Xiphophorus couchianus (Monterrey platyfish): 114139258
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Entry
114139258 CDS
T05908
Symbol
nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114139258 (nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114139258 (nhlrc1)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114139258 (nhlrc1)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114139258 (nhlrc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
DUF5711
RING_XB3-XBAT31
DUF6798
Motif
Other DBs
NCBI-GeneID:
114139258
NCBI-ProteinID:
XP_027864874
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All DBs
Position
3:17349173..17351212
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AA seq
399 aa
AA seq
DB search
MDQTSDLPHRSCLSPEATLREIQLNLLECKVCFEMFNSQQRERRPQNLSCGHVLCLECIT
ALSHPLLRKLECPFCRQLCSVDSTSHCQVLSDLQELLLSQKSLSSAPPHRSKGGFISETA
LHLFAAFGGWGTLTNPTGIAVLGSVGGVVVVHDGEKRVVVFNQQGRKLHSFGEKGTGNGD
ICYPVDVAVSPTGYVIVTDAGDKSVKVFTSRGIHVVTVKDCFQLPWGVDTDCCGRILVSD
LQAGNLLRIKVNFSHGIILESQNVLANLCCPKAVAHCQKNGNTAVLEHPRGRHHNRNLKV
FTKDFHLLYQMDSFSLILQTSFRFNISDVAFSSDGDVVVSDCDQGLICSLGNLQNHPVLT
PLVGVHLIRPAGLVILNNTLITVDGGDHTVKIYSSKPGA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaccagacctctgatctcccacatcgttcctgcctgagtccagaggcgaccctgagg
gaaatccagctcaacttactggagtgtaaagtctgctttgagatgtttaactctcaacag
agggagcgcagaccacagaacctttcctgtggtcatgtactctgtctggaatgcatcaca
gctttgtcccaccctctcctgaggaagctggagtgcccgttctgtcgacagctgtgcagt
gttgacagcacctcccattgccaggttctcagtgacctgcaggagctccttttgtcccag
aaatccttgtcctccgctccccctcacaggtccaaaggaggatttatctcggaaacagct
ctgcatctttttgctgcgtttgggggctggggtactctcaccaaccccactggaatcgca
gttttgggctctgtggggggagtagtcgtggtgcatgatggagagaagagagtagtggtg
tttaaccaacaagggaggaagctgcacagttttggagaaaaaggaacaggtaatggggac
atctgttacccagtggatgtggcagtgagtcctactggttatgtcatagtgacagatgca
ggggataaatctgtgaaggttttcacatccaggggaatacacgtagtgacggtcaaagat
tgcttccaacttccttggggcgtggacacagactgttgtgggcgcatcctggtttctgac
ctccaggctggtaatctgctcagaattaaagtgaactttagtcatggcattatcctggag
agtcaaaatgtcctagccaacctttgttgtcccaaagcggtggctcactgccaaaaaaac
ggaaacacagcagtgttggagcatccaagaggaaggcaccacaacagaaatttgaaggtg
tttacgaaagacttccaccttctttaccagatggacagcttcagcctgatcctccaaacg
tccttcaggttcaacatatcagatgtggctttcagcagtgatggagatgtggttgtgtct
gactgtgatcaggggttgatttgtagtttaggaaaccttcagaaccacccagtcctgact
cctcttgtcggggtccatctcattcgacctgctgggttggtaatactgaacaacacgctc
atcacagtggatggtggcgaccatacggtgaagatttattctagtaaacccggtgcttga
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