Xiphophorus couchianus (Monterrey platyfish): 114139595
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Entry
114139595 CDS
T05908
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114139595
04082 Neuroactive ligand signaling
114139595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114139595
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114139595
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
114139595
NCBI-ProteinID:
XP_027865420
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Position
23:18992892..19000088
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AA seq
446 aa
AA seq
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MAADPLSVAALICLISVANAQGGEKVYSDNITLILDRLLDGYDNRLRPGSGGGITEVKTD
IFVTSFGPVSDVEMEFTMDMFFRQMWVDERLKFEGPIEILRLNNRMVDKIWTPDAFFRNS
KKSISHNMTTPNKLFRIMQNGTVLYTMRLTISAECPMNLMDFPMDGHACPLRFGSYAYTN
SEIIFTWRKGLAGSVECPKESISLLQYDLVGQILSSEIMRLNTGQYSVQVVHFLLQRKLG
YYLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVAYAT
AMDWFIAVCFAFVASALVEFAAVNYFATLQANRLKKQRARQDRLEVLATGSDDDDTISTD
SSHQEGLKRRNHSVSCSEVGYTPPVPIFLQQGSAFPQIPQLAGTSPIDLYARILFPLTFA
LFNLGYWYIYLTKETIESATAMDLKN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaccctttatctgtggctgctctaatctgcttgattagtgtagctaatgca
caaggaggtgaaaaagtatactcagacaacatcactctcattttggatagacttttggat
ggttatgacaacagactgcgacccggttcaggaggtggtattacagaggtgaaaacagac
atctttgtcaccagttttgggcctgtttcagatgttgagatggaattcaccatggacatg
ttcttccgtcagatgtgggtcgatgagcggctgaagtttgagggccccattgaaatctta
cgtcttaacaaccgcatggtggacaagatttggacaccagacgccttttttagaaattca
aagaagtccatttcccataatatgaccacacccaacaagctcttccgtataatgcagaat
gggactgtcctctacaccatgagactaacaatcagtgcagagtgtccaatgaacctcatg
gatttccccatggatggccacgcctgtcctctcaggtttgggagctatgcgtacaccaac
agtgaaattattttcacctggaggaaaggattagcaggctctgtcgaatgtcccaaagag
tcaataagtcttctgcagtacgatctggttggacagatcttgtccagtgagataatgagg
ttaaacacaggtcagtattctgtgcaggtggtccatttccttctccagagaaagctcggc
tactacctcatacagacctacatccccctaatcatggtagtcgtgctgtcacaggtttcc
ttttggatcaacaaagagtctgttccagcacgtacagtcgctggcatcaccacggtgctg
accatgaccaccttgagcatcagtgctcggcagtctttgcccaaagtggcttatgctaca
gccatggactggttcatcgctgtgtgtttcgccttcgtggcctctgccctcgttgagttt
gcagcagtgaactactttgccaccttgcaggcaaaccgcctgaagaagcagagagccaga
caagacaggctggaggtgctggccactggcagtgacgatgacgacacaatatctacggac
agcagccaccaagaaggcctgaagaggagaaaccactcagtgagctgcagcgaggttgga
tatacccccccagtgcccattttcctccagcaaggctcggcttttcctcaaatccctcag
cttgctggaacaagtccgattgacctctacgcccgcatcctctttcccctgacctttgcc
cttttcaacttagggtattggtacatatatctgaccaaagaaaccattgagtcggctacg
gccatggatctgaaaaactga
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