Xiphophorus couchianus (Monterrey platyfish): 114139588
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Entry
114139588 CDS
T05908
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit isoform X1
KO
K10739
replication factor A2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03030
DNA replication
xco03420
Nucleotide excision repair
xco03430
Mismatch repair
xco03440
Homologous recombination
xco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114139588 (rpa2)
03420 Nucleotide excision repair
114139588 (rpa2)
03430 Mismatch repair
114139588 (rpa2)
03440 Homologous recombination
114139588 (rpa2)
03460 Fanconi anemia pathway
114139588 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114139588 (rpa2)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114139588 (rpa2)
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114139588 (rpa2)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114139588 (rpa2)
MMR (mismatch excision repair)
114139588 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
114139588 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
Irp3-like_C
Motif
Other DBs
NCBI-GeneID:
114139588
NCBI-ProteinID:
XP_027865414
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Position
3:complement(8106731..8115299)
Genome browser
AA seq
325 aa
AA seq
DB search
MPKPPWIKPARNYAYARASPQNRQVKSNLTGDMLDTLSTGNIRLKQRRGLKGGYSESGMM
GGYTQSPGGFASPSLSQGGEKKGRTRATQIIPCTVSQLMSASQVDEVFRVGDVEVTQVTI
VGIIRSTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDPSVDSTVLPPGTYVKVSGNLRSFQ
NHRSVVAFSVRTLEDMNEITSHILEVVHAHMALGKPQTMPAIGGGMTVNSMPMLQQGPGM
TAGSYAGTNEIPLMVINGLSGNQNQVLSLIKGCPDPQGISIQDLKQRLNGISLTVIKQAV
EFLSNEGHIFSTIDEDHYKSTDNDD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacctccctggataaaaccagcgcgtaattacgcatatgcaagagcctctcca
cagaatagacaagttaaaagcaaccttacaggagacatgttggacaccttgtcaacggga
aacattcgactaaagcaaaggagaggtttaaaaggaggatacagcgagtctgggatgatg
gggggctacactcagtcccctggaggatttgcatccccttccctgtcccagggaggagag
aagaaagggaggacccgggccacacaaataatcccctgcacagtgtcccagctgatgtcc
gcctcgcaggttgatgaggtcttcagagtgggagatgtggaagtgacacaggtcaccatt
gtgggcatcattagaagtacagacaaatctatgaccaatatccagtacaaggtggacgac
atgactggcgctcctatggatgtgaagcagtgggtagacacagaggacccgagtgtggac
agcacagtgttgcccccaggaacctatgtgaaagtgtcagggaatctgcgctcctttcag
aaccacagatctgttgtggcattcagcgtcaggaccctggaggacatgaatgaaattaca
tcgcacattctggaggttgtccatgcgcacatggcgcttggcaaacctcaaaccatgcca
gctattggtggaggaatgactgtaaacagcatgccaatgctccaacaaggcccagggatg
actgcagggagctatgcaggcaccaatgagatcccactaatggtcattaatgggttaagt
gggaatcagaaccaggtgctgagtttgataaaaggctgtccggaccctcagggtattagc
attcaggatctgaagcaaaggctcaacggcatcagtcttacagtgatcaaacaagcagtg
gaattcctgagcaatgaaggccacatcttttcaactatagacgaggatcactacaaatca
acagacaacgacgactaa
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