctttgcaaatattctcc
attctaaacgcagaacctatcccggtggagccaccatctcctccagaggaagaagacgtc
acttctccgtaccctgacctgtggtcagtgcacttaaacagcaaccggcagaacagatcc
agagcatcaccttcatcatgtgaccaggagcaacagtcggccctggaggagaggaggcag
cggaataatgacgccgtgtttgtgccagactgcgcccaaggcggcttttataaacctgtg
caatgccacccctccactggctactgttggtgcgtgcttgtggatactggacggccaata
ccaggaacttcaaccaggtacgaacagccaaagtgtgacggtaatgccagagctcatcca
actaaaccaaaggaccattataaaagcagacatctccaaggctgtcctggggcaaagaaa
acagagttcttgacgagtgttcttgacgcgctgtcgacagacatggtgcatgctgtcaca
gatccagcatccgccggaaggatggccgagcctgaccccagccacactctggaggagaga
gtcgtccactggtacttcagccagcttgacaaaaacggcagcggagacatcggaaagaag
gagatcaagcctttcaagcgcttcctgcgcaaaaagtccaagccgaagaagtgtgtgaag
aagtttgtggagtactgtgacatcagcaacgacaaggcgctatcgctgcaggagctcatg
ggctgcctcggggtgaccaaggaagacggtgccaaatcgggggaagacctgccttccagt
aaactaaaccctgtgaggaaacagggctaa
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