Xiphophorus couchianus (Monterrey platyfish): 114138864
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Entry
114138864 CDS
T05908
Symbol
lrrtm2
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 2
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
114138864 (lrrtm2)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
LRR_NXF1-5
Keratin_assoc
Motif
Other DBs
NCBI-GeneID:
114138864
NCBI-ProteinID:
XP_027864100
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Position
23:complement(21318028..21323523)
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AA seq
546 aa
AA seq
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MGFHSRWPLVGPAPVAVSVISMLVACLLSPASCTTCPQKCRCEDLQFYCDTQELKAPPDG
VDKGALGLSLRHNSITELSPDQFYGFSQLTWLHLDHNQITTVQEDAFQGLYKLKDLNLSS
NRITKLPNTTFIHLINLQILDLSFNQMTSLEPELFHGLRKLQILHLRSNLLRTTPVRAFW
DCRNLEYLGLSSNRLRSLARNGFAGLIKLKELHLEHNQLTKINLAHFPRLLALQFLYLQW
NKINNVTCGMEWTWSTLEKLDLTGNEIRVLTPDVFQTLPNLKNLLLDNNKLSSLEPQVLD
MWQSLSTIGLSSNLWECTKRICSLATWLSAFKGRWEHSIVCHSPEYAQGEEILDAVYGFQ
LCQNFSAPVIQTISTTTDTTTAAEITSSLFGIMQPTPTQDYAEDFGSFTTLTTTTTTTQT
PSTAEATTALLEEAAVTDDFLAMDNTVMTHRVIIGTMALLFSFFFIIFVVYISRKCCPPT
LRRIRHCSAIQNRRQMRTQQRQPMADLATQVPYNEYEPSHEEGALVIINGYGQCKCQQLP
YKECEV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggtttccattcaaggtggccattggtgggacctgcaccagtggctgtgagtgtgatc
agtatgctcgtagcgtgtctgctgtctcctgcatcatgcacaacctgccctcaaaaatgc
cgctgtgaggacctgcagttctactgcgacacccaggagcttaaggcaccaccagatggt
gtggacaagggcgccttggggttgtcgctacgccacaacagcatcactgagctctcccct
gatcagttctatggtttcagccagctcacctggctacatctagaccacaaccagatcacc
acggtacaagaggatgcctttcaggggctctataaactgaaggacctcaacctgagctcc
aatcgtatcaccaagttgcccaacacaaccttcatccacctcatcaaccttcagatcctg
gacctttcattcaatcagatgacatcattggagccagaactgtttcatggacttaggaag
ctccagatacttcacctccgctcaaatttacttcgcactacacctgtacgagcgttttgg
gactgccgcaacctggaatatctgggcctgagcagcaaccgtctacggagccttgcccgg
aatggatttgctgggctcattaaactcaaagagctccacttggagcacaatcagctgacc
aagattaacttggcccatttccctcgtctccttgccctccagtttctctatctccagtgg
aataagatcaacaatgtcacgtgtggcatggagtggacctggagcactttagagaagctg
gacctcacaggaaatgaaatccgtgtcctgacacctgacgtgtttcaaacgctgccaaat
ttaaaaaatttgctactggataacaacaaactaagcagcttggagccccaagtcttggat
atgtggcagtctttgagtacaattggactgtccagcaacctttgggaatgtaccaaaagg
atttgctctttggccacatggttgagcgccttcaagggaaggtgggaacattccattgtc
tgccatagtcccgaatatgcccaaggggaggagatacttgacgccgtctatggattccag
ctttgccagaatttttcagcaccagtcattcagaccatcagtacaaccacagacactact
acggctgctgagatcacaagctccttgtttggaattatgcagccaacccccacacaggac
tatgcagaggattttgggagctttaccacactcacaaccaccacaaccacaacacaaaca
ccaagcactgctgaagcaactactgctttgctggaagaggcagctgtaacagatgatttc
ttagctatggacaacactgtcatgactcatagggtcatcattggaactatggcccttctc
ttttctttctttttcataatttttgttgtgtatatctcacgaaagtgctgcccccccacc
ctgcggaggatacgccactgttctgctattcagaaccgcagacagatgaggacccagcag
cgacagccaatggcagacctagccacacaggtaccctataatgagtacgagcccagccat
gaagaaggggctctcgtcatcatcaatggctacgggcagtgcaaatgtcagcaactgcct
tacaaagagtgtgaagtatga
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