Xiphophorus couchianus (Monterrey platyfish): 114138539
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Entry
114138539 CDS
T05908
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04136
Autophagy - other
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114138539 (atg13)
04136 Autophagy - other
114138539 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114138539 (atg13)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114138539 (atg13)
Membrane trafficking [BR:
xco04131
]
Autophagy
Autophagosome formation proteins
ULK complex
114138539 (atg13)
Atg1 complex
114138539 (atg13)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114138539 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
114138539
NCBI-ProteinID:
XP_027863678
LinkDB
All DBs
Position
22:27066739..27073696
Genome browser
AA seq
533 aa
AA seq
DB search
MDGDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFRSSRQFERSAPIMGIIVDHFVDAPCGNQRPITMGQPCNFRAPDED
DGGAFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHNL
YASRFSYQPAPIGGAAEFNAIQVKEGGNVLVPAQPQPPHGADVHLTVENAPNTPSSSGDE
DGLLQSGEGRRDDGRSVSPSDPVESLSAFTRKVGAFVNKPNTQITAASLDLPFAAFAPRG
LDSEENDPMVRPPDSPPSQSPLQASLHSQGSDGSGQQDDFVMVDFRPAFSKDDLLPMDLG
TFYREFQNPPQLASLSLHTSSQSMADDLDSLPEKLRVYEKNIDEFDAFVDMLQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacctgagtccacaggataagaaagacttggacaagttcatcaagtttttt
gccttaaagactgttcaggtgatcgttcaagctcgtctgggggagaagatctgcactcgc
tcgtcttcgtcacccactggctcagactggtttaatttggccatcaaagacatcccagag
gtcactcatgaggccaagaaggcgctggccggccaacttccaggcatcggccgatccatg
tgtgtggagatctccctaaagacctcagagggagactccatggagttagagacttggtgc
ctggagatgaatgagaagtgcgataaggacattaaagtgtcgtacactgtctataaccgg
ctgtctgtcctcctaaaatctctgctggccatcaccagagtgactcccgcctataagctg
tccagaaagcagggccacgactacgtcatattatacaggatctactttggggaagtccag
ctgggtggattaggagaaggtttccaaacggtgcgcgtcggtgttgtcggcaccccggtc
ggcacggtaacgctgtcatgtgcctaccgcaccaacctggcgttcaggtccagcaggcag
ttcgaacggtcggctcccatcatggggatcatcgtggatcactttgtggacgcgccctgc
ggcaatcagcgtccaatcacaatggggcagccctgcaacttcagagccccagatgaggac
gacggcggagcatttgctggagttcaggactctcaggaggtctgcaccacctccttctcc
acttcccctccctctcagtgtgtctgcactctgagtccgtccccttccaaactgtccaag
cccctcccactggacagtctccagctcccattggctccaggacttgtcactcacaatctc
tatgcttccaggttctcctaccagcctgcacctataggcggagctgctgagttcaacgca
atccaggttaaagaaggcgggaacgttctggttccggctcagcctcagcctcctcatgga
gcggatgtccatctgacggtagaaaacgctccaaacacaccaagcagcagtggcgatgaa
gacggcctgctgcagagtggtgagggaagaagggacgatgggaggagcgtctctccctcc
gacccagtggagtcactcagcgcgttcacaaggaaggttggggcttttgtgaataaaccc
aacactcagataacagctgccagtctggacctcccattcgctgcatttgctcctcgtggc
ctggactctgaggagaacgatcccatggtgcgtcctccggactctcctccctctcagtcg
cccctgcaggccagccttcactctcagggctcggacggatcgggacagcaggacgacttc
gtcatggtcgactttcgtccagctttctctaaagacgaccttttgccgatggatctgggc
actttctatcgagagtttcagaaccctccacagctggccagcctctcgctgcacaccagc
tcccagtcgatggctgacgacctggactctctgccggagaaactgcgtgtgtacgagaag
aacattgacgaatttgacgcgtttgtggacatgcttcagtag
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