Xiphophorus couchianus (Monterrey platyfish): 114139598
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Entry
114139598 CDS
T05908
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco02010
ABC transporters
xco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114139598
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114139598
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114139598
Transporters [BR:
xco02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114139598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
114139598
NCBI-ProteinID:
XP_027865424
LinkDB
All DBs
Position
23:178362..224294
Genome browser
AA seq
2315 aa
AA seq
DB search
MTSRTNVGDPSGFEGSMSTERVAAGQQSCTAAAADMSVFTQLGLLLWKNFTYRRRQTLQL
LVEIIWPLFIFFILIAVRLNYPPYEQHECHFPNKAMPSAGTLPWIQGILCNANNPCFRNP
TPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDRNLEGFKELARALEVLQSSRSGFKLK
HFLRDNETLSNFLQRNASLSRHAALQIAEADIDLEQVVLRGWGVHLRDMCPRSGGTADMK
DFVAIGDQQVAAQVQEILCQAPPTWLDRAEQNFMSNLDFFKPIRRDVRSDPEAVQKVAGA
INNLLVSLGSLAVELAGMKSWVDLRNEIVFLTRNATASPSVLYKAVSRIVCGHPEGGGLQ
IKSLNWYEDSNYKALFGNHNGSEDAAAALYDNSSTPFCNNLVQNLDSNPMSRMIWQALKP
LLLGKILYTPNTPATQRIIHEVNRTFQELGVFRDLGGMWEEMRPKVWDFMENSQQMDVIR
TLLKNNITASFFHAQLAGTDWTVADVTNFLSKQPAELPGGALTWREVFNETDQAIMSISH
FMECVNLDKLEPVSTEERLVNRSMVLLEDRKFWAGIVFPDIGPNATELPPKVNYKLRMDI
DNVERTNKIKDAYWDPGPRADPFEDMRYIWGGFLYLQDVIEQGIVRAVTGIKEKTGVYIQ
QMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVSIILKSVVYEKEARLKETMRIMGLDNGI
LWLSWFISSLVPLLVSAALLVLVLKKGNLLPYSDPGIIFVFLGSYAVVTIMQCFLISTVF
ARANLAAACGGIIYFTLYLPYVLCVAWQDYIGYGVKVFASLLSPVTFGFGCEYFALFEEQ
GVGIQWKNLVSSPLQEDEFSLRTTIIMMYFDSFLYGVLTWYIEAVFPGQYSIPRPWYFPF
SKSYWFGEEGKSNKLPLNRKGNAAAVCVEEEPAHLEPGVYIENLVKVYRHGKKLAVDGLT
LGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRTDLSAIRQSLGVCPQ
HNVLFSMLTVEEHIWFYARLKGLSEEQVSAEIEHILQDTGLPHKRRSRTSTLSGGMQRKL
SVALAFVGGAKVVILDEPTAGVDPYARRGIWDLLLKYRQGRTIILSTHHMDEADILGDRI
AIISHGKLCCVGSSLYLKTQLGTGYYLTLVKKEAEPSLSSCRNSSSTVSFTKKDEESASV
SSSDAGLGSDHESEAAAIDHAAAICTPPDSSSVSGLIQHHVPAARLVEDLGHELTYVLPY
SAAKDGAFVALFRELDLKLQELGISSYGVSDTTLEEIFLKVAEDNGVDTEVPSDGTLPVW
RRRRTHAFGGGDHQSCLRPNTDNDCNDSDGDADCRETDWLGGTEGKGSVQVTGWSLKRQQ
FVALMWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEEQV
TFFSSDDAPGDTNMQKLLSALLDPPGFGTRCMDGYSIREAPCTMGDDDWSTPLVPDSVKQ
LFSSRNWTMEHPSPACSCTCDGRKRMLPDCPAGAGGLPPPEMKLSSSDTLQNLTGRNVSD
YLVKTYADIIGKSLKNKVWVNEFRYGGFSLGARSTQVFPAANEVDDAIERVRKVFELQKG
SAADRFLDNLSGFINGLDTKNNVKIWFNNKGWHSVAAFINVLSNGVLRANLPPGAEPGRY
GITSFNHPLNLTKEQLSQVALVTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHM
QFISGVHPLLYWLANFTWDMCNYCVPATLVILIFICFQQKAYVSSSNLPVLALLLLLYGW
SITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSISTFVMELFGDHEIGGINDILKNVL
LVFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLDWDMVGKNLFAMAVEGVVFFIIT
ILIQYRFCIKPRPVSKLTKLGPLGEEDEDVARERHRIVQGLGQGDILELRQLTKVFKRKQ
KPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTLVTSGEAFLAGKSILREIEDVH
QNMGYCPQFDAINELLTGREHLELYAILRGVPEGEVCDVAEWGIRKLSLLKYADKRAGSY
SGGNLRKLSTAISLIGAPPVVFLDEPTTGMDPRARRALWNCIHSVIKEGRSIVLTSHSME
ECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDLRPVMKFIESELSG
STLKEKHRNMLQYQLPSSLSSLAHIFSTFANNKDALRIEDYSVTQTTLDQVFVNFAKDQS
DDYLSKDVSVRRKEVIVDVLVPSSTCGGAEGESVM
NT seq
6948 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcagaaccaatgtcggcgacccgtctggatttgaagggtccatgtccacagag
cgggtggcggccggccagcagtcctgcacggcggcggctgcagacatgtccgtgttcaca
cagctgggcctgctgctgtggaagaacttcacctacagacgccgacagacgctccagctg
ctggtggagatcatctggccgctcttcatcttcttcatcctcatcgctgtgcggctcaac
taccccccctatgagcagcatgagtgtcacttccccaacaaggccatgccgtcggcggga
acgttgccgtggattcaggggatcctctgcaacgccaacaacccgtgcttcaggaacccg
acgccgggcgagtcgccgggcgtcgtcggaaacttcaacgactccataatttcccgcctg
ttttcagatgccaagaagattttgctctacagccagaacgaccgaaacctggagggcttc
aaggagctggcccgggccctggaggttctgcagagcagccgctcaggtttcaagctgaag
catttcctgcgagacaacgagacgctttccaacttcctgcagaggaacgcctcgctgtcc
cgacacgccgccctgcagatcgccgaggccgacatcgacctggagcaggtcgtcctcaga
ggctggggcgtccacctgagggacatgtgtccccgcagcggcgggacggccgacatgaag
gacttcgtcgccatcggagaccagcaggtggcggcgcaggtgcaggaaatcctctgccag
gctccgcccacctggctggaccgagccgagcagaacttcatgagcaacctggacttcttt
aaacccatccggagggacgtccggtcggacccggaagccgtccagaaggtcgccggcgcc
atcaacaacctcctggtcagtctgggttctctggccgtcgagctggccgggatgaagagc
tgggtggacctgcggaacgagatcgtgttcctgacgcggaacgccacggcgtcgcccagc
gtcctctacaaggccgtctccaggatcgtgtgcggccacccggagggcggcggcctgcag
atcaaatccctcaactggtacgaagacagcaactacaaggctctgttcggcaaccacaac
ggcagcgaggacgccgccgccgcactctacgacaactcctccactccgttttgcaacaac
ctggtccagaacttggactccaacccgatgtcccggatgatctggcaggccctgaagcct
ctgctgttggggaagatcctgtacacccccaacactccggccacccagaggatcatccac
gaggtgaaccggaccttccaggagctcggtgtgttcagggacctgggcggcatgtgggag
gagatgagacccaaagtgtgggacttcatggagaacagccagcaaatggatgtaatcagg
actctgctgaagaacaacatcaccgccagcttcttccacgctcagctggccggcaccgat
tggaccgtggccgacgtcaccaacttcctgtccaagcagccggcagagctgcccggtggc
gccctcacctggagggaggtgttcaatgagaccgaccaagccatcatgagcatttctcac
ttcatggagtgtgtgaacttggacaagctggaaccagtgtccactgaggagcggctcgtc
aaccgctccatggttctgctggaggaccggaagttctgggccgggatcgttttccctgac
atcggacccaacgccaccgagctgccaccaaaggtcaactacaagctgcgcatggacatc
gacaacgtggagcggaccaacaagatcaaagacgcttactgggacccgggtcctcgggcc
gacccgtttgaggacatgcggtacatctggggcgggttcttgtacctgcaggatgtcatt
gagcaaggcatcgtcagagcggtgaccggcatcaaggagaagaccggcgtctacatccag
cagatgccgtatccgtgctacgtggacgacatcttcctgcgggtgatgagccgctccatg
ccgctcttcatgacgctggcctggatgtactcggtgtccatcatcctgaagagcgtggtg
tatgagaaggaggcgcggctgaaggagaccatgaggatcatgggcctggacaacggcatc
ctgtggctgagctggttcatcagcagcctggttccgctgctcgtcagcgccgcactgctg
gttctggttctgaagaaggggaacctgctgccttacagcgaccctggcatcatcttcgtc
ttcctgggatcgtacgccgtggtcaccatcatgcagtgcttcctcatcagcaccgtgttc
gctcgcgccaacctggccgctgcctgtggaggcatcatctacttcaccctctacttgccc
tacgtcctctgcgttgcctggcaggactacattggatacggagtcaaagtgtttgctagc
ctgctgtcccccgtgacctttggcttcggctgtgagtactttgcgctgtttgaggagcag
ggagtcgggatccagtggaagaacctggtgtcgagtcctcttcaggaagatgagttcagc
ctccgcaccaccatcatcatgatgtactttgactccttcctgtacggagtcctcacctgg
tacatcgaggccgtgtttccaggtcagtacagcatccctcggccctggtatttccccttc
tccaagtcctactggtttggagaggaggggaagtccaacaagcttccactgaaccggaaa
ggaaacgctgcagctgtgtgtgtggaggaagagccagcccacttggagccgggagtctac
atcgagaacctggtgaaggtttaccgtcacggaaagaaactggccgtggacggactgact
ctgggattctacgagggacagatcacctcctttctgggacacaacggcgctggaaagacc
accacaatgtccatcctgaccggcctgttcccgccgacctccggcaccgcctacatcctg
gggaaggacatccggacagatctgagcgccatcaggcaaagcctgggcgtctgtcctcag
cacaacgtcctcttcagcatgctgacggtggaggagcacatctggttctacgcgcggctc
aaagggctgtcagaggagcaggtgtcagctgagatcgagcacatcctgcaggacacgggg
ctgcctcacaagcggcgctccaggaccagcacgctgtccggcggcatgcagaggaagctg
tcggtcgccctggcctttgtcgggggggccaaggtggtgatcctggacgagcccacggcc
ggagtcgacccctacgcccgcagaggcatctgggacctgctgctgaagtaccggcagggc
cggaccatcatcctgtccactcaccatatggacgaggcggacatcctgggggaccgcatc
gccatcatctcccacggcaagctgtgctgcgtgggctcgtctctgtacctgaagacgcag
ctggggacgggatactacctgacgctggtgaagaaggaggcggagccgtcgctcagctcc
tgcaggaactcgtccagcaccgtgtccttcaccaagaaggatgaggagagcgcctcggtc
agcagcagcgacgccggactcggcagcgaccatgaaagtgaggcagccgccatcgaccac
gccgccgccatctgcacgccgccggactcgtcctcggtctccggcctgatccagcaccac
gtcccagccgcccgcctggtggaggacctgggacacgagctgacctacgtcctgccatac
agcgccgccaaggacggcgccttcgtagcgctcttcagagagctggacctgaagctgcag
gagctgggcatctccagctacggcgtgtccgacaccacactggaggagattttcctgaaa
gtggctgaagataatggagtggacactgaagtaccctcagatgggacacttcctgtttgg
cggcgcaggaggactcacgccttcggaggcggcgaccatcagagctgcctgaggccaaac
actgacaacgactgcaacgactccgatggagacgccgactgcagggagacggactggctg
ggcggcactgaggggaaaggttcggtccaggtgactggttggagcctgaagaggcagcag
tttgtggcactgatgtggaagcgcttcctgtacgcccggcgctccaggaagggcttcttt
gctcagattgtccttccggccgtgttcgtctgcatcgccctggtcttcagcctcatcgtc
cctccgttcgggaagtaccccagcctggagctgcagccctggatgtacgaggaacaggtg
accttcttcagcagtgatgacgctccaggggacaccaacatgcagaagttacttagcgcc
ctgttggacccgccgggctttgggacacgttgcatggacgggtattccatccgggaggcg
ccctgcaccatgggggacgatgactggagcacccccctggtccctgacagcgtcaagcag
ctgttcagctccaggaactggaccatggagcatccgtcgccggcctgctcctgcacctgt
gacggcaggaagaggatgctgcctgactgcccggcaggagccggcggtctgccgccacct
gagatgaagctgagcagctcagacactctgcagaacctgacaggacggaacgtctcggac
tacctggtgaagacgtatgctgacatcatcgggaagagcctgaagaacaaagtatgggtc
aacgagttcaggtatggaggcttctcattgggcgccaggagcacacaggtctttcctgca
gccaatgaggtcgatgacgccatcgagagagtccgaaaggtttttgagttacagaagggt
tctgctgcagaccggttcctggacaatctgtccggcttcatcaatgggctggacaccaag
aacaacgtgaagatttggttcaacaacaaaggttggcacagtgtggctgccttcatcaac
gtgttgagcaacggcgtcctgagagccaacctgccgccaggtgcggagcccggtcgctac
ggcatcacttccttcaaccacccgctcaacctgaccaaggagcagctgtcccaggtggcg
ctggtaacgacctcggtggacgtcctggtgtccatctgcgtgatcttcgccatgtccttc
gtcccggccagcttcgtagtcttcctcatccaggagcgcgtcagcaaagccaaacacatg
cagttcatcagcggcgtgcatccgctgctctactggctggccaacttcacctgggacatg
tgcaactactgcgtcccagcaacgctcgtcatcctcatcttcatctgcttccagcagaaa
gcctacgtctcctccagcaacctgccggttctggcgctgctgctgctgctctacggctgg
tccatcacgcccctcatgtacccggcctccttcttcttcaagatccccagcacggcctac
gtggtcctgaccagcgtcaacatcctcatcggcatcaacggcagcatctccaccttcgtc
atggagctgttcggcgaccacgagatcggcggcatcaacgacatcctgaagaacgtcctg
ctggtcttccctcacttctgcctcggccgcggcctcatcgacatggtgaagaaccaggcg
atggccgacgccctcgagagattcggtgagaacaggttccggtcgcccctggactgggac
atggtgggaaagaacctgttcgccatggcggtggagggcgtggtcttcttcatcatcacc
atcctcatccagtacaggttctgcatcaagcccaggcccgtcagtaaactcaccaaactg
ggaccactgggagaggaggacgaggacgttgcgcgtgagagacaccgcatcgtccagggc
ctgggacagggggacatcctggagctccggcagctcaccaaggtgttcaagcggaagcag
aagccggcggtggaccggctgtgtgtcgggattcctcctggagagtgcttcggtctgctc
ggtgtgaatggagctggaaaaaccacaaccttcaagatgctgacaggagacaccctggtg
accagcggagaggccttcctggccggcaagagcatcctgcgggagatcgaggacgtccac
cagaacatgggctactgccctcagtttgacgccatcaacgagctgctgacaggaagagag
cacctggagctgtacgccatcctcagaggcgtcccggagggggaggtctgcgacgtggcg
gagtggggcatcaggaagctgagtctgctgaagtacgccgataagagagcaggaagctac
agcggaggaaacctgaggaagctgtccactgccatttctctgatcggagcgccccctgtg
gtcttcctggacgagccgaccacagggatggaccccagggcccgacgggccctttggaac
tgcatccacagcgtcatcaaggagggccgctccatcgtcctcacctcacacagcatggag
gagtgtgaggctctctgcaccaggatggccatcatggtgaacggcaggttccgatgtctc
ggcagcgtccaacacctgaagaacaggttcggggacggctacaccatcatcctgcgggtg
gcggggcccgacccggacctgcgtcccgtcatgaagttcatcgagagcgagctgagcggc
agcacgctgaaggagaagcatcgcaacatgctgcagtaccagctgccctcctcgctctcc
tcgctcgcccacatcttctccaccttcgccaacaacaaggacgcgctgcggatcgaggat
tactccgtcacccagaccaccttggaccaggtgtttgtgaactttgcgaaggaccagagt
gacgactacctgtccaaagacgtttcggtgagacggaaggaagtgatcgtcgacgtgctg
gtgccgagctccacctgcggcggtgcagagggcgagagcgtcatgtga
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integrated database retrieval system
