Xiphophorus couchianus (Monterrey platyfish): 114139384
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Entry
114139384 CDS
T05908
Name
(RefSeq) protein transport protein Sec24B-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114139384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114139384
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
114139384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
114139384
NCBI-ProteinID:
XP_027865114
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All DBs
Position
23:complement(4835387..4860817)
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AA seq
1211 aa
AA seq
DB search
MSASGFTNLDSSAGFNQNPTPNGGAAPPCQNGPLPTHPSMYPPAGYYGVPPPQQSYLSIP
SHATSAPSKASIASSAHSQNYYQNNHQQQQQQTQLPQHQVALSPYSAPPPSQPYATLPSL
APPPSNAQFNQQAFQQQQALYTTSRPYYGQQSYRASPAQPRHHHHHHQQQQQHHPSLVSS
PAGIPVYPNVSYPSGPASSQYVPHTSSNTSTAGVMSTQMGAPLHQFSALPPASTAVQPGY
GTGHQTAATVNGKGSTAAVQNNIHQHYDQSNQAPHNYNSYSGVTQSSGGADGDRPPSGTP
STSVHSSPSRHQGLQYGYVANSGASSASATTSGAAAAPSSSSTDDDDEEEDEDEEAGGDT
SSSSTGSASPVPNNYDSLEGGSYPDSMPPSNNMTNQAPPFGSFGYHGMQTAYQHGPASRP
DASPSHSVYSQPGYQQYSQPFPNLSQLSAALGGLSGVPELEMETLRPVNLLQERNLLPSR
PLEAPEPNLSPDLKKVNCSPQTFRCTLTSIPQTQALLNKARLPLGLLLHPFRDLQQLPVI
TSNTIVRCRSCRTYINPFVTFLDQRRWKCNLCYRVNDVPDEFMYNPVTRSYGEPHKRPEV
QNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNALEAGYLKYFCESLLENLDKLPGDARTK
VGFLTFDNTVHFYNLQEGLSQPQMLVVSDIDDVFIPSHDSLMVNLKESKELVKELLTSLP
AMFSQSRETHSALGPALQAAFKLMSPTGGRVTLFQTQLPTLGAGKLQSREDPNQRSSTKG
AQHLGPATDFYKKLALDCSGQQIGVDLFLLSSQYADLSSLACVSKYSAGSVFYYPSFHCI
HNPAQLEKFQRDLDRYLTRKVGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLANVNPD
SAFAVQMSIEDSLADSSLACFQAALLYTSSKGKRRIRVHTLCLPVVSQLSDVYAGADVQA
ITCLLANMAIDRSISSSLSDARDALVNAVVDFVSAYKSSVSNLQQSGVVVPAAMRLFPLY
ILALLKQKALRTGTSTRLDERIFAMCEFKTQPLPQLMRMLHPDLYRVDNMSDQGALHLND
TVVPQPHLLHLSAERLSRDGAFLMDCGNVLYLWISKCCNETFICDVLGCSSYASIPPNMS
HIPELQTPLSERVRAFLDWLQDNRAFSSPIHIVKDDASAKATLFQHLVEDRSESASSYHE
FLQHIQQQMSK
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtcggggttcacaaacctcgacagttctgcgggattcaaccagaacccaacg
ccgaacggtggagctgcgcccccctgtcagaacggtccactaccaacccacccatccatg
taccctcctgcaggttactatggtgtcccgcctccacaacagagctacctctccatcccc
agccatgccacttccgctcccagcaaagcatcaatcgcaagcagtgcccacagtcagaac
tactaccaaaacaaccaccaacagcagcagcagcaaacacaactccctcagcatcaagta
gcactgtctccatactctgctccacctccctctcagccatatgccaccctcccatcttta
gcacctccaccttcaaatgcccagttcaaccaacaggctttccagcagcagcaagcactc
tacaccacttccaggccctactatggtcaacaatcatacagagcgtctccagcacagccc
cgccatcatcatcatcaccatcagcagcagcagcagcatcatcctagtttggtttcatcg
ccagctggcattcctgtctacccaaatgtttcatacccatctggcccagcgagcagccag
tatgttccccacacttcctccaacacctccacagctggagtcatgtccacccagatgggc
gcgcccttgcatcagttcagcgccctgcctccagcctcgacggctgtgcagccggggtac
ggcacggggcatcaaacggcagcgacagtgaatggcaaaggaagcacagctgcagtccaa
aacaacatccaccaacactatgaccaaagcaatcaggcccctcacaactacaactcctac
agtggggtgacacaaagcagcggaggtgcggatggagaccgcccgccctcaggaaccccc
tccacttcagtccattcctccccaagccgccaccaaggcctgcagtacggatatgttgct
aatagtggagctagctcagcctctgccaccacctcaggcgcagctgcagccccctcgtca
tccagcactgatgatgatgatgaggaggaggatgaggatgaggaagcaggcggcgacact
tcctcctccagtaccggcagcgcctctccagttcccaacaactatgattccctcgaaggc
ggcagctatccagattccatgccgccctccaacaacatgaccaatcaggctccgcccttt
ggtagctttggttaccatggcatgcagacggcctatcagcacggaccggcttcccgccct
gatgcttccccgtcccacagcgtgtacagtcagccgggttaccagcagtactcccagcct
ttccccaacctgtcccagctctctgcagctctgggtgggttgagcggcgtcccagagctg
gagatggagaccctgaggccggtcaacctgctgcaggagaggaacctgctcccttccagg
cccttggaggctcctgagccgaacctcagccccgatctgaagaaggtcaactgcagccca
caaacattcaggtgcaccttgacgagcatccctcaaacccaggcgctactcaacaaggcc
cgcctccctctgggcctcctccttcaccccttcagagatttacagcagctaccagtgatc
acatccaacacaatagtgcggtgtcgctcgtgtcggacgtacatcaacccgttcgtcacc
ttcctggaccagcgcaggtggaagtgtaacctctgttatcgagtcaacgatgttccagat
gagtttatgtacaacccggtaacgaggtcatatggagagcctcacaagagaccagaggtc
caaaactcaacggtagagttcatcgcttcctcagactatatgctgcgacccccacagccg
gcagtctacctgtttgtgctcgacgtgtctcacaatgccttggaggcaggatacctgaag
tacttctgtgaatcacttctggagaacctggacaagttgcccggagacgcgcgcaccaag
gtgggtttccttacctttgacaacaccgtccatttttacaacctccaggagggactgtct
cagccacagatgctggtggtgtcagacatcgacgatgtttttataccgtcacatgacagt
ctgatggtgaacctaaaggagagtaaagagcttgtgaaggagctgttgacgtcgctgccg
gccatgttcagccagagcagagagacgcacagtgctctcggtcccgccttacaggccgcc
ttcaagctcatgtcgccgaccggcggtcgcgtcacgctgttccagactcaacttccgact
ctgggagcagggaagctgcagtcaagagaggatccgaaccagcgttccagcaccaaggga
gcacagcacctgggtcctgccacagatttctataagaagcttgcgctggactgctcaggg
cagcagattggagtggatctgttcctgctcagctcacagtacgccgacctttcatcactg
gcttgtgtctccaagtactcggcgggcagcgtcttttactacccctcctttcattgcatc
cacaacccggcgcagctggagaagtttcaaagggaccttgatcgctacctcaccaggaag
gtcggcttcgaggccgtcatgagaatacgatgcactaaaggtttatccatccacacgttc
cacggtaacttctttgtgcgctccaccgacctgctgtccctggctaatgtgaacccagac
tctgccttcgctgtccagatgtccatcgaagactctcttgctgattcgtctctggcctgt
tttcaggctgctctgctctacacgtccagtaaagggaaaaggcggatcagagtccacact
ctgtgtctgccagtggtcagtcagctgagcgatgtttacgccggagctgatgttcaggct
atcacatgtctgctagccaacatggccatcgatcgatcgatatcttccagcctgtcagat
gctcgtgatgctctggtgaacgccgttgtggactttgtgagcgcctacaaaagcagcgtg
tcgaacctgcagcagtctggggtcgtcgtccctgcagccatgcgacttttccccctctac
atcctggctcttctcaaacagaaagcgctgcggacaggaacgagcacgcgactcgatgag
cgcatcttcgccatgtgtgagttcaagacgcagccgctgccacagctgatgcggatgctt
catcctgacctgtaccgggtggacaacatgtctgaccagggggcgctccatctgaatgat
actgtagttcctcagcctcacctgctgcatctttctgctgagaggctcagcagagatgga
gcgttcctcatggactgtggcaacgttttgtatctctggatcagcaaatgctgcaacgaa
acgtttatctgtgatgttctgggctgctccagctacgcttcaattccccccaacatgagt
cacattccagagctgcagactcctctgtcggaaagagtccgagcgtttctcgactggctg
caggacaacagagcgttcagctctccgatccacatcgtcaaagacgacgcgtcagcgaag
gccaccttgttccagcacctggtggaggaccggtctgagtcggcgtcatcctaccacgag
tttctgcagcacattcagcaacaaatgtccaagtag
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