Xiphophorus couchianus (Monterrey platyfish): 114139180
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Entry
114139180 CDS
T05908
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114139180
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114139180
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
114139180
NCBI-ProteinID:
XP_027864730
UniProt:
A0A3B5MC18
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All DBs
Position
23:7092021..7093893
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AA seq
300 aa
AA seq
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MYNMMETEIKTPLPQSNSGSAPGAKNNSASDQERVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGSNAVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHSMNSPQIQQM
HRYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTTSAMGLSSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSAEHSSLQSSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagatcaagaccccgctcccgcagtccaactcgggctcg
gcgccgggcgcaaagaacaacagcgccagcgaccaggagcgggtgaagcggccgatgaac
gccttcatggtctggtccaggggccagcggaggaagatggctcaagaaaaccccaaaatg
cacaactctgaaataagcaagcggctcggtgctgactggaaacttctgaccgacgccgag
aaaaggccattcattgacgaggccaagcgtctacgggcgatgcacatgaaggagcacccg
gattataaataccggccccgcaggaagaccaagaccttgctcaagaaagacaagtattct
ctgcctgggggactgctggcgccaggatccaacgccgtcaacaactcggtgtcggtgggc
cagaggatggacggttacgcgcacatgaacggctggacaaacagcgcgtactccctgatg
caggaccagctggcctaccctcaacatcacagcatgaacagcccgcagatccagcagatg
caccggtacgagatggccggccttcagtacccgatgatgtcctcggcgcagacctacatg
aacgcggcgtccacctacagcatgtccccggcgtacacgcaacagaccaccagcgccatg
gggctgagctccatggcgtccgtgtgtaagacggagccgagctcgccgccgccggccatc
acgtcccactctcagcgggcgtgcttgggggacctgagggacatgatcagcatgtacctg
cccccgggcggggacagcgcggagcattcctccctgcagagcagccggttacacagcgtc
catccgcactatcagaccgcagggactggagtcaacgggacgctacctctcacccacatc
tga
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