Xiphophorus couchianus (Monterrey platyfish): 114139593
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Entry
114139593 CDS
T05908
Symbol
gabrb2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114139593 (gabrb2)
04082 Neuroactive ligand signaling
114139593 (gabrb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114139593 (gabrb2)
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114139593 (gabrb2)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
114139593
NCBI-ProteinID:
XP_027865417
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Position
23:19000701..19049503
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AA seq
526 aa
AA seq
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MGRIRENHFGILTFSLLLTFIWAQSVKDIKDPSNMPLVKETVDRLMKGYDIRLRPDFGGA
PVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGDGAVSGVDRIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQKKAAEKAATANNEKLRPDPN
KWLVGNVVQRDDALYARMKQREIDAYDSMWDPIFVDDAALGLGDQRNKMTPDDNILFSAM
EMKNEMGGAGDLSRGLGAPTDPRNTMLAYDSSTLQYRRAAMARQNYGHSALERHAQKKSR
LRRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVIYWLYYVH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatcagggaaaaccactttgggattttgactttttccttattgttgaccttc
atctgggctcaaagcgtcaaggatattaaggatccgagcaatatgcctcttgtgaaggaa
acagtggaccggctgatgaaaggatacgacattcggttgaggccggattttggaggtgct
cctgtggcggtggggatgaatattgacattgcaagcatagatatggtatctgaagtaaat
atggactacactttgaccatgtacttccaacaagcgtggcgggacaagcgcctctcatac
tcagagatcgcctacaacctgacgctggacaaccgggtggctgaccagctctgggtccct
gacacctacttcctcaatgacaagaagtcctttgttcacggcgtcacggtcaagaacagg
atgatccgtctccaccccgatgggacggtgctttacgggctccgcatcactacgactgct
gcctgcatgatggacctgcgccgctaccctctggatgagcaaaactgcactctggagata
gaaagctacggatacaccacagatgacatcgagttttactggcgaggtggggacggcgct
gtgtctggggtcgacaggatagagctgccgcagttctccattgttgactacaagctcatc
tccaagaatgttgtcttctcgacaggttcttacccccgcctgtctctcagcttcaaactg
aagaggaacatcggttacttcatcctgcagacatacatgccttccatcctgattaccatc
ctctcctgggtctccttctggatcaactatgatgcatctgctgccagagtggccctggga
atcactacggtgctgaccatgacaaccatcaacactcacctgcgagagacgctccccaag
atcccctatgtgaaggccatcgacatgtacctgatgggctgctttgtgttcgtcttcctg
gctctgctggagtacgctttcgtcaactacatcttcttcggccagggtccccagagacag
aagaaggcggctgagaaagcggccacggccaacaacgagaagctgagacccgaccccaat
aagtggctggtgggaaatgtagttcaaagagatgatgctctgtatgccagaatgaaacag
agggaaattgacgcatatgactcgatgtgggatcccatctttgtggacgatgccgcttta
ggactaggcgatcaaagaaataagatgacccccgatgacaacatcctgttcagcgccatg
gagatgaagaatgagatgggcggtgccggggatctgtcccggggtctgggagctcccacg
gatccccgcaacaccatgctggcctacgacagctccacgctgcagtaccgcagggcggcc
atggcccggcaaaactatggccacagtgccttggagcgccacgcccagaagaagtcccgc
ctacggagacgggcctcgcagctcaaggtgaacatcccagacctgtccgacgtgaactct
atcgataagtggtccaggatgatcttccccaccgtcttctccttcttcaacgtgatctac
tggctctactacgtccattaa
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