Xiphophorus couchianus (Monterrey platyfish): 114139536
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Entry
114139536 CDS
T05908
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xco03016
]
114139536 (elp1)
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
114139536 (elp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
TPR_GEMI5
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
114139536
NCBI-ProteinID:
XP_027865326
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Position
23:complement(5167600..5183590)
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AA seq
1315 aa
AA seq
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MRNLKLLKSLCSSELQGPGSPQCFSVRSDTGSLLIASQFSVTEYDPHTGEVVRETSLTAD
GYLPEDGSGVVVGLQDLAELQSACLATAGGDVVLFNLNTSQLECVGSVDSGLTSMSWSPD
EELVILTTGQETIIMMTKDFEPVTEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAQ
KKIQDVQPAVAWDDRRPRVTWRGDGQLFAVSAICPQTGARKVRVWNREGVLQATSEPING
LEQALCWKPSGSLIASSQRHPNKHSVVFMEKNGLLHGDFTLPFSKDQAKVKELVWNSDST
VLAVWLEDLTAGEDGKVKSYIQLWTVGNYHWYLKQSLDFDGDPQKAPVCFCWDPERPLRL
HVVTHSWTSIAYDWGWTTERSRGLDVTDDASVAVIDGEKVLVTTFRQSVVPPPMCSFELQ
LKSPVNQVTFLCQTERTNQIAVFTSNGQISVFGKVSKEDLDKTADGFSILSRPLVLQKSF
RLTAPQDNPLALRQLLWLQEELFFVVTSGVVPNTSTLLMLRPAQDASDTLAVRSQVEVEG
VVISTVHCSQTGTVALQLEDGQIRKLLWDCPEMSVEEWRDSSGCSINFPVSCIQTALCCI
SGTEYLLGLTDRSHLYAGDTELASNVSSFAVCDDFLLITTHSHTCRCLQLSTLTLKGLQV
ALSSDGGQNDETHRRVERGSRIVTVVPQDTRVILQMPRGNLETIHHRALVLAQLRKWLDG
FRFREAFECMRKLRINLNLIYDHNPKVFLENVETFITQLNSINHINLFLTELKEEDTTCT
MYPRPESSPLQSQVVSGQKKVDVVCDALRKAMEAMDANKFCLSILTSHVKKTVPELEIAL
QKVHELREKPPEAPGAVSAEEALKYLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQKDPK
EYLPFLNMLKSLEPNYQRYTIDKHLKRYRKALVHLSKSGEEHFIEVLQLVKEQKLYSEAL
RLYTADSPQYKLVSSAYAEHLVEQQQAEQAGLLLWRCGEPARALQAFTSCSSWRNAICVA
QQIPLPPDQLALLARDLAEKLTEQRRCSEAALLLDQYAKDCEEAILALITGAVWEEALRL
IYVHNRQDITETNLKPALLEAVNSQTGFLEAQVVTFTRHRSRLAVVREQKEKARLDMLDE
EGPDCPDAELYSEASSVLTASKYSQSNSRISSRSSKNRRKAERKKLSLKEGSPMEDRALM
HALSEIITTVDKMREEIHSLLKALVLFQFDKQAGKLQLAYEEALQTMERAVPEVWPEGLL
TGNAPVTGPNSTANSIMASFQQQQQQKPAASQLDPEIPTAPKMRNGVKWKLIVLK
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatctgaagctgctgaagagcctttgtagctcagagctgcagggtcctggttct
cctcagtgtttctctgtgaggtccgacactggctcactcctcatcgcctctcagttctca
gtcacagagtacgacccacacacaggcgaggttgtcagagaaacttcgttaacagctgat
ggttacctgccagaggatggcagcggagtggtggtgggactgcaggacctcgctgagctt
cagtccgcatgtttggccacagcaggcggagacgtcgttctcttcaacctcaacaccagc
caattggagtgtgttggcagtgtggacagcggtcttacgtctatgagctggagtcctgat
gaagaactcgtcattcttacaactggacaggaaacaatcatcatgatgaccaaagatttt
gagccggttactgaggttggaatccaccaagatgattttggtgaagggaagtttatcaca
gtgggttgggggaagaaggagactcagtttcatggctcagagggaaaacaggcagcacag
aagaagattcaggatgtgcagccagccgtggcatgggacgaccgcagacccagagtcacg
tggcggggagatggtcagctgtttgctgtcagcgctatctgtccccagactggagcaagg
aaggtccgagtctggaacagagagggcgttctgcaggccaccagcgagcccatcaacggc
ctggagcaggcactctgctggaaaccttcaggtagcctgattgccagctctcagagacat
cccaacaaacacagcgttgtgttcatggagaagaacggactgcttcacggagacttcaca
ctaccatttagcaaagaccaagccaaggtgaaggagctggtgtggaacagcgactccacc
gttttggctgtttggttggaagacttgactgctggagaggatggaaaagtcaagagttac
atccagctgtggacggtgggaaactaccactggtacctgaagcagagcctggacttcgat
ggagaccctcagaaagctcctgtctgcttctgctgggacccagaacgccccctacgcctc
catgttgtgacccacagctggacgagcatcgcctacgactggggctggacaacagagcga
agccgtggactcgacgtgactgatgacgccagcgtggcggtgatcgatggagagaaagtt
ctggtgacgaccttcaggcagagtgtggttcctcctcccatgtgttcgttcgagctccag
ctgaagtcaccagtgaaccaggtgacttttctctgtcagactgaacggaccaatcagatt
gctgtgttcacctccaatggacagatctcggtgtttggaaaagtttcaaaggaagatttg
gacaaaactgcagatgggttcagcattttgtcccgtcctcttgtcctccagaaatccttc
agattgacggctcctcaggacaatccccttgccctgcggcagctgctgtggctacaggag
gaactgttttttgtcgtcacttctggtgttgtgcccaacacctccaccctgttgatgctt
cgtcctgcgcaggacgcctctgacacactggctgttcggtctcaggtggaggttgaaggt
gttgtgatcagtacggttcactgctctcagactgggactgtggctctgcagctggaggac
ggacaaataaggaaactcctctgggattgtcctgagatgtcagtggaagagtggcgtgac
tccagcggctgcagcatcaactttcctgtttcctgcatccaaacggctctctgctgcata
agtggaacggaatacctgcttggcctcacagacagatcccacctgtacgctggagacaca
gagcttgcgtccaacgttagctcctttgccgtttgtgacgatttcctgctcatcaccact
cactctcacacctgccgctgcctccagctgagcacactcaccctcaaaggtctgcaggtg
gctttgtcctctgatggaggtcagaacgatgagacgcatcggcgagtggagcgaggctcc
aggatcgtgactgtggtccctcaggacaccagagtgattctacagatgcctcggggaaat
ctggagaccattcatcacagagcgctggttctggctcagttaaggaagtggttagatggc
ttcagattcagagaagcatttgagtgtatgaggaagttaaggatcaacctaaaccttatt
tatgaccacaatccaaaggtttttttggaaaatgtcgaaaccttcattacacaactcaac
tccattaaccacattaacctcttcctcactgagctcaaagaagaagatacgacctgcacc
atgtacccccgcccagagagcagcccactgcagagccaggttgtgtcaggccagaaaaag
gttgacgttgtttgtgatgctttacggaaagccatggaggcaatggatgcaaacaagttc
tgtctgtccatattgacttctcacgtgaagaagaccgttcctgagctcgagatcgctctg
cagaaagtgcatgagctgcgagaaaagccacctgaagctccgggagctgtaagcgctgaa
gaggccctaaagtacctcctcttcctcgtcaacgtcaacgatctgtacgaacactcactc
gggacgtacgactttgaccttgttctcatggtggctgaaaaatcacagaaggacccaaaa
gagtatcttcctttcctgaacatgctgaagagcctggagccaaactaccaacgctatacc
atcgacaaacacctaaaacgctacaggaaggctttggtgcatctcagcaagtctggagag
gaacatttcattgaagttctgcagctggtgaaggagcagaaactctacagtgaagctctg
cggttgtacacagcagatagtcctcagtacaagcttgtgagctctgcatatgctgagcac
ctggtggagcagcaacaggccgagcaggccggcttgttgctgtggcgatgcggcgagcca
gccagggcgctgcaggctttcaccagctgctccagttggagaaacgccatctgtgtggca
cagcagataccgctaccgccggaccagttagctctgctggccagagacttggcagagaag
ctgaccgagcagaggcggtgctcagaagctgctctgcttttggaccagtacgccaaagat
tgtgaggaagccatcttggctctaatcactggtgcagtctgggaggaggcgctcagactg
atttatgtgcacaacagacaggatattactgaaaccaacctgaaaccggctctgttagaa
gctgtgaactctcaaacagggttcttggaggctcaggttgtaacatttacccggcaccgg
agccgtttggctgtggttcgagagcagaaagaaaaggccagactggatatgcttgatgaa
gaaggtccagactgccctgatgctgagctttactctgaagctagcagtgtgttgaccgcg
tctaaatactcccagagtaactcccggatctcctcacggtcgtcaaagaaccgccggaaa
gcggagaggaagaagctgagtctgaaggaaggaagcccaatggaggacagagccctaatg
cacgccctgagtgaaatcatcactactgtagacaagatgagagaggagatccacagcctc
cttaaggccttagtgctgttccagtttgataaacaggctgggaaactgcagctggcctat
gaagaagccctgcagacgatggagagagctgttcctgaggtgtggcctgaaggcctgctg
accggcaacgctccggtaactggtccaaactccacagcaaacagcatcatggcttctttc
cagcagcagcagcagcagaaacctgcagcatcacaactagatcctgagatcccaacagca
ccaaagatgagaaacggtgtcaagtggaagctcattgttcttaaataa
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