Xiphophorus couchianus (Monterrey platyfish): 114139600
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Entry
114139600 CDS
T05908
Symbol
tbc1d9b
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 9B
KO
K19951
TBC1 domain family member 8/9
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114139600 (tbc1d9b)
Membrane trafficking [BR:
xco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114139600 (tbc1d9b)
Endosome - Golgi transport
Rab GTPases and associated proteins
114139600 (tbc1d9b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
114139600
NCBI-ProteinID:
XP_027865430
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All DBs
Position
23:complement(337897..346674)
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AA seq
1222 aa
AA seq
DB search
MWIEPEEVLLAGALWVSERANPFFILQRRRGHGRGGGLSGLLVGTLDVVLDSSARVAPYR
ILLQTADSQIYWNIACGSSRKEITEHWDFLESNLLQTISIFDNDEDVITFVKGKISGIIA
EENRLKRSEEQEENSGKFLEAELKMRKLFGMPEEEKLVNYYSCSYWKGRVPRQGWLYLSI
NHLCFYSFLLGKEVTLVVQWTEVTQLEKNATLVFPESVRVSTRNAEHFFSMFLNVNDTFK
LMEQLANIAMRQLLDNEAFAADRLLPKACKTLKNVSALKRDFDARAKNERYRSMFRLTQD
ERLDGHTDCTLWTPFAKMHVVGQLFISNNYICFSSREEDLCQLIIPLREVTIVEKADSSS
VLPCPVSISTKNKMNFLFANLKDRDFLVQRISDFLQRTPDGSWSDTNPLSLIGSSVRQAW
LSEPCGSGSVLCLSVPRAPPASPNPQDPTPSTRGAITTAAPTAQQGLLRLFQQDGPEDLG
PKAMKERMKEEAWNIHFSEFGRGVCMYRTSRTRELVLNGIPERLRGELWLLFSGAQNEMA
SHPGYYGDLVEQATGLCSLATEEIERDLHRSMPEHRAFQNETGIAALRRVLTAYAHRNPN
IGYCQAMNIVTSVLLLYGTEEEAFWLLVALCERMLPDYYNTRVVGALVDQAVFEELTRAF
LPPLYDHMQALGVITTISLSWFLTLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHD
NMDALLVCSDEGEAMTVLGRYLDNVVNKQTVAPPTPHLHALLTSGDDPPPEIDVFDLIKA
SYEKFGSLRSDVIEQMRFKQRLKVIQSLEDTAKRSVVRAMMTELAFSIEELEELYCLFKS
KHMTSCYWGSSNSAAQRHDPSLPYLEQYRIDPVQFAQLFSALSPWVCGSHTPTLSARLFR
LLDQNQDGLVNFKEFSTGLSGMYHGDMTEKLKLLYKLHLPPALCAEEAESALEATHFFTE
DKLQESSFLSDLDSVRQQEVTSGEEPKNGGEDGEEKKEVKDYRYYLRMWAKEKEPKRETI
KDLPRMNQEQFIELCKTLYNMFSEEPSEQQLYHAIATVASLLLRIGEVGKKFGNGAKKAE
APPPIPPGEEGPGEGTSTDAQVCRALADAQLEPPAPPSDEETKDDTSVSSFSVVSSGSLQ
CEDIADDTVLVSGEERRGSALDADWSITFEQVLASLLTEPALVEYFERKMDIQVKMAACK
AQRAVERQISSASDHELSQQSS
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcgaaccggaggaggttctactggccggggctctttgggtctcggagcgggcc
aacccgttcttcatcctgcagaggaggagggggcacggccgcggaggggggctgtccggt
cttctggtgggaacgctggacgtggttctggactccagtgccagggtggctccctacagg
atcctgctgcagaccgccgactcccagatctactggaacattgcttgtggctcgtcgagg
aaggagatcacggagcactgggatttcctggaatccaacctgctgcagacgatctccatc
ttcgacaacgatgaagacgtcatcaccttcgtcaaaggaaagatctcgggcatcatcgcg
gaggagaaccgactgaagcggagcgaggagcaggaagagaacagcgggaagttcctggag
gcggagctgaagatgcggaagctgtttgggatgccagaggaggagaagctggtgaactat
tactcctgcagctactggaaggggcgtgtcccgcgccagggctggctctacctgtccatc
aaccacctgtgcttctactccttcctgctggggaaggaagtgacgctggtggtgcagtgg
accgaggtgacccagctggagaagaacgccaccctggtgttcccagagagcgtccgcgtg
agcacccggaacgctgagcatttcttctccatgttcctgaacgtcaacgacaccttcaag
ctgatggagcagctcgccaacatcgccatgcgccagctgctggacaatgaggcgttcgct
gccgaccgcttgctgcccaaggcctgcaagacgctgaagaacgtctctgccctgaagagg
gacttcgacgcccgggccaagaacgagcggtaccggtccatgttccggctgacgcaggac
gagcggctggacggacacacggactgcacgctgtggacgccgttcgccaagatgcacgtg
gtgggccagctgttcatctccaacaactacatctgcttcagcagcagagaggaggacctg
tgccagctcatcatcccactcagagaggtgaccatcgtggagaaggcggacagcagcagc
gtcttgccgtgtcccgtctccatcagcaccaagaacaagatgaacttcctgttcgccaac
ctcaaagacagggacttcctggttcagcggatctcagacttcctgcagcggacgccggac
ggctcgtggagcgacaccaacccgctgtctctgattggctcctcggtacgccaggcctgg
ctgtcagaaccttgtggttctggttctgtcttatgtctttctgttcccagggctccaccg
gcgtcccccaatccgcaggatccgactccgtccacgaggggcgccattaccacggcggcc
cccaccgcccagcagggcctgctgcggctgttccagcaggacggcccggaggacctcggc
cctaaagctatgaaggagcggatgaaggaggaggcgtggaacattcacttctctgagttc
ggccggggcgtctgcatgtacagaacctccagaacccgagagctggttctgaacgggatc
ccggagcgcctgaggggggagctgtggcttctgttctccggcgctcagaacgagatggcc
tcccaccctggttactatggcgacctggtggagcaggccacgggcctctgctcattggct
accgaggagatcgagcgcgaccttcatcgctcgatgcccgagcacagagccttccagaac
gagacgggcatcgccgcgctgcgccgcgtcctgaccgcctacgcccaccgcaaccccaac
atcggctactgccaggccatgaacatcgttacatccgtcctgctgctgtacggaaccgag
gaggaggccttctggctgctggtggcgctgtgcgagcgcatgctgcccgactactacaac
acccgggtcgtaggagcgctggtggaccaggccgtgtttgaggagctgacccgggccttc
ctgccgccgctctatgaccacatgcaggcgctgggcgtcatcaccaccatcagcctgtcc
tggttcctcaccctcttcctgtccgtcatgccgttcgacagcgccgtcctgctggtcgac
tgcttcttctacgaaggcatcaaggtcatcttccaggtggcgctggccgtccttcacgac
aacatggacgccctgctggtctgcagcgacgagggcgaggccatgaccgtcctgggcagg
tacctggataacgttgtgaacaagcagacggtggctccgcccactccccacctgcacgcc
ttgctgacgagcggagatgaccctccgccggagatcgacgtcttcgacctcatcaaggca
tcctatgagaagtttggcagcctgcgctctgatgtcatcgagcagatgcgttttaagcag
aggttaaaggtcattcagtcgctggaggacacggcgaagcggagcgtggtgagggcgatg
atgacggagctggccttcagcatcgaggagctggaggagctttactgtctctttaagtcc
aagcacatgactagctgctactggggctccagcaactcggcggcgcagcgacacgacccc
agcctgccctacctggagcagtaccggatcgacccggtccagttcgcccagctcttctcg
gcgctgtccccctgggtctgcggaagccacacccccacgctgtcggcccggctcttcagg
ctgctggaccagaaccaggacgggctggtcaacttcaaagagttcagcaccggcctcagt
gggatgtaccacggcgacatgacggagaagctgaagctgctctacaagctccacctcccg
ccagctctgtgtgctgaggaggcggagtctgctctggaggccacacacttctttactgag
gacaaactacaagaatcctccttcctgtctgatctggattctgtgcggcagcaggaagtg
acatcaggtgaagaaccgaagaatggaggagaagatggtgaggagaagaaagaggtgaag
gactacaggtactacctgaggatgtgggccaaggagaaggagcccaagagggaaaccatc
aaggatttgcccaggatgaaccaggagcagttcatcgagctttgtaagacgctgtacaac
atgttcagcgaggagccgagcgagcagcagctgtaccacgccatcgccactgtggccagc
ctcctgttgcgcatcggagaggtcggcaagaagtttggcaacggcgccaagaaggccgag
gccccgcctcccatcccgccgggggaggaggggcccggcgagggaacctcgaccgacgcc
caggtgtgccgggctctggccgacgcccagctggagccgccagcgccgccatctgacgag
gagacgaaggacgacacgtcggtgtcgtcgttctcggtggtgagctccggctcgctgcag
tgcgaggacatcgccgacgacacggtgctggtcagcggcgaggagaggcggggaagcgcg
ctagatgctgattggtcaatcacctttgaacaagtgctggcctcactgttgacagaaccg
gcgctggtcgagtattttgagaggaagatggatatccaggtcaaaatggctgcctgtaag
gcccagcgggctgtcgagcgccagataagctccgcctccgaccacgaactcagccagcag
tcctcctga
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