Xiphophorus couchianus (Monterrey platyfish): 114139022
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Entry
114139022 CDS
T05908
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114139022 (cdh17)
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Major cadherins
114139022 (cdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
Fibulin_C
RibLong
Big_13
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
114139022
NCBI-ProteinID:
XP_027864435
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All DBs
Position
3:16063996..16077507
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AA seq
867 aa
AA seq
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MTPMVHLLLLPFLLSIAAGMDLEELKGPFVDISLDVNEATAVPHPVHQFQVPAGVTSFKM
SGEGLDIFKMSNDGWLYLEKPLDWSEGTHYMFTVEAMGDEDVVAGPVTVTIKVLDVNNNA
PRFNQEVYTAVFRERRKPDVPFVQVSATDQDDPTTPNARLRYSLHSQVPNNNNIFLFQID
PETGEISTSKEGEEMLKAKPGIQFSREEERSIDSLERKFDDYCPGQKIPYEQNPFFSCVA
TQEMKRRNLDPLEDPDYVLLVRVQDLDGATETGLSSIAKVYIIVQPNLWVNPGPLSIEEN
LKGDYPRVIAKVQSNDPDAGYSLVQKERELRFPFQIKENGEILLTEALDREQKDMYILVV
FAKDSNDIEVDPPMEIQVLVKDVNDNEPVCKEEETEMEIQENEPIGSEVGRLVAHDNDQP
ETINSLLTYTIISQDPSSSPNSFSIDQTNGRIQALRLLQRREQNIYNLDVKVSDSELSTI
CKVIIKVIGVNNEEPVFEKNYYGNHSLAEDAEVGTTVLTIKATDTDEPDTGSSYIMFDIS
NGNDGDVFTVETDGKGVGYVVIAKPLDFESRSTFDLQIDARNTEPLRKGVEYTSKSTATL
TVTVNDVDEAPEFMMNFMDVVVPENFTKGSVLLKINAKDPEGKEISFKLDGDDKGWLEIN
PATGEIKTKTKMDRETLETFVVTVTAFEKNNPAQSSEHAVHVRLLDVNDNVPKLTKNDDF
ICMQNIKPLIIEANDGDADPFSGPFDFVLTKKSPNWKLTKRDDSSAQLQLTKKPLKEGTY
SLQITVKDRAGMGIPNTFEVKICNCTTFGYCYTPPHGKSFKPPMGVTIGILVGVLGFCAV
IFIIVVKRSSRNNNNNQPEDGERKPMM
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatggtgcatctgttgttgctcccattcctgctcagcattgctgcagggatg
gacctggaggagctgaagggcccgtttgtggacatttcattagatgtgaacgaggcaacg
gcagtgccccatccggtccatcagtttcaggtccctgcaggtgttactagtttcaagatg
agcggagaaggcttggacatctttaaaatgtccaacgacggctggctttacctggagaaa
cctctcgactggtctgagggcacccactacatgttcaccgtggaggcaatgggagatgag
gatgtagtggctggcccagtaactgtgaccataaaggttttagacgtaaacaacaacgct
ccacggttcaatcaggaggtctacacagctgtgtttcgggagaggagaaaaccggatgtc
cccttcgtccaagtgtctgcaaccgaccaggacgaccccacaactccaaacgctcgtctg
cgctacagcctgcacagccaggtccccaacaacaacaacatcttcctgttccagatcgac
cccgaaaccggagagatctccaccagtaaagagggagaagaaatgctgaaggccaaacca
ggaatccagttttccagggaagaagagaggagcatcgattcactggaacgaaagtttgac
gactactgtccaggacagaagatcccatatgaacaaaatccattcttcagctgcgtagcg
acacaagagatgaagaggcgtaacttggaccctctggaggaccccgactacgtcctgtta
gtccgtgttcaggatctggacggagccacagagacgggtctgagttcaattgccaaagtt
tacattattgtgcagcccaacctgtgggtcaaccctggaccattaagtattgaggagaac
ttaaaaggagattatcctcgtgttattgctaaggtccagtctaatgaccctgatgcgggc
tactcgttagtgcagaaggagcgagaactcaggttccctttccagattaaagaaaatgga
gaaatacttctgacagaggcactggacagagagcagaaagacatgtacattttagttgta
tttgcaaaagactccaatgacattgaggtggacccacccatggagattcaagttctggtg
aaggacgtgaatgacaatgagcctgtgtgtaaagaagaggaaactgaaatggagatccag
gagaatgagccaataggcagcgaagtgggaaggcttgtggcccacgacaacgaccaacca
gaaactataaattctttactaacttacaccatcatctctcaagatccatccagctcacct
aacagcttctctattgaccaaaccaatggaagaatccaggcgttgcgcttgcttcagcgt
agagaacagaatatttacaacttagacgtcaaagtcagcgactcagaattgagcaccatc
tgcaaggtgatcatcaaggttatcggcgtgaacaacgaggagcccgtgtttgagaagaac
tattacggaaaccacagtctggcggaggacgctgaggtgggcaccacggtgctgaccatc
aaagccacagacacagacgagcccgacactggcagctcctacatcatgttcgacatctcc
aacggaaacgacggagacgtcttcactgtggaaactgacggcaaaggagtcggctatgtc
gtcattgcaaagcctctggacttcgagtcccgttccacctttgacctccagatcgatgct
cgtaacacagagccgctgaggaaaggtgtggagtacaccagcaaatccaccgccaccctg
accgtgaccgtcaatgatgtggatgaggccccagagttcatgatgaacttcatggatgtc
gtcgtaccagaaaacttcacaaagggatcagtgctgttgaaaataaacgcaaaagaccca
gaagggaaagagatcagctttaagctggacggcgatgataagggctggctggagatcaat
cctgccactggagagatcaagaccaaaaccaagatggacagagagacactggagaccttt
gttgtcaccgtcacggccttcgagaagaacaatcctgctcagtcctctgagcacgccgtc
cacgtccggctgctggatgtcaacgacaacgttcccaaactaacaaagaacgatgacttc
atctgcatgcagaacatcaaacccctcatcatcgaggctaacgacggtgatgcagacccc
ttctctggtccttttgatttcgtcttgacaaagaaatcccccaactggaagttgacgaaa
cgtgatgattcctccgctcagctgcagttgaccaaaaaacccctgaaggagggaacgtac
tctcttcagatcaccgttaaagacagagcagggatgggcatcccaaacacgtttgaggtg
aaaatatgcaactgtacaaccttcggctactgctacaccccaccacacggaaagagcttc
aaacctccgatgggagtcaccatcgggatcttagtcggcgttctgggattttgtgctgtc
atcttcatcatagtggtaaagcgctcaagtagaaacaacaacaacaatcaaccagaggac
ggggagcggaaacccatgatgtag
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