Xiphophorus couchianus (Monterrey platyfish): 114138602
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Entry
114138602 CDS
T05908
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114138602
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
114138602
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
COLFI
Motif
Other DBs
NCBI-GeneID:
114138602
NCBI-ProteinID:
XP_027863779
LinkDB
All DBs
Position
22:2159769..2205750
Genome browser
AA seq
1301 aa
AA seq
DB search
MGLWTSRRRGTNTWLVLMLVSWCVDINAETCRRPLVSSLSPSSFRSSSQLSSSHGPGFAK
LNRREGAGGWSPLDSDKYQWLEVDLGGRTQITSVSTQGRYGSSDWQTAYQLMFSDTGHNW
RQYRWEGRIGAFPGNSNADSVVQHNLQHPVIARFVRVAPLRWNSNGRIGLRLEAYGCPYN
SDTVSFDGDSSLIFKLTQRPRQTSTNTIHLTFKTMRNSGFLLHAEGRNELGLTLELQDGR
LLLLLRKGKSSRQHLVSLGSLLDDQHWHRIAVEQHSSHFNLTVDKNTKWVVIPPWFTHWD
YDQMTVGADQNLDSQNSIRNFHGCVENLLYDGQNLIDLAKQRDQSVTAMGNVTFSCSEPV
FVAVTFTGPRSFLRLPGDIGLHSAGVSLGLQFRTWDTEGLLLTFDLPKRDGTVWLHLRDA
KVHLQIHKAGRPPVELKAGSCLNDGQWHSVDLRSRRHLTVTVDGTEVASASPTYPITPGG
HLFYGGCPAEGNGRSCRNPSSAFQGCMRLLTVEDELVDLIKVQQRLMGDYSNLQIDMCGI
MDRCSPSYCEHGGSCTQSWSTFDCKCSGTGYGGATCHSSIYERSCEAYKHRGNTSGYYYI
DADGSGPIKPQLLFCNMTEDETWTVVQHNNTELTKIQPSTERSQHLTHFEYAADEEQLMA
TINQSEYCEQELAYHCRKSRLLNSPEGGPLSWWVGGPGTGQRQTYWGGALPGSQQCACSL
QENCLDPKRHCNCDADRTVWSSDSGLLTHKESLPVRSLVLGDVRRPGSESSYQVGPLRCY
GDKSIWNAAFFAKETSYLHFPTFHGELSADISLLFKTTSSSGVLLENLGIRDFIRLELSS
PTEVVFSFDVGNGPLEVSVKAGVPLNDDRWHRIQAERNVREASLRLDELPAATQEAPADG
HIHLQLNSQLFVGGTASRQKGFRGCIRSLQLNGVTLDLEERAKVTPGVQAGCPGHCGTYG
GLCQNQGRCVEGIRSFSCDCSSSAFTGAFCDQDVSVAFEPETSLSYSFEENLPNESNGSS
RSHLSPFLPNLNLRGENVSLSFRSAQSPALFLYVSSRRRQYLALLLNKQEQLEVRYRLES
SREEEILRSRVRSLANGQLHSVSVSRLADSVTIQVDQHSKEHFNMTSGVEFSDIRSLTLG
RVHNSQGLDPALAQLGSLGFAGCLSAILFNSISPLKAALLRPRAGSVVVRGPLIRSSCGP
AAANPHAAENTHHQPDQSGSVGGGQPLVNALRSDSALIGGLMVVIFGIVAALAILIRLLY
RRKGTCQNQELTKTEDSNRLQFTSQTISQFGPTESQKEYFI
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgtggactagccgaaggcggggaacaaacacatggctcgtcctgatgcttgtc
agctggtgtgtggacataaatgcagaaacatgtcgcaggccgctggtatcgagtttatca
ccgtcgtcattcagaagctcctcgcagctgtccagcagtcatgggccgggttttgctaaa
ttaaatcggagagaaggtgctggaggctggtctcctctggactcagacaaatatcagtgg
ttggaggtagacctgggtgggcggacgcaaatcacatctgtttctacgcaaggtcgctat
gggagctctgactggcaaacggcctaccagctgatgttcagcgacacgggacacaactgg
agacagtaccgatgggaaggacgcataggagcctttcctgggaacagtaatgcagacagt
gtggtccagcacaacctgcagcaccctgtgatcgctcgcttcgtccgcgtcgctcctctc
cgctggaattcaaacggtcggattggactcaggctggaggcttacggatgtccttacaat
tctgacacggtgagctttgacggcgacagcagccttattttcaagctgactcaaagaccg
agacagacgtccaccaacaccatccatctgacgtttaaaaccatgagaaactctggcttt
ctgcttcatgctgaaggacggaatgagctcggcctcactttggagttacaggacggacga
cttctgctgctcctcagaaaagggaagagttccagacagcatcttgtgtctctgggcagc
ctgttggacgaccaacactggcatcgtatcgcggtggagcaacacagcagtcacttcaac
ctcaccgtggacaaaaacacaaagtgggtggtgatcccaccatggttcacccactgggac
tatgaccagatgaccgttggagcagatcagaacctcgactctcaaaactcaattagaaat
ttccacggctgtgttgaaaaccttctctacgatggccagaacctgattgacttggctaaa
cagagggaccagagtgttactgcgatgggcaacgtgacattttcctgctctgaaccagtc
ttcgttgccgtgacgttcactggcccccggagtttcctgcggttgcctggggacataggt
ctgcattcggcaggggtctcgctggggcttcagtttcggacatgggacacggaggggctg
ctgctgacctttgatctcccgaagcgagacgggacggtatggctacacctgagagatgcc
aaagtacatcttcaaatccacaaggctggaaggccccctgtagagctaaaagcaggttca
tgcttgaatgacggtcagtggcattcagtggacttgagatcacgacgacatctgaccgtc
acagtggatggaactgaagttgcctctgcaagccccacataccccatcactccaggaggt
catcttttctatggcggttgcccggccgaaggaaacggccgctcgtgcagaaatccctcc
agtgctttccaaggatgtatgcgtctcctgacggtggaagacgaactggtggatctcatc
aaggtccagcagaggctgatgggagattacagcaacctccagatcgacatgtgtggcatt
atggacagatgttccccaagttactgtgagcatggaggcagctgcactcagtcgtggagc
acgtttgactgcaagtgctccggcaccggctatggtggagccacatgtcacagctctata
tacgagcggtcctgtgaggcctataaacacagaggcaacacatcgggatattattacatt
gacgctgacggtagtggacccatcaaaccacagctgctattctgcaatatgacagaagac
gagacgtggacagtggtccagcacaacaacacagaactgaccaaaatccagccgtccaca
gaaagaagtcagcatctgactcactttgaatacgctgcggacgaagagcagctaatggca
accatcaaccaatcagagtactgcgaacaggaactggcttaccactgcaggaagtcccgc
cttctcaattcgccagagggcggtccgctcagctggtgggtcggagggcccggcacagga
caaaggcagacctactggggcggggcccttccaggcagccagcagtgtgcctgcagtctg
caggagaactgcctggaccccaaacgccactgcaactgtgatgctgaccgcactgtgtgg
tccagtgactctggtctgctgacccataaggagtccctgcctgtcagatcgttggtacta
ggggatgtccggaggccaggatcagagagctcctaccaggtgggacccctgcgttgctat
ggagacaaaagtatctggaatgctgcgttttttgccaaggaaacgtcgtaccttcacttt
cccaccttccacggagagctgagcgccgacatctcgctcctgtttaagaccacctcatcc
tccggcgtcctcctggaaaacctgggcatcagagacttcattcgacttgaactcagctcc
cccacggaggtcgtcttttcctttgacgtgggtaacggcccactggaggtaagcgtgaag
gccggcgtcccgctgaacgacgacaggtggcatcgcattcaagctgagcggaacgtgaga
gaggcgtcgcttcgccttgatgagctccccgccgccacacaggaagcccctgctgacgga
cacatccacctgcagctgaacagccaattatttgtaggaggcactgcttccaggcagaag
ggatttcgaggatgtatccgctccttgcagctgaacggtgttactctggacctggaggaa
agagcgaaggtcacccccggggtccaggcaggatgcccaggccactgcggcacctacggt
gggctttgtcagaaccaaggccgctgtgtggagggaatcagaagcttttcttgtgactgc
agctcgtctgccttcactggagccttctgtgaccaggacgtctcagtcgccttcgagccg
gaaacatccctcagctacagcttcgaggaaaacctgccgaatgagtcaaacgggagcagc
cgctcccatttgtccccctttctgcccaacctgaacctgagaggagaaaacgtttcgctg
agtttcaggagcgcccagagtcctgctttgttcctttacgtcagctctcgccgcaggcag
tacctggctctgctgctcaacaagcaagaacagctagaggtgaggtacaggctggaaagt
agcagagaagaagaaatcctcaggagcagagtgaggtcccttgctaacggacagctgcat
tctgtttccgtcagcagactggccgactccgtcaccatacaggttgaccaacatagcaaa
gaacatttcaacatgacctctggtgttgaatttagtgacataaggtcactgactcttggt
agagttcacaactctcagggtttggatccggcgctggctcagctcggctctctgggtttc
gccggctgtctgtctgccatcctcttcaactccatcagccctctgaaagccgccctcctc
cgaccgcgcgccggctctgttgttgtcagggggccgctcatccggtccagttgtggcccc
gctgcagccaatccccacgcagcggaaaacacacaccaccagccagaccaatcagggtcg
gtaggaggaggccagccgttagtgaatgccctcagaagtgactcggctctcatcggaggc
ctgatggtggtgatctttgggattgttgctgcattagccatactgatccgacttctgtac
agaagaaaggggacatgccaaaaccaggagctgacaaaaacagaagatagcaacagactg
cagtttaccagccagaccatctcgcagttcggtccgactgagagccagaaagaatatttt
atttag
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