Xiphophorus couchianus (Monterrey platyfish): 114138794
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Entry
114138794 CDS
T05908
Name
(RefSeq) F-box/WD repeat-containing protein 11 isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04114
Oocyte meiosis
xco04120
Ubiquitin mediated proteolysis
xco04218
Cellular senescence
xco04310
Wnt signaling pathway
xco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114138794
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114138794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114138794
03036 Chromosome and associated proteins [BR:
xco03036
]
114138794
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
114138794
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
114138794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF4
WD40_like
Beta-prop_HPS5
Beta-prop_IFT140_1st
F-box
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_VPS8
DUF6188
Motif
Other DBs
NCBI-GeneID:
114138794
NCBI-ProteinID:
XP_027864016
LinkDB
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Position
23:complement(16617481..16635497)
Genome browser
AA seq
562 aa
AA seq
DB search
MEPEMEDKTVELMCSVPRSLWLGCSSVAESLCALRCLQSIPSTRAHNQTTSGMESQTLVD
DLSPKKTTMVKLTNGPVIGSRKRPSEGNYEKEKEHCIALFDQWSEADQVEFVERLISRMC
HYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCAAELVCKEWQRVISE
GMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTSEIPPNSYYHSLYPKIIQDIETIE
ANWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKQTLECLKVLTGHT
GSVLCLQYDERVIVTGSSDSTVRVWEVTTGEVLNTLIHHNEAVLHLRFANGLMVTCSKDR
SIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN
GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA
YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFL
NVSPNGQSEGRSPSRTYTYISR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaagacaaaacggtggaactgatgtgctctgtgcctcgctctctc
tggctgggctgctcctcggtggctgagagtttgtgtgcactcaggtgcctgcagagcatc
ccctccacccgggctcacaaccagaccacgtcagggatggagtcacagaccttagtggac
gacctgtcgccaaagaagactacaatggtgaagcttactaacggtcctgtaatagggtct
cgtaagcgtccatcagaagggaactatgagaaggagaaggaacactgcatcgccttgttt
gaccagtggtcagaggccgaccaagtggagtttgtcgagcggctgatatcccgtatgtgc
cactaccagcacggccacatcaactcctacctcaaacccatgctgcagagggatttcatc
actgcattgccagcccaaggattggatcacattgcagagaacatcctgtcttttctggat
gcacgttcgctttgcgctgcagagctggtatgtaaagagtggcagagggtaatctctgag
ggtatgctgtggaagaagctcattgagcgaatggtccggaccgacccgctttggaaaggc
ctgtctgaaagacaccagtgggagaaatatttgttcaagaaccgcacatcagaaatcccg
cccaactcctactatcactctctttatcctaagatcattcaagacatagagacaattgag
gctaattggcgatgtggcagacacaacttgcaaaggattcagtgtcgttcagaaaacagt
aaaggtgtttattgtctccagtacgatgatgagaagatcatcagtggccttagggacaac
tccatcaagatctgggataaacaaacactggaatgtctgaaggtactgaccggccacaca
ggctcagtattgtgtctccagtatgatgagagagtcatcgtcactgggtcttctgactcg
actgtcagggtttgggaagtcacgacgggtgaggtactcaacacgttgatccatcacaac
gaggctgttcttcacctgcgattcgcaaatggtctcatggtcacctgctccaaggaccgc
tcgattgcagtgtgggacatggcctcgcctactgacatcagcctgcggcgcgtccttgtt
ggacatcgtgctgctgtcaatgtcgttgacttcgatgataaatatattgtgtctgcctca
ggggaccgcaccatcaaggtgtggagcaccagcacctgtgagtttgtgcgcactctaaat
ggtcacaagcgggggattgcctgtttacagtatagagatcgtctggtagtcagcggctca
tctgacaacacaatccggttatgggacatcgagtgcggggcatgtttgcgagtgctggaa
ggtcacgaggagttggtgcgctgcattcgcttcgacaacaaaaggatcgtcagcggagcc
tacgatggcaaaataaaagtgtgggacctgcaggcagcacttgacccacgagcccctgct
agcacattatgtctgcggactctagtggagcactctggccgtgttttccgcctgcagttt
gatgagtttcagatcatcagcagttctcacgacgacaccattctgatctgggatttcctg
aacgtctcacctaatggccagtcagagggacgatctccgtcccgtacctacacgtacatt
tctagatag
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