Xiphophorus couchianus (Monterrey platyfish): 114138482
Help
Entry
114138482 CDS
T05908
Symbol
hmgcll1
Name
(RefSeq) 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00280
Valine, leucine and isoleucine degradation
xco00650
Butanoate metabolism
xco01100
Metabolic pathways
xco04146
Peroxisome
Module
xco_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
114138482 (hmgcll1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
114138482 (hmgcll1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
114138482 (hmgcll1)
Enzymes [BR:
xco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
114138482 (hmgcll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DUF7221
Motif
Other DBs
NCBI-GeneID:
114138482
NCBI-ProteinID:
XP_027863578
LinkDB
All DBs
Position
22:complement(13723975..13735758)
Genome browser
AA seq
336 aa
AA seq
DB search
MGNVPTTVKHCLSYKQVIEEYPWFRSWLQEEKIITKHVYPEFVKIVEVGPRDGLQNEKEI
VPTRVKIQLIDMLSTTGLSVIEATSFVSSKWVPQMADHTDVVKGIQRVPHVQYPVLTPNI
QGFQNAVAAGATEVAVFGSASETFCRRNINCSISESMLRFEEVISTAKDRQIPVRGYVSC
ALGCPHEGHIEPSQVAEVAKKLYEMGCYEISLGDTIGVGTPGSMFKMLQKVMNDVPISAL
AVHCHDTYGQALPNILTALQMGVSVVDSAVAGLGGCPYAQGSSGNVSTEDVLYMLHGMGI
ETGVNLDKVIETGDFICNALGRRTNSKVAQARSRTL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacgtacccactacagtgaagcactgcctgagctataagcaagtcatcgaggaa
tacccttggtttagaagctggctgcaggaagagaagatcattaccaaacatgtctatcca
gagtttgtgaaaattgttgaagttgggccaagagatggacttcaaaatgaaaaggaaatt
gttccaacaagggtgaaaatccagctgatagacatgctctcaactacaggtctgtctgtg
attgaggccaccagctttgtctcttcaaagtgggtaccgcagatggcagaccacacagat
gttgtcaaaggaatccagagagtgcctcatgttcagtatcctgttttgactcctaacatc
caaggttttcagaatgccgttgcagcgggtgccacggaagtggctgtgttcgggtcggct
tctgaaaccttctgcagaagaaatatcaactgttctatttctgaaagcatgctgcggttt
gaggaggtcattagtactgccaaggatcgacaaatccctgttcgtgggtatgtttcttgt
gcccttgggtgtccccatgagggacacatcgaaccatcgcaagttgctgaggtagcaaaa
aagttgtatgaaatgggctgttatgaaatttccttgggagatactattggagttggtact
ccaggctccatgttcaagatgctgcagaaggtgatgaatgacgtcccgatcagtgctctt
gctgttcactgccatgacacttatggtcaagcacttcctaacatccttactgctcttcag
atgggagtctctgtggtggactctgcagtagcaggcctcggtggttgcccctacgctcag
ggttcatctggcaatgtttcaacagaggatgttctttacatgctccatggcatgggcatt
gaaactggagtgaaccttgacaaagtcatagaaactggtgactttatatgcaacgcttta
ggtcgcaggacaaactccaaggtggctcaggcaagaagcaggacactttga
DBGET
integrated database retrieval system
