Xiphophorus couchianus (Monterrey platyfish): 114139135
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Entry
114139135 CDS
T05908
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114139135 (lsm11)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
114139135 (lsm11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
114139135
NCBI-ProteinID:
XP_027864626
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All DBs
Position
23:21952702..21955848
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AA seq
300 aa
AA seq
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MEESERKSARPDSKHSASSGPEADTGDDEANELNVCSEKFDPLLALYSVVAPPLPFPNIK
CFNNVAEYESFLKGGRGRAKPENVEKRRRKAMKGVADPERIERLKKLMVNNPVSEGGDSS
GAAPRTRRRQKPLKNVLTRMPLCQGSPLGELHRCVEERIRVQVHIRTFKGLRGVCSGFVV
VFDKFWNMAMVDVDETYREPLLGEALYHEKALTISRLFEQLSLQETLGGGEPREDHDDDG
AAGPKPSEDVGSKRDKGVVSVKTRDSAAHQKKKYGKVHTRHINQLFIRGENVILVNPQPL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagcgaaagaaaaagtgcgaggccggacagtaaacactctgcatcctcaggg
ccggaggcggacacaggagatgatgaggcaaatgaactaaatgtctgctctgagaagttt
gacccgttgctggccctgtactccgtggtagcgccgccgcttcccttccccaacatcaag
tgcttcaacaatgtggcggagtacgagagcttcttgaagggcggccggggccgagcaaag
ccagagaatgtggagaaaaggcggcggaaagcgatgaaaggggtggccgacccggagcgc
atcgagaggctgaaaaagctgatggtcaacaacccggtgtccgagggaggggacagcagc
ggagcggcaccgcggacgagaaggaggcagaaaccgctgaaaaatgtcctgacgaggatg
cctttgtgtcagggcagtcctctgggggagctgcaccgctgcgtagaggagaggatcaga
gtccaagttcacatcaggacctttaaaggcctgaggggcgtgtgctctggcttcgtcgtc
gtcttcgacaagttctggaacatggccatggtggatgtagatgagacctacagagagcct
ctacttggagaggcgttgtaccacgagaaggcgctcaccatttcacggctttttgagcag
ctaagtctccaggaaaccctggggggcggcgagccaagggaagaccacgacgacgacggg
gcggcgggacccaagccgtcagaggacgtcggaagcaaacgagataaaggcgtcgtctcg
gtgaagacccgggactcagcggcccatcagaagaagaagtacgggaaggtgcatactcgc
cacatcaaccagcttttcatccgcggtgaaaatgtgatcctggtaaacccacagcctctc
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