Xiphophorus couchianus (Monterrey platyfish): 114138947
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Entry
114138947 CDS
T05908
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114138947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114138947
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114138947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
AdoHcyase_NAD
Motif
Other DBs
NCBI-GeneID:
114138947
NCBI-ProteinID:
XP_027864263
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All DBs
Position
23:23380829..23408771
Genome browser
AA seq
1276 aa
AA seq
DB search
MIAAPEIQPEFAYPQDTDTRFSSDTDFSEDPDGRSGTTAKGKGGKKGKKAAGEKGKGGKG
AGRINGHHQENGMENMMLFEVVKVGRSAMQSVVDEWIESYKHDRDVALLDLINFFIQCSG
CKGVVSGEMFRNMQNSEIIRRMTEEFDEDSGDYPLTIAGPQWKKFKTNFCEFISVLVRQC
QYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQR
QYEAERNKIVAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDSIAEIRA
ICIEEIGVWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYHNRELNARLEL
FTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLNSTDEVLTPEDCESVYHLVYSAHRPVAV
AAGEFLYKKLFSQREPEEEGAPKRRGRQSPNANLIKTTVFFFLESELHEHAAYLVDSLWE
CGAELLKDWECMISLLLDDPMPGEEALTDRQETALIEIMLCTVRQAAECHPPVGRGTGKR
VMTAKEKKTQLDDRTRITELFAVALPPLLAKYAVDAEKVTNLLQLPQYFDLEIYTTGRLE
KHLEALLRQIKEIVEKHTDTEVLESCSKTYHALCNEEFTIFNRVDIARSQLLDELVDKFS
RLLEDFLQEGEDADEDDAYQVLSTLKRITAFHNAHDLSGWDLFTSNFKLLNTGIENGDMP
EQIVIHSLQCTHYVILWQLAKLSEGSSRKDDMVNLRKQMRAFCMMCQRYLTNVNTAVKEQ
AFTILCDLLLIFSHQMVSGGREHLEPLVYSPEDSLQSELLSFILNHVFIDQDDDTNSTDG
QQDDEAVKIEALHKRRNLLAAYCKLIIYCVVEMRTGADIFKQYMRYYNDYGDIIKETMSK
TRQIDKIQCAKTLILSLQQLFNEMLSELGHGFDRSSSSFCGIKELARRFSLTFGLDQVKT
RDAIAMLHKDGIEFAFKEPSPQGEGGPPLNLAFLDILSEFSSKLMRQDKRTVHMYLERFM
TFQMALQREDCWLPLISYRNSLQAGGDDDTMSVMSGYSSRGSSVRSKKVKPPAATAGTSA
AKRKLPEEESSSGDVWQQSIQTPVMLPSPHLTSTAMRDPKRGRDDSYMGGYALPHEQQPP
PHPHPHQQHHPQTPQHHQTPMDYNSQVTWMLAQRQQEEARQQQERAMNYVKLRTNLQHAI
SRRGTGLMEEDEEPIVEDVMMSSEGRMDDLNEDMDFDTMDIDLPPSKNRRERSELKPDYF
DPASIMDESVLGVSMF
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcaccagagatacaaccagagttcgcctaccctcaggacacagataccaga
ttctcctcagacacagacttctctgaggatcctgatggaagaagtggaactacagctaaa
ggaaagggtgggaagaaagggaagaaggcggcaggggagaagggcaaaggtggaaaggga
gcaggccgcataaatggccaccatcaggagaatggcatggaaaacatgatgctgtttgag
gtggtgaaagtgggcaggagtgcaatgcagtctgttgttgatgagtggattgagtcctac
aaacatgacagagatgttgcattgctagatctcatcaattttttcatccagtgctcagga
tgtaaaggcgtggtgagtggtgaaatgtttcgcaatatgcagaactctgagatcattcga
cgaatgacagaggaattcgacgaggacagcggcgactatcctctcaccatagccgggccc
cagtggaagaagttcaaaacaaacttttgtgaattcatttccgtgctagtgcgtcagtgt
caatacagtatcatctatgatgagtacatgatggacacggtcatctccctcctcactgga
ctatcagattcccaagtccgagccttcagacacacctcaacgctggcagctatgaagctg
atgaccgccctggtgaatgtagctctaaacctgagcattaacatggacaacacccagcgc
cagtatgaagcagagaggaataaaatagttgctaaaagagcaaacgacaggctggagctt
ctccttcaaaagcgtaaagagctccaagaaaatcaggacgaaatcgagaacatgatgaat
gcaattttcaaaggagtgttcgttcatcgatatcgagactcgatagcagaaatcagggcc
atctgcatagaggagatcggtgtgtggatgaaactgtacagcgatgccttcctcaacgac
agctatctgaagtacgtgggatggacgatgcatgataagcaaggggaggtacgtctgaag
tgtctgacagctctgcagggcctctaccacaacagagaactcaatgcaagactggagctc
ttcaccagccgctttaaggatcggatcgtctccatgactcttgataaggaatatgatgtt
gcagtacaagcgattaaactgctcacactagtcttaaatagtacggatgaggtcttgacg
cccgaggactgcgagagcgtctaccacctggtctactcggcacacaggccggttgcagtc
gcagctggagaattcctctacaagaaattgttcagtcagcgagaaccagaggaggagggc
gccccgaaaaggagaggccggcaaagccccaatgccaacctcattaagaccactgtcttt
ttcttcctggagagcgagctccatgagcacgcggcttacctggtggactccctctgggaa
tgtggtgcagagctactgaaagactgggagtgtatgatcagcttactgctggacgacccc
atgccaggagaggaagctcttacagatagacaagaaacagctttgattgaaatcatgctg
tgcactgtgcgtcaagctgctgaatgccatccacctgttggaagaggaacaggcaagagg
gtaatgacggcgaaagagaagaaaacccagctggacgatcggacacgaataacagagctc
ttcgccgtggctttgccgcctctacttgccaagtacgctgtcgacgcagagaaggtgact
aacttgttacagctgcctcagtactttgacctggagatttacaccacaggacgtctggag
aagcacctggaggccctgctgcgtcagatcaaggaaatagtggagaagcacacagacact
gaagttttggagtcgtgctccaagacgtaccacgccctctgcaacgaggagttcacaatc
ttcaacagggtagacatcgctcgctcgcagctcctggacgagctggtggacaagttcagc
cggctactggaggactttctacaagagggtgaagatgcggatgaagatgatgcttatcag
gttttgtcgactctaaagaggatcaccgcgtttcacaatgcccacgacctgtcagggtgg
gacctctttacaagcaacttcaagctgctcaacacgggtatagagaatggagacatgcct
gagcagatagtcatccattcgctgcagtgcacccactacgtcattctgtggcagctggct
aagttgtccgagggcagttccagaaaggatgacatggtcaacctcaggaagcagatgagg
gctttctgtatgatgtgccagcgctacctcaccaacgtaaacacggccgtcaaagaacag
gcgttcaccatcctgtgtgatcttctgctcatcttcagccatcagatggtctcgggaggc
agggaacacctggagcctttggtttattcgccagaggactccttacagtcggaactgctg
tctttcatcctgaaccacgtcttcatcgaccaggacgacgacacaaacagcacagatggc
cagcaggacgacgaggcggtaaagatcgaagctctgcacaagaggaggaacctcctggct
gcctattgtaagctcatcatctactgtgtggtagaaatgaggactggagcggacatcttc
aagcagtacatgagatattacaacgattatggtgacatcatcaaggagaccatgagtaag
actcgacaaattgataagatccagtgtgccaagacgttgattcttagtctgcagcagctg
tttaacgaaatgctgtctgaactgggtcacgggttcgaccgctcctcctcctcgttctgc
gggatcaaagagttggcgcgccggttctccctgaccttcggcctcgaccaagtgaaaacc
cgagacgccatcgccatgctccacaaggacggtatagagtttgcgttcaaggagcccagt
cctcagggagagggaggccctcccctcaacttggccttcttagacatcctcagcgagttc
tcctccaagctgatgagacaagacaaaaggactgtccacatgtacctggagcgcttcatg
acgttccagatggctctgcagcgagaggactgctggcttccgctgatctcctacaggaat
tcgctgcaggcgggcggcgacgacgacaccatgtctgtgatgagcggctactccagccgg
ggctcctcggtccgctccaagaaggtgaagcccccggcggcgacagccggaacgtcggcg
gcaaagaggaagctgccggaagaggagagcagcagcggcgatgtctggcagcagagcatt
cagacccccgtcatgttgccttcccctcatctcacctccactgccatgcgggaccccaag
agggggcgggatgacagctacatggggggctacgcgctcccccatgagcagcagccgcca
ccccaccctcacccgcaccaacagcaccatccgcagacgcctcagcaccaccagactcca
atggattacaattcccaggtgacgtggatgctggcccagaggcagcaggaagaggcgcgc
cagcagcaagagagagccatgaactacgtgaagctcaggaccaatctgcagcatgccatc
agtcggcgcggcaccgggctcatggaggaggatgaagagcccatcgtggaggacgtgatg
atgtcatcggaggggcggatggacgacctcaacgaagacatggactttgacaccatggac
atcgatctgccgccgtctaagaaccgccgcgagaggtctgagctcaagccggactacttt
gaccccgcttctatcatggatgaatcggtcctcggggtgtccatgttttaa
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