Xiphophorus couchianus (Monterrey platyfish): 114139401
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Entry
114139401 CDS
T05908
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A
KO
K17906
autophagy-related protein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04136
Autophagy - other
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114139401 (atg2a)
04136 Autophagy - other
114139401 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114139401 (atg2a)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114139401 (atg2a)
Membrane trafficking [BR:
xco04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
114139401 (atg2a)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114139401 (atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
114139401
NCBI-ProteinID:
XP_027865134
LinkDB
All DBs
Position
23:complement(13231470..13257438)
Genome browser
AA seq
2009 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLQERLSLDQLSLDLYNGSGDITNINLDVWAVN
ELLESLGAPLEMVDGFVGSIQVTIPWQALLTDHCTLEVSGLQITCRPKYRTSGNWESQGW
SSSMTSSMQLAQECLKDPPEASEEPPAPLEGLEMFAQTIETVLRRIKVTFIDTIVRIEHQ
PLDLKTGVALEVHIQRLEYFDEAVKDPSSQTAVPVDIHQPPAFLHKILQLTEVQLLYDII
GAVQGPFGEGHLNSATASEGEEEDEERAEEAKPLKSTACPPSQPLLIGRCSGSIETTVKI
KQNDMLPGPKLELDGRGGCVHMLLSPDQITHLADLLAALCIDIEPEKKCGGVNSRPLDSE
DLRLIEEDLSKQLGSSPKDREWENEPHLEPYVTSLENGEMFYSMGPAGMSSSVASTRSGS
ELSDSDMESSTHSLSSLTHPAALTAQGLASCPRRYPVAGCLSSLPHISRTRGRSHSGQAE
QLKPEALLRLTLGGLTLTMLQEDPPSDGASSLAQVSQLFFRGLLSFKENMLANKNFNHLR
KCLAAACPLSNLRLTGAAVQVTCETRSGRRHCRAVTSDLSFSRLELLECLWQDGKPQYCE
LLQFQKAGLFTVGAAARPCAQLHYSLTEKHLRKGKQRVLRRDSVIRVELAELSAELDLGI
LSRLESLSRAFSHCPSQNCGPGLIQTQSVELCSSFTLLSPNAVLRLRFPIPDLRPPPLRR
PPSQRAVREETLVLELTELELKHQEAPDLQSQQPAPGQQWGPCLTQLLEASFTDMHGLYE
GWEGGSFPCIRVKKNHDSMPRISVRVRGGEAQGPAAGLSGMNLGLMKDLGATFFESHCEF
NEKSSSPFSSNRTMFETEEMVIPADPQEMLQFQEQCVAQCQCAVDISFPLAYILLPSKQA
FQSIYNRINNDLLMWEPPPPPLPLAPGPDQSRRPYDEFQLCKSAFKLDSDSEEDEPQFYL
ANDSSGRMQQSVPLPSHNLSLLSLTVIIGKGRLQARTDRKEDETQGELVLDLEGGKIFSV
AQHQNDPNLNFLTLESKRVELYHRAVVKDTSIPERLEMPSFTPPTQLDPTIYPTELGVSS
VRGREEEPQMLSTAIKITLDLQRNVKEFLVALQLQGATMRHYMTQSNQSWHEQLIDFLDV
VDDPILGYTAPAVITILHTHLASCAVDYRPLYLPLRVLFTAESFSLSSNIIVDTATFHLR
FILDDSALYLSDKCETDTVDLRKDYVCVLDIDLLELAITTWKGSDSGKLSQPLFELRCSN
NVVHLYTCADSCAALVNLLQYLVAQGDLHPPPRHTSPTEIAGQKLPLSESPASLPPCPPA
ETAEINQYDLADALIDTERSHRDSLEPESPSVPRGSPVSVYLFPGEGSKQNPSVLQREES
ELDGLVATAMEAQPDMILDDGSEGSTDNDDFCILEAPGMGIPPRDGEPVVTVLCEGPIKV
KDSHFSRPRGSSDLLRAPSGFPVPHTRVVLKEISVVWHLYGGKDFGGKPMSIHAQNSNRG
RSVPVGVRGSPSRSVASARPQNSWRWAGGSGRQHSLLMEIQLTKVSFQHESYPVAVAGQD
GDGSLTSGVGPSGEQPLSRQVFIVQELEVRDRLASSQLNKFLYLYTSESMPRRAHSNMLT
VKALQVLPESGLGGPECCLRVSLLPLRLNIDQDALFFLKDFFSNLASAVNPYMPVDPAAE
VTVKVDPSQKGSEEAGPDGGLGPDLTASVETTYSEQSSSSAGSSSSSSEQPIYFREFRFT
SEVPIWLDYHGKHVVIEQGTFAGILIGLAQLNCSELKLKRLCCRHGLLGVDKVIQYAVTE
WLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWLPIEQYRKDGRIIRGLQRGAASFGT
STASAALELSNRLVQAIQATAETVYDILSPTPPLNRFAITEGRAPTSRPRRAAQPADLRE
GVAKAYDTVREGVIDTAQTLCDVASRGHEQKGLPGAVGGVLRQIPPTVVRPLIVASEATS
NLLGGMRNQIKPDARKEDFLKWRTEDAQE
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctggcttttcccctggtcgggctcaatcaagaagcgggcctgtcggtacctt
ttgcagcactacctcggtcactttctgcaggagcggctgagcctggaccagctcagtttg
gacctgtacaacggcagcggtgacatcacgaacatcaacctcgatgtgtgggcggtcaat
gagctcctggagtctctcggggctcccctggagatggtggatggctttgtgggaagcata
caggtgaccatcccctggcaggctctcctgactgatcattgcaccttagaagtttctggt
cttcagattacatgtcgacccaagtaccgaaccagcggaaactgggagtcacagggatgg
tcgtccagcatgacctccagcatgcagctggctcaggaatgcctaaaggaccctccagag
gcgtccgaggagccgcctgccccactggagggacttgagatgtttgcacaaactattgag
acagttctccgccgcatcaaagtcacatttatagacaccatcgtccgcattgagcaccag
cccctggacctgaaaacaggtgttgccttagaagtgcacatacaacgcctggagtacttt
gatgaagccgtgaaagatccatccagccagactgccgtgcctgtcgacatccaccagccg
cccgcctttctgcacaagatcctccagctgacagaggttcagctgttgtacgacatcatc
ggtgctgttcagggtccttttggggaggggcatcttaactcagccacagccagtgaagga
gaggaggaggatgaggagagagcagaagaagccaaacccttgaaaagcaccgcctgcccc
ccgtctcagccgctgctcatagggcgatgctctggctctattgaaactacagtgaagatc
aagcagaacgacatgctgcctggacctaagttggagttggacgggaggggaggatgtgtc
cacatgctgctgtctccggatcaaattacccatctagcagaccttctggcagccctgtgc
atcgacattgagccggagaagaagtgtggtggagtgaacagtcgcccgttagactcagag
gacctgcgactgatcgaggaggatcttagcaagcagctgggatccagtcctaaagacagg
gagtgggagaacgagccccacctggagccctacgtcaccagcctggagaacggagaaatg
ttttactccatgggccctgcagggatgagcagcagtgttgcgtccactcgctctggcagc
gagctgtcggacagcgacatggagtcctccacacacagcctgagcagcctgacgcacccg
gcagctctgacagcacagggcttggcaagctgtcctagaagatatcctgtagcaggatgc
ttatccagcctgccacatatcagcaggaccagagggcgctcacacagtggccaggcagag
cagctgaaacccgaagccttgctgcgcctgaccctcggtgggctcactctgaccatgctg
caggaggacccgccctctgatggagcctcgtcattagctcaggtgtctcagttgttcttc
cgagggctgctttcattcaaggagaacatgttggccaataaaaacttcaaccatctgaga
aaatgcctcgccgcagcctgtccactctccaatctcaggttgacgggggcagcagtgcag
gtgacatgtgagacgcgcagcgggagacgccactgtcgggccgtgacttcagacctttct
ttcagcagactggaactgttggagtgcctctggcaggatggaaaacctcagtactgcgag
ttacttcagttccagaaagctggactgtttacagtcggagctgcagccagaccatgcgcc
cagctacactacagcctcactgaaaaacacctacgaaaaggtaagcagcgtgtgttgcgg
cgggacagcgtgatacgggtagagcttgcggagctgagcgccgagctggacctgggcatc
ctcagccgcctggagagcctcagcagagccttcagccactgtccgagccagaactgtgga
ccaggactcatacagacccagagcgtcgaactttgctcgtccttcaccctcctgtccccc
aacgccgtgctcagacttcgcttccccatcccagacctgcggcctcccccgctgcgtcgg
ccaccatcccagagggcagtgagggaggagacattggtgctggagctgacagagctggag
ctgaagcaccaggaggccccggacctgcagagccagcagccggcccctgggcaacagtgg
ggcccctgtctcacccagctgttggaggcctctttcacagacatgcatggattgtatgag
ggctgggagggaggctccttcccctgcatcagagtgaagaaaaaccacgactctatgcca
aggatatcggtgcgtgtgcgaggcggtgaggctcagggcccagcagcgggtctgagtggg
atgaatctgggcctcatgaaggatcttggggccaccttcttcgaaagccactgtgaattc
aatgagaaatccagctcgccattttcttctaaccgcaccatgtttgagacggaggagatg
gtgattccggctgacccgcaggaaatgctccagtttcaagaacagtgtgtggctcagtgt
cagtgcgcggtggacatcagcttcccgctggcgtacatcctcctgcccagcaaacaggct
ttccagagcatctacaacaggatcaataatgacctgttgatgtgggagccgcctccccct
cctcttcccttggccccgggtcccgaccagagccgccgtccctacgacgagttccagctg
tgcaagtcggccttcaaactggactctgactctgaagaggatgagcctcagttttacttg
gccaacgattcatctggaaggatgcagcagtcagttcctcttcccagccacaacctcagc
ctcctctccctcactgtgattattgggaaaggtcgcctgcaagccagaactgacaggaag
gaggatgaaactcagggagagcttgtgcttgacctggaaggggggaagattttcagcgtg
gcgcagcatcaaaatgatcccaacctcaatttcctgacgctggaaagcaaacgagtggag
ctctaccaccgagctgtggttaaagacacctccatcccagagaggttagagatgcctagc
ttcacaccacccacacagttggaccccaccatctaccccacagagctgggagtgagcagc
gtacgaggacgggaagaggagccacagatgttgtctacagccatcaaaatcacgctggac
ctgcagaggaacgtcaaggagttcctggtcgctcttcagctgcaaggtgccaccatgagg
cattacatgacgcagagcaaccagagctggcacgagcagctgattgacttcctggacgtt
gtcgatgaccccatcttgggctacacggcaccggctgtcatcaccatcctccacacacac
ctcgcttcctgtgctgtggactacaggcctctgtatctgcccctgagagtcctgttcaca
gcagagtcattttctctgtccagtaacatcattgtagacaccgccaccttccacctcaga
ttcatcctggatgattctgctctctacctctctgacaaatgtgagactgacacagtggac
ttgaggaaagattacgtgtgtgttctggacattgacctgctggagctcgccatcaccaca
tggaaaggcagcgattctgggaagctgtcgcagcctctctttgagctgcgctgctccaac
aatgtggtacacctctacacctgcgcagactcctgcgccgccctggtcaatctgttgcag
tatctggtcgcccagggggacttgcaccccccgccacgacacacctcgcctactgaaata
gctggtcagaaattaccgctgtcagaaagtcctgcgtctctgccgccttgtcctccagct
gagaccgcagagatcaaccagtacgacctggctgatgccttaatcgacacagagaggagc
cacagagacagtttagagccagagtctccttccgtgccaaggggctctcccgtctctgtc
tatttgtttcctggcgaaggttcgaagcagaacccgtccgttctgcagagggaggagtct
gagctcgatgggttggttgccacggcgatggaggcacagcctgatatgatactagatgat
ggctccgagggctccaccgacaacgatgacttctgcatcctggaggcgcctggcatgggc
atacctcccagagacggagagcccgtggtgaccgtgctgtgcgaagggcccatcaaggtg
aaggacagccacttttccaggcctcgaggaagctccgacctgctgcgagctccgagcgga
ttcccggtgccgcacaccagggtggtgctgaaggaaatctctgtggtgtggcatctctac
ggcggcaaggacttcggtggcaagccgatgtccatacatgctcagaactcaaacaggggt
cgctctgtccctgtgggtgttcgtggttctccgtctcgctccgtcgcctctgcccgtcct
cagaactcctggcgctgggctggaggcagcggccgtcagcactcactgctgatggagatc
caactcaccaaggtgtccttccagcatgagtcctacccagtggcagtagcaggccaggac
ggggacgggtcgctgacctctggggtcggccccagcggggagcagcctctgtcccggcag
gtcttcatcgtgcaagagctggaggttcgggaccgcctggcctcttcacaactcaacaag
ttcctctacctctacaccagcgagagcatgcctcgccgagcccactccaacatgctgact
gtgaaggccctgcaggttttaccagagtcgggactcggaggacccgaatgttgcctaagg
gtcagcctgctgccgctgcgactcaacatcgaccaggatgctctgttttttctgaaggac
ttttttagtaatctagcatccgctgttaacccctacatgcctgtggatcctgctgctgaa
gtcacagtgaaggtggatccttcccagaaaggctctgaggaggccggaccagacggcggt
ctcggtcctgacctcacagcctccgtggaaaccacctacagcgagcagagctcctcctct
gccggctcctcctcttcctcatctgagcagccaatctacttccgggaatttcgtttcacc
tctgaagtgcctatctggctcgactatcacgggaagcatgtggtcattgagcaggggacg
tttgcagggattctgatcggtctggctcagctgaactgctctgagctgaagctgaagcgg
ctctgctgcagacacggtctactcggtgtggacaaagtgatccagtacgccgtcacagag
tggctgacggacatcaggaagaatcagctgccgggcattctgggaggcgtcggccccatg
cactcagtagttcagctcttccacggagtgagggatctcttctggttgcccatagagcag
tacaggaaagacgggcgcattattcgaggtctccagcggggggcagcatcgttcggtacc
tctacagcatcagctgccctggagcttagcaacaggctggtgcaggccatccaggctaca
gcggaaacggtgtatgacatcttgtctccaacgcctccactgaatcggtttgccatcacc
gagggtcgggcccccacaagtcggccccgcagagccgcgcagccggcggatctcagagaa
ggagtagccaaagcttacgacaccgtcagagagggagtgatcgacacggctcagaccttg
tgtgatgtggcgtccagaggccacgagcagaaaggtctccctggcgcagtgggcggcgtc
ctgcgtcagataccgcccacagtagtccgacccctgatagtggcttccgaggcgacctcc
aacctgctgggaggcatgcggaaccagatcaaacccgacgctcgcaaagaggacttcctc
aagtggcgcacggaggacgcacaagaatga
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