Xiphophorus couchianus (Monterrey platyfish): 114138817
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Entry
114138817 CDS
T05908
Symbol
cic
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114138817 (cic)
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114138817 (cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
DUF3915
Motif
Other DBs
NCBI-GeneID:
114138817
NCBI-ProteinID:
XP_027864045
LinkDB
All DBs
Position
3:complement(11569204..11615604)
Genome browser
AA seq
2738 aa
AA seq
DB search
MGPLKTNRRRSPPLTRGRGGKKRVGSHPVKEKDSKRVKKETLVRTTQHTPSTPSKRKYTP
TPTEANSNDEPITNSNTTTKEETTEQMKPVVSDTSDGKKPEEKTEKEKTVGTNGNSSPPT
DFVVLPTSAPAPLGIAAPPQATNHSPSLGSVSSRKTATFKARVPKKKYMYEHFANNASVT
NNIPISSPALISNSYSSINSKNSKSVNTLNNIFKHSNNIPNSINKGTNVSINSSTSSITT
SGITSMTSSSNSCAGSQSTYINSINSRSNNCAGTQPSVLTVDSKATETNHFVSVKDKTLR
TSHSKEKDSLTGENELEGAPNSARSSSTDTASEHSSDLDVMEATGPNANIHILAPFQNSH
PKEVSLSEGLAEALAKGMKNQRVLARQRKRKMESDMKTANGKDSCLQSPVFRPGVVRRVS
GGSVEVQLQGEETLVKYPFCGRTMVTPSIEAESAVYFILDAPPPGISPVAVGTRVCVPFG
EEERSPLLYREGVVVQVDPHPGVSFPYQVLLNEDRETLGEKLVGEKEKGKVTGRVVWVSR
QSLRLLIPPWEVSQLDGGKAKERELEREREERERREEMEVEREVCQLSIGMGVLGGGARL
GPGFSHEGAAGVHTSGTVHSPASSSTVSSSVVAVTSHGCESNLSGRERQKQPNTPEEDVE
VSHFNMGNSIGPKANTGTSQYRNIVSKPSSYVPTSTHLSLVRGVGPPHLSTITSPLPTPS
PALLTPEISNTTPNLPLTKTTPTQTPTPTSGVGSSPGSSRSRTPLSLAQQKYKKGDVVCT
PNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMKTKEMEAAGGEKGGGGSSSGTV
TPSDLRGRASSEFEWDETSRESSETSSRGDSRPRLVLPSLLPHELSSRFDLDECEAATML
VSLGSSRSGTPSFSPISNQSPFSPAPSPSPSPLFGFRPATFSPITASPVLQHRRHRQPSG
TVGGGGGGSKPTTLTGAGERERHVSGVQPSFHSNLTFTVPMSPSKRKSDAPPPPPLPSHH
HDYTPKTELELGDLNNSFRVLSPQTPASHSRTHTPTLSQFKGLNTPSSSRPPSSAAASPP
PLLVSATPPSPLSTDGGLRRVVPIPQQTLRDSPVIVRNPEVPLVKFTESPLERGGGRNEA
AIDNTPPKDIALTPLTPQPVTGLQVPVPINAAAATVPNGTVYLRSPAQTLVLVSPTSSSL
PSTDPTATPLQALSVAVSTTVTASVLSSTDSSGERQDNKCTGFGGEVQQPVPCHPSPTAL
LPLILPAESLHPAPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDAPSHPSE
GQHPVNHPQATSLKTDCQGVAALSQEPAEAPPTVEKSPPSRPPPSSDEPLPEKEKGDVER
ERPDSETESDVDDPFLPGVVPEQPLSTSPVKRRTQSLSALPKDGDKSSPGKREKDHIRRP
MNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGAMEKKKYHDLAFQVKEAHFKA
HPDWKWCNKDRKKSSSEGRGVPGNKDIRERSMSESTEPHSVELKGVGPGLVGVSERSAGE
GHVGQLTRPRAFSQSAVHSLERGDRGNTQALAELAQMCVDSGGQFTSHAPAPSQAQRGVS
EDMTSDEERMVICEEEGDDDVIEDPYPSSSIDLKCKERVTDSDSENGSGDEGDRKRVFAP
VICSTASSSSSHHTPHGRSVSLSSFPSSRRYDEGRSGVVGFSDHRRKERSDGETKDTLVN
EGGSSMQASSLSISSAQLVKSTSSAGGPPSSSVGSLGASQALGIGAVRVASTVVTNVMRP
VISTPLPIASKPRDGGPSSSPHPPERKSLTPQQQPQILIGPGGGVGPPAGGGGCYTSSSP
NPVGAGGVVTNLVLGGALPAQSAVQLITPSPHPQPSHQHPLPCTAVSASHSQTNGPLPLL
QPQFLPGSPAPPPGAKAITQVQYILPTLPANTNPKSPPQNLSQPTSIFNLPTVPPTHVSL
ANGKQQGAGLQTGYAPSPAVGVVNPGARVQTQSPVLQGKMFVPMTTVRTAQAPAQQIPIV
TPPLPVQNGAQSGSKIIHLASMPVVQSQQPQGGAVHHASPFPVTVGAAVVAPGSAPSQAV
LLPPAPTRITYVQSTPGVPSTLPLVSTTTGSSPTQQALPVPGSAYVPSPLATLGFTAIAP
PGQTLVQPLIAGQAPLLATAQSPQPSTAAPASGSGGQIVTAIYPPSPSITMATGVVSMAP
VPPSVVYSVSNPSSASPHILPKHTIAPSTVMQLHLPPHPDRQADRHLPPDRSADRQSDRQ
PDRQVDILAHSDRQVERQNISYNSNSSAAPPSGSAASIRPSSPPLQIQAPGSTPKLLHLP
VRLPQKVKATVATIPVGSYDGGGRGKDRERDKEREKEREREREREKEREREAAANSHFSF
EPEPSGHTGSPAAHPSDEPPSSDTPLEGSSTADSSDPRNRESTTTKEGGWKETLPSSPLP
PPSATEPALPPPQTDKDGPTPKKIKARPPPLKKTFDSVDKTGRVLSEVYFEERFAELPEF
RPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSAPDEQASPKRKSRRRSSCSSEPN
TPKSAAKCEGDIFTFDRAATDGEDILAELEFEKVPYSSLRRTLDQRRALVMQLFQEQGFF
PSAQATAAFQTRYSDIFPSKVCLQLKIREVRQKIMQTATPSDASILGPSESAASAPGPSG
SQVGEGAGKGGGDLHDEEVEQGADVSPEELRESQDSSR
NT seq
8217 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgttgaagacaaataggagacgatctccaccattaacaagaggcagaggagga
aaaaaacgagttggttctcatcccgtaaaagagaaagactccaaaagagtcaagaaggag
acgcttgtcagaaccacacagcacacacccagcactccttccaaacgcaaatacaccccg
acgcccacagaagccaactcaaatgacgaaccgatcacaaacagcaatactaccactaag
gaggagactactgagcaaatgaaacctgtggtgtcagacacaagtgatggaaagaagcca
gaggaaaagactgaaaaggaaaaaacagtggggacaaatggaaacagttccccacccact
gattttgtagtattgcctacctctgccccagctccactcggcatagctgcacccccgcaa
gccaccaatcacagtcctagtttgggctcagtttccagtaggaagacggccacattcaaa
gcgcgcgtacccaagaaaaaatacatgtatgagcactttgctaacaatgcaagtgtcaca
aataatattcctatctccagccctgctctcatatctaacagctacagcagtatcaacagt
aaaaacagtaaaagtgtgaatactctcaataatatttttaagcatagtaacaatattcct
aacagcattaataaaggcactaatgtgagcataaatagcagtacttccagtatcactaca
agtggtattaccagtatgactagcagtagtaacagttgtgctggaagccaaagtacttat
ataaatagcattaatagcagaagtaataattgcgcaggtactcagccatcagtgttaaca
gtagacagtaaagctacagaaacaaaccattttgtctcagtgaaggataaaaccctcagg
acatcacattccaaggaaaaagactcactcactggggaaaatgaattggagggtgcccct
aactcggcacgctcttcctctaccgatacagctagtgagcattcttctgacctggatgtg
atggaggcaacaggaccaaatgctaatatccacatccttgctcctttccaaaactcacac
cctaaagaggtcagtctttcagagggactagctgaagctctggctaaaggcatgaaaaac
cagagagttctggctcgccaacgaaaaagaaaaatggagagtgacatgaagactgccaac
ggtaaagattcctgcctccaatctcctgtgtttagaccaggggtggtgcgcagggtaagt
ggaggtagtgttgaagttcagctccaaggagaagaaacccttgttaaataccccttttgt
ggtaggactatggtgacaccctctatagaggctgagagtgctgtctacttcatcttagat
gcacccccacctggcatttcccccgtagctgttgggactcgagtgtgtgtcccatttggt
gaggaggaaaggagtcctctgttgtacagagagggggttgttgttcaggtggacccccac
cctggtgtctcgtttccttaccaggtactcctaaacgaagacagagaaactctgggtgaa
aagttggtgggggagaaagaaaaaggcaaagtaacgggtcgggttgtctgggtgtcccga
cagagcctgagactactcatccctccgtgggaggtctcccagttagacggtggaaaagca
aaggagagagagcttgagagggaaagggaggagagagagcgccgggaggagatggaggta
gagagagaagtttgccagttaagtatcggcatgggggtgctgggaggtggagcacggctg
ggccctggattttcacatgagggcgctgcaggagtgcacacctctggaactgtgcattca
cctgccagttcctccactgtaagctccagtgtagtagccgtcacaagtcatggatgtgaa
agcaacttgtcgggcagagaaagacagaaacagcctaacacaccagaggaagatgtcgag
gtatctcattttaacatgggtaattccattggtccaaaagcaaacactggaacctcccag
tacagaaacattgtctccaagccgagtagttacgttcctacatccactcacctctcattg
gtgaggggtgtagggccacctcatctctctacaataactagtcctctgccaaccccatcc
cctgctttactgacccctgaaataagcaacaccactccaaacctacctctaactaaaacc
actcccacccagacccctactcccacttctggtgtgggctcctctccgggctcctcccgt
tctaggactcctctctcgctggctcagcagaaatacaaaaaaggcgacgtggtgtgcact
cccaatggcatccgtaagaagttcaatgggaagcagtggaggaggttgtgctctagggag
ggctgtatgaaggagtctcagcgtcgaggatactgctctagacacttgtccatgaaaacc
aaagagatggaggcagcagggggggagaaaggagggggaggcagcagctcagggacggtg
accccttcagaccttcgggggagggcaagcagtgagtttgagtgggacgagacctcaaga
gagagcagtgagaccagcagcagaggagactccagacctcgtttggtccttccttccctc
ctcccccatgaactgtcgtcaaggtttgatttagatgagtgcgaggctgccaccatgctt
gtgtcgttaggaagctcccgctctggcactccttccttctcccctatctccaatcagtct
cccttctcccctgccccctctccctcaccctctccactgtttggtttcaggccggccacc
ttctcccctattactgcatccccagtcttacaacaccggcgacaccggcagcccagtggt
acagtgggtggagggggagggggcagtaaaccaacaaccctaacaggagcaggtgaaagg
gagagacatgtttcgggcgtccagccctccttccacagtaacctgacgtttacggtcccc
atgagccccagcaaaagaaaatcagatgcacctcctccaccacctcttccctcacaccac
cacgattacacacccaaaacagagctggagctgggggacctcaacaactctttcagggtg
ctttcgccccaaacaccagcatcacattcccgcacacatacacccaccctctcccagttt
aaaggactgaacacaccttcttccagcaggcccccatcctctgctgctgcctctcctcct
cctctgctggtgtccgcaacccctccctctcccctctccactgacggagggcttcggcga
gtggtccctataccccagcagactttgcgggactcccctgtcattgttcgaaatcctgaa
gtcccattagtgaagttcacagagtctcccttagaaagaggaggaggaagaaacgaggca
gctatagataacaccccacctaaagacattgctttaaccccccttactcctcaacccgtc
acgggcctccaggttcctgtcccaattaatgctgctgcagcaacagtacccaatggtact
gtctacttgcggagcccagcccaaactctagtacttgtttccccgacatcttcctctcta
ccttccactgaccctactgccacccccctccaagccctctcggttgccgtaagcacaaca
gtgacagcttcagttctgagtagcacggacagctccggagaacgacaagacaacaagtgt
accgggtttggtggagaggtccagcagccggttccctgtcacccctctcccacagctctg
ctccctctgatcctaccagcggaaagtctgcaccctgcccctcgaaaggacatcatcatg
ggacgtcctggcacagtgtggaccaatgtagaaccacggtcagttccagtcttcccttgg
cattcattggttcctttcctggcacccacccaatcagatgctccgtctcatcctagtgag
ggtcagcaccctgtcaaccaccctcaagcaaccagtctaaagacagattgtcagggggtg
gcagcgctgtcacaggagcctgcagaggcacctcccactgtagagaaaagtcccccatcc
aggcctcccccttcgtctgatgagcctcttccagagaaggagaagggagatgtggagagg
gaaagacctgacagcgaaaccgagagtgatgtagatgaccccttcctcccaggagttgta
ccagagcagcctctctccacctccccagtaaagcgacgtactcagtctctcagtgcgttg
cccaaagatggagacaagagcagtccaggaaagagggagaaggatcacatccggcgacca
atgaatgcatttatgattttcagtaagcgtcatcgagcgttagtgcaccaacggcaccca
aaccaggacaataggacagtcagcaagattcttggggagtggtggtatgccctgggagct
atggagaaaaagaagtaccatgacttggccttccaggtgaaagaggcccactttaaagca
cacccagactggaagtggtgcaacaaagacaggaagaagtccagctctgaaggtcgtggt
gtcccaggaaacaaggatatcagagaaagaagcatgtccgaatcaacagagccccattct
gtggaactcaagggtgtgggtccaggtctggtgggtgtatcagagaggagcgcaggagag
gggcatgtgggtcagcttacccggcccagagccttttcccagagtgccgtgcacagcctg
gagaggggagacagggggaacactcaagctctggcagagctggcccagatgtgtgtggac
agcggtggccagtttaccagccatgctcctgcaccctctcaggctcaacggggggtcagt
gaggatatgaccagtgatgaagagcgtatggtcatctgtgaagaggaaggagatgatgat
gtcattgaggacccttatcccagcagctccatagacctaaagtgtaaggagcgtgtgacc
gacagcgatagtgagaacggttcaggagatgaaggggatcggaagagagtatttgcgccc
gtcatctgttccactgcatcatcgtcttcctcacaccatacccctcatggcaggagtgtc
tcactgtcctcttttcccagcagcagacgttatgatgagggcagatctggagtggtaggg
ttttcagaccacagaagaaaggaaagaagtgatggagagactaaagacactttagtgaac
gagggaggcagcagtatgcaggcctcttctctctccatctcttctgctcaactggtcaaa
tcaacttcttcagctggagggcctccatcctcatcagtaggttccctaggagcaagccaa
gctctgggcattggtgctgtaagggttgcatctaccgtagtgacgaacgtgatgcgtccg
gttatcagcacaccgctcccaatcgccagcaaacctagagatggcggcccgtcgtcaagc
ccgcatcctccagagaggaagtccctcactccccagcagcagccccaaattctgattggt
ccaggaggaggagttgggcctccagccggagggggtgggtgctacacttcatcatcacca
aaccctgtaggtgcgggtggtgtagtgactaacttagtgttaggaggggctctgcctgct
cagtctgctgtccagctcatcactccctcccctcaccctcagccgtcccatcagcatcct
cttccctgtacagccgtctctgcgtcacacagccaaaccaacggccccctgcccctcctc
cagccccagttcctccctggctcccccgcaccgccccccggggctaaggccatcacacaa
gttcagtacatcctgcccaccctccctgccaacaccaaccccaagagcccaccacagaat
ctcagccagccaaccagtatcttcaacctacccacagttccaccaacacatgtgtccctg
gccaatgggaaacagcagggggccggtctgcaaacaggatacgctcccagccctgcagtg
ggcgtggtcaaccctggagcaagagtgcaaacccagtctccggtgctccagggtaaaatg
tttgttcctatgacaacagttcggactgcgcaagcccctgcccagcagattcccattgtc
actccaccccttcccgtccagaacggtgcacagtccggaagcaagattattcatcttgcc
tccatgccggtggtccagtcccagcagcctcagggtggagcagtgcatcatgccagcccc
ttcccagtaacagtgggagcagcagtggtggcaccaggatctgccccctcccaggcggtg
ctgctgccgcctgcacctacaagaattacctatgtccagtccacaccgggggtcccatcc
actctgcctctagtctccacaacaacaggctcctcacccacccagcaagctctaccagtg
cctggatctgcttatgttccctcacctttagcaacccttgggtttacagccattgcacca
cctggacagacactggttcagccactgattgcaggtcaggcccctctgctcgccacagct
cagtccccacaaccctccaccgccgcccctgcctcaggttccgggggccagatagtcacc
gccatttaccctccatcaccaagcatcaccatggcaacaggggtggtctctatggcgcca
gtgccccccagcgtggtctactctgtctctaacccttcgagcgcttctccccacatcctg
ccgaaacacacgattgccccctccaccgtcatgcagctccatctgccgccccacccggac
cgccaagcggacaggcacttgcccccggaccgatccgccgaccgtcagagcgacaggcag
cccgacaggcaggtggacatcctggcacattcagacagacaggtggagaggcagaacata
agctacaacagtaacagctcggcggcaccccctagtggctcagctgcgtccataaggccc
agcagtcctccacttcagatccaagcacccggcagtacacccaagttactacatcttcca
gtcaggttgccccagaaagtaaaagcaacggtggcaaccattcctgttggcagctatgac
ggaggtggccgagggaaagacagagaacgagacaaagagagggagaaggaaagggagaga
gaacgagagcgagagaaggagagggagagagaagcagcagccaacagtcatttctccttt
gagcctgagccttcagggcacacggggtctccggcagcacatcccagtgatgagccgccg
tcctccgacacacctctggagggttccagcaccgcggactcctctgacccaaggaacagg
gaaagcacaacaaccaaagagggtgggtggaaggagactctcccctcctctcctctcccc
cctccgtcagccacagagcccgctttgcctcctccacagactgacaaagacggacctaca
cccaaaaagatcaaagcccgcccaccaccactaaagaaaaccttcgactctgtcgacaag
actggcagggttctctcagaggtatattttgaggagcggtttgccgagctgccggagttt
cgacccgaggaggttttgccgtcacccaccctgcagagtctggccacgtcacctcgcgcc
atcctgggcagctatcgtcgcaagaggaagaactcaacagatttggactctgcacctgat
gagcaagcctctccaaagaggaagagtcggcggcgttccagctgcagctctgaacccaac
acacctaaaagtgctgccaaatgtgaaggagacatcttcaccttcgacagagcagccaca
gatggagaggacattctggcagaactggagtttgaaaaggtgccgtattcgtccctgcga
cgaactcttgaccagaggagggcgctggtcatgcagctgttccaggagcagggcttcttt
ccgtcagctcaggccactgcagcattccagacaagatactccgacattttcccctccaag
gtgtgtctgcagctgaagatcagggaggtgcggcagaagatcatgcagacagcgacaccc
tctgatgcctccattttaggcccgtcagagtccgctgcatcggctccaggaccatccggc
tcccaggtgggggagggagctggcaaaggaggtggagacctgcatgatgaggaagtggaa
cagggagcagacgtgagtccagaggagcttcgtgagtcacaggactcttctagatga
DBGET
integrated database retrieval system
