Xiphophorus couchianus (Monterrey platyfish): 114138873
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Entry
114138873 CDS
T05908
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114138873 (rlim)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114138873 (rlim)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114138873 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
114138873
NCBI-ProteinID:
XP_027864121
LinkDB
All DBs
Position
23:complement(18543781..18552376)
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AA seq
658 aa
AA seq
DB search
MEGSDSVEQGGGDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGNPGEVT
EDELFNRLQQIKDGPEQPQNNNPSTENTEDPVETPESSEDSQGGDSLLDWLNTVRRTGNT
TRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQGPSEQPPAGQEEE
EVADPEPQVPMETEVVEEPVVEELAVIVEPEPEETPEEEVASQEVVEEPPSPPPPPPPAP
VVAEASPEQPPPCSSPRRGQRRPRSRSPEPRRTRARLARSRSPLRLDQLDGIPGPRHTYG
SQSPSSSTDTPPVPQVEGSSRTRQHILSRQSPAEDNVHPPSVEAESIPEAQNVRPQEGEP
NEGGSAERRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRT
FSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDS
SDSNRGTGTPADTESLTNPDANNADASAADEQPSVAAAAPGARERTVETDVDEGLTTGPQ
ASGGRARLRPPINLEEPSSLPFLRLAHFFLLNDDDDDQPQGLTKEQIDNLSMRNFGESDA
LKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagcgtagagcaaggtggcggtgaccagccagagtcgcagcgccga
aggcagttggatcgtctagaccgggaagaggccttttatcaatttgtcaacaatctcagt
gatgaggactatcgtcttatgagagacaacaacctcttgggcaatccaggggaggtaact
gaggatgagctgttcaatagacttcagcaaatcaaagatggtccagagcagccgcagaat
aacaacccaagcacagaaaatacagaggatcccgttgaaactccagagagctctgaggac
tcccaaggtggggatagcttgctagactggctcaacacagtgagacgaaccggcaacaca
actagaactggacaccgcggaaaccagtcgtggcgagctgtgagccagaccaacccaaac
agtggtgactttcgctttagcttggagatcagtgtgaaccgcaacctggccgaacagcag
gccgctgctgaaggagaacaggggccttcagagcagcctccagcgggccaagaggaagaa
gaggttgcagatcctgaaccacaggttcctatggaaacggaggttgtggaagaaccagtc
gttgaagagttagctgtcattgttgagccagaacctgaagaaacacctgaagaagaggtt
gcgtcacaagaagttgtcgaggaacctcccagtccacccccacctccacctccagctcca
gttgtagcagaagcttcaccggagcaacccccaccttgttcttctccacgaaggggacaa
aggagaccccgcagtcgtagcccagaaccacgcaggaccagagcccgcttagccagaagc
cgctcacctctccgtttggatcagctagatggcatacccggtccgcgacacacctacggc
tctcagagccccagttcttccactgacacacctccagtgcctcaagtggagggcagttct
cggactcgacaacatattctctccaggcaaagcccagcagaagacaatgttcatccaccc
agtgtcgaagcagaatcaatcccggaggcccagaatgtcagacctcaggaaggagaaccc
aatgaaggaggctcggccgagcgccgtcccccgactataatgctcgaccttcaggtgcgt
cgtgtgcgtccaggcgaatatcggcaaagagacagcatcgccagccgcacccggtcacgc
tcgcagaactccaacaacacttttctctatgagagtgagcgagggggttttcgcaggacc
ttctcgcgctccgagcgtgccggagtgaggacctatgtcagcaccattcgaatacccatt
cgtaggatctccgacgcagggttaggagaggcaacgtcgatggctctccaatctatgata
aggcagattatgacgggcttcggcgagctaggctacctcatggattccgactcagattct
tcagattccaaccgcggtaccgggacacccgcagatacggaatccctcaccaatccagat
gctaataacgctgacgcatctgctgctgatgagcaaccatcggttgctgctgctgctcct
ggagccagagagaggacagttgagacagatgtggatgagggtcttactactggcccacag
gcttctggtggaagggctcgacttagaccccccatcaacctagaggagcccagctcactg
cccttcctacgacttgctcacttcttcctcctgaatgacgacgatgatgaccagcctcag
gggctgaccaaagaacagattgataacctctccatgcgcaacttcggtgagagtgacgcc
ttgaaaacctgtagcgtctgtataacggagtacgccgaggggaacaagttacgcaagctt
ccctgctctcatgagtaccacgtgcactgcatagaccgctggctctctgagaactccacc
tgccccatctgtcgcagggctgtcctggtttcagccaaccgagagagcgtgatctaa
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integrated database retrieval system
