Xiphophorus couchianus (Monterrey platyfish): 114138541
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Entry
114138541 CDS
T05908
Symbol
harbi1
Name
(RefSeq) putative nuclease HARBI1 isoform X1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114138541 (harbi1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Gene silencing
Transposable elements
114138541 (harbi1)
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GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
114138541
NCBI-ProteinID:
XP_027863682
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Position
22:complement(27062332..27071380)
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AA seq
352 aa
AA seq
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MRLKALSMAIPIAILDCDLLLHGRGHKTLERFDLDTVSNSVLLSNFGFPRDFILYLVELL
RETLSRRTLRSRAISPEVQVLAALGFYTSGSFQTSMGDIIGISQASMSRCVTNVTKALVE
KAPQFITFNKDPSNREYSFQEFQRVAGFPAVLGVLDCVQVAIKAPNSDASSYVNKKGFHS
IACQLVCNARGLLLSAETWPGGLQDTKILQRSAISKQLQDNEEGWLLGDGRYPLKKWLMT
PVESPGTAAEFQYNLAHTVTHEIVDRTFRAIQTRFRCLDGIKGNLQYSPERSSSILLACC
VLHNASLHSGLDAWTLERTEPLEQPKGPEQTLEDRDSEAEELRKHIILKHFS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagactaaaggcgctgagcatggccatccccatagccatcttagactgcgatcttctt
ctgcacggacgaggccataagactctggagcgctttgacctggacaccgtttcaaacagc
gttctcctctcaaactttgggtttccaagagacttcatcctgtatctggtggaattactc
agagagactctttccaggagaaccctgagatccagagcaatcagtcctgaggttcaggtg
ttggcagcgttgggcttctatacatctggctcattccagacgtccatgggggatataata
gggatcagccaggcgtccatgtccagatgtgtgaccaatgtgactaaagctctggtggag
aaagctccacagttcatcactttcaataaagacccgtccaacagagagtactccttccag
gagtttcagagggtggcaggatttccagcagtcctgggcgttctcgactgtgttcaggtg
gccatcaaagccccgaacagcgacgcctcctcttacgtgaacaagaagggctttcactct
atagcctgccagctggtctgtaacgcccgggggcttttactcagcgctgaaacgtggccc
ggcggcctgcaggacaccaagattctgcagaggtcagccatttccaaacagctgcaggac
aacgaggagggctggctgctgggcgatggacgttatcctttgaagaagtggctgatgaca
ccagtggagagcccaggaacagctgcagagtttcagtataacctggcccacaccgtgacg
catgagatagtggacagaactttcagggccattcagaccagattcagatgtttagacggc
atcaaagggaacctgcagtattctcctgagaggagctcgtccatcctcctggcctgctgc
gttctgcacaacgcctccctgcattccggcctggacgcctggactctggagaggacagag
ccactggagcagcccaaggggcctgagcagacgctggaggaccgggacagcgaggcggag
gagctccggaaacacatcatactgaaacacttcagctag
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