Xiphophorus couchianus (Monterrey platyfish): 114139227
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Entry
114139227 CDS
T05908
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114139227 (aff2)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114139227 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
114139227
NCBI-ProteinID:
XP_027864816
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All DBs
Position
23:complement(26021200..26225542)
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AA seq
1509 aa
AA seq
DB search
MDLFELDFFRDWELEQPCHLESERSALKRREWERRNQEVQQDEDLFSTGFNLFGEPYKTN
KGDALANRVQNTLGSYEEMKDLLTSHSNQSHLVGIPKGSATSNNQQQAAGSSAADRSATE
SQLFNEAWRGAAGGGGGGGAEGSGEKRTGSGALSSASMQPPAVVTSLSNAPAAPHQNVKK
SRNTMEWSKGGQVTGLVVGSGAPGQNGQGQVPAAAAASRGKMGLLEEQQLQRHEELFSSL
KDELGLKEESSPSSSSSSSSSSSSRRHSSKSHSLPDGGNFRSSTVDGCHFKSSSSVENVG
SFKTSPFENETTSHLSLSSSPLASTSVLTTPTPGLTTPTSGLTTPTFPPGCLSGKPIAIQ
QKPTAYVRPMDGQDQAPSDSPQLKPPPVATEGFSSSQSFGGTSGNAKNKLPKLNLSHTGE
VSLPNDSSCVEEILREMTHSWPPPLTAIHTPGKADQTKFPIPNKETQHVTSAYNIQKRCT
VSANKPAAKPSAAPQKSMLEDDLKISSDEEEAEQQVSDNTKARSAALSGASGSSSESESS
SESDTDESESSSSDSDYNQASRTNSPEPEPPSTNKWQLDSWLNKVQAQTKPLVPAQQEHH
GAGSISQDPQTFSPRNEAPGVGTAAKTKPCGSSSTPVSAAPAAEHKDSRTGFCPGREKAK
AKLGQKASGEGQRSKMRLSPGLLSGQEVQAPRRNTTGKKQPHRAERSSSVEENQNQAWSR
TNQHSPAAREKDLLPPLLEHQNPPRLRGKPLSGKTAPRKEPRSATSSATPPAALQQTPAP
LPAVTVNQDKRKHRGPSTKITPKSREFIETDSSSSSSECQSDGEEATKIPSLPAQTTRSA
ISAHMLVNAHNHAPLLPCLGSATGAGSLGTFAGTGLRVKDGVGVVGNGNLLSISNIGASF
GNSVPDPGGSGGQGKDAEPASPPSNSGHDVALSPLREYHEVQSLWVKIDLSFLSRVPGQT
AGERARIRVVDREGNAGRDRERQKLTKGERQEEENEHLVKDKERQGDRERQTDREDRERF
GFGERERTVARDREKISQGMGVLDNPPGQEQGNPRLAGRTERLESGGKHRRLAAANMVAP
TEKHTSKSKRKHKLDHGESSVKCNQKLRLDKDCLLLPPCISPIHNHKSGSADGSLNRKQT
RRRDDKLLPPLLSPLSDEPPRKRACDGGPFLAEEAGAVGMLPCSASSAAASSHRHQRGEG
KATAHARNGGDMDSHCDKPGGDGYHANGHSDAEVWSEAMMDQSEPRRPRLSFTDTVHSAE
YYMQEAKRLKHKADALTDKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSETVEL
IRYAMRLKNFTSHSATVLEKRLAVLCNRCLSLLYLRMFHLKKDHAVKYSRSLMDYFKNSA
KSSHQAPSPWRSNGKVNGTPSPLSLSPSPAGSGGATATGGGGASGSSSSVAIPQRIHHMA
ASHVNITNNILRSYEQWETADRLAADSRDFFQDLDSAMGGALSQQSSMVELVRYIRQGLH
WLRSEAQLL
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggacctctttgaattagactttttcagggactgggagctggagcagccgtgccatctt
gagtcggagcgcagtgctctgaagaggagagagtgggagaggaggaaccaggaggtccag
caagatgaagacttgttctcaaccggatttaacctctttggagaaccgtataaaactaat
aagggcgatgcattggccaaccgagtccagaacaccctgggctcctatgaagaaatgaaa
gacctgctaaccagccactccaaccagagccacttggtgggaatccccaaaggcagcgct
acgagcaacaaccagcagcaagcggcgggctcctccgccgccgacagatcggccacagag
tcccagctgttcaacgaggcctggagaggagcagcaggcggtggaggaggaggaggagca
gagggaagcggggaaaagaggacgggaagcggcgcgctgtcgtcagcctccatgcagccg
cccgccgtcgtcacgtcgttatcgaacgcgccggcggccccgcaccagaacgtgaagaag
tcgaggaacaccatggagtggtcgaagggaggtcaagtgaccggcctggtggtagggtca
ggggcgccgggacaaaacggacaggggcaggtccctgcggccgcggcggccagccggggc
aagatgggtcttttagaggagcagcagctgcaaaggcacgaagagctgttcagctctctc
aaagatgaactgggtctgaaagaggaatcaagcccttcttcctcgtcttcatcctcttcc
tcgtcctcttccagaaggcattcgtccaaaagccattccctaccagatggcggcaacttt
cggtcctccactgtagacggttgccactttaagtcttcctccagcgtggaaaatgtcgga
tctttcaaaacctccccgttcgaaaatgaaacaacttctcacctttccttgtcctcctcc
ccgctggcttccacctctgttctgaccacccccacgcccggtctgaccacccccacgtct
ggtctgaccacgcccactttcccacccggctgcctctcggggaagccgatcgctatccag
cagaagcccacggcgtacgttcgaccaatggacggccaggaccaggcgccgagtgactcc
ccgcagcttaagccccctccggtggcaacagaggggtttagcagcagccaatcttttgga
ggaacgtctggaaacgcgaagaacaagctgccaaaactgaacctcagccacacgggagag
gtcagtctgccaaacgactccagctgcgttgaagagattttgcgggagatgacccattca
tggcctcctccgctcacggccatacacacacccgggaaagccgaccagaccaagttcccc
atcccaaacaaggagacccagcatgtgacctcagcctacaacatccagaagagatgtacg
gtgtcggctaacaaacccgctgctaaaccgtccgccgcaccgcagaagtcgatgctggag
gacgacctgaagatcagcagtgatgaagaagaagctgaacaacaggtgtctgacaacacc
aaagccagaagcgcagcgctgagcggtgcgtcagggagcagcagcgaatcggagagcagc
tccgagtctgacacggacgagtcggaaagcagctccagtgacagcgactacaaccaggct
tcccgtacaaacagtccagagccagagcccccttccactaacaagtggcaactggacagc
tggctgaacaaagtccaggctcagaccaaaccgctggtccctgcacagcaggagcatcat
ggcgcaggctccatcagccaggatccgcaaacattttctcccaggaatgaagcaccagga
gtgggcaccgctgccaagaccaagccctgtgggtccagcagcacacctgtttccgctgct
cccgcggcggagcacaaagacagcaggaccggcttctgcccgggcagggagaaggccaaa
gccaagctgggccagaaggcctcaggggagggtcagaggtcgaagatgaggctgtcgcca
ggcctgttgtcggggcaggaggtccaggccccgaggaggaacaccaccgggaagaagcag
ccgcaccgggccgagaggtccagcagcgtggaggagaaccagaaccaggcatggagccgg
accaaccagcacagccctgcggcgagagagaaggacctgttgccgcctctcctggagcac
cagaacccccccaggctgcgggggaagcctctcagcgggaagacggccccgaggaaagag
cctcgcagcgccaccagctcagccactccaccagcagcgctgcagcagacccccgcacct
cttcctgctgtcactgtgaaccaggataagaggaaacacagaggtcccagcaccaaaatc
acaccgaagtccagggaattcatcgaaacggattcctcctcctcctcgtcggaatgccag
tcggacggcgaggaagccaccaagatcccgtctctgccagcccagacgacgcgctcggcc
atcagcgcccatatgctggtcaacgcgcacaaccacgcgcctctgctcccgtgcctcggc
tctgccacaggggcgggaagtctgggcacgttcgccggaactggactccgagtcaaagac
ggcgtcggcgtagtcggcaacggcaacctgctgagcatcagcaacataggtgcttccttt
gggaactcggttccagatcctggagggtccggagggcaggggaaggatgcggagcccgcg
tcaccgccgtcaaactcgggacacgacgtggctctgtcccctctgagggaatatcacgag
gttcagagtttgtgggtgaaaatcgacttgagcttcctcagcagggtgccggggcagacg
gcgggggaaagagccaggatcagagttgtagaccgggaagggaacgcggggagggacaga
gagaggcagaagctgacgaaaggggagagacaagaagaagaaaatgagcatttagtgaag
gacaaagaaaggcaaggagaccgggagagacagactgacagagaggacagggagaggttt
ggatttggggaaagggagaggactgtggcgagggaccgagagaagattagtcagggcatg
ggggtactagataacccccctgggcaggagcagggtaatcccaggctggctgggaggacg
gagagactggagagcggaggtaaacacagaaggctggcggccgcaaacatggtggctccc
acagaaaaacacaccagcaagagcaagaggaaacacaagttggaccacggagaatcatcg
gtcaagtgtaatcagaagctgcgcctggacaaagactgcctgctcctcccaccatgcatc
tctccaatacacaaccacaagagcggctctgcagacggctctctgaacaggaagcagacc
cggcggcgtgacgacaagctgctgcccccgctgctgtcgccgctgtccgatgagcccccc
cgcaagcgggcctgcgacggcggccccttcctcgccgaggaggccggtgcggtggggatg
ctgccctgctcggcgtcctctgccgccgcctcgtcgcacagacaccaacggggcgaaggg
aaggcgacggcacacgctagaaacggcggggacatggactcccactgcgataaacctggc
ggagatggttaccatgccaacggccactcggacgccgaggtgtggtccgaggcgatgatg
gaccagtccgaaccgcgaaggccgagactgtcgttcaccgacacagtccacagtgcagag
tactacatgcaggaagcaaagaggctgaagcacaaggccgacgctttgacggacaaattt
gggaaagcagtgaactacgcagacggcgccctctccttcatagagtgcgggaacgccatg
gagcgagatccgctggaggccaagtcgccgtacaccatgtactcagagacggtggagctc
atcaggtacgccatgaggttgaagaacttcaccagccactcggccaccgtcttggagaag
agactagctgttctgtgcaaccgctgtctgtctctgctgtatctgaggatgttccacctg
aagaaagaccacgctgtcaagtactcgcgctcgctcatggactacttcaagaattcggcg
aagagttcccatcaggccccgtctccttggaggagcaacggaaaagtcaacgggacgccg
tcgcctctctcactcagcccgtctcctgccggcagcggaggagcaacagcaacaggaggg
ggaggggcatcggggtcgtccagtagcgtggcgatcccccagcggatccaccacatggcc
gccagccacgtcaacatcaccaacaacatcctgaggagctatgagcaatgggagacggcc
gacaggctggccgccgacagcagagacttcttccaggacttggactcggcgatggggggg
gctctgagccagcagagcagcatggtggagctggtgcgctacatcaggcaaggactgcac
tggctgcgctctgaggcgcagctgctctag
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