Xiphophorus couchianus (Monterrey platyfish): 114139617
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Entry
114139617 CDS
T05908
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114139617 (rnf4)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114139617 (rnf4)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114139617 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf_RING_Vps8
zf-rbx1
zf-C3HC4_4
Rtf2
Prok-RING_4
zf-RING_6
TRAF3_RING
zf-RING_10
zf-UDP
zf-P11
zf-RING_11
PD-C2-AF1
zf-RING_16
zf-ANAPC11
Zn_ribbon_6
IBR_1
DZR
HypA
Motif
Other DBs
NCBI-GeneID:
114139617
NCBI-ProteinID:
XP_027865455
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All DBs
Position
23:323159..329229
Genome browser
AA seq
196 aa
AA seq
DB search
MSSSVSRLDLQPPDQAQRKRRPAGSSLVSRTKTSRAASGRTRRTAGAGDHAPPTEPIDVM
DGAEDGVEEVVDLTCEGSESAVVDLTTNNESELLVDEGPPGESYVLSSDEDEDAPTVVQA
AITSTAHTSRLTPGLISCPVCLDLYSEIVESGRLVVSTKCGHVFCSQCLRDALTSSHTCP
TCRKRLTSRQYHPLYI
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctcggtgagtcggttggatctgcagccacctgatcaggctcagaggaagcgg
cggcccgccggaagctctctggtctccagaaccaagaccagcagagcagccagtggtcgg
acccgcaggacagccggcgccggagaccacgccccccccacggagcccatcgacgtgatg
gacggcgccgaggacggtgtggaggaggtggtggacctcacctgcgagggatcagagtct
gctgtggttgacctgacgaccaacaacgagtcggagctgctggtggacgaagggcctccg
ggtgagagctatgtactcagcagtgatgaagatgaagacgcgcccactgtcgttcaagct
gccatcacctctactgcacacacgtccaggttgactccaggtctcatcagctgtcccgtc
tgtctggacctgtactccgagatcgtagagagcgggcgattggtcgtctccacaaagtgt
ggccacgtgttctgcagccagtgtctgagggacgctctgacatcatcacacacctgcccc
acctgcaggaagcggctcacttcgcgccagtaccaccctctttacatctga
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integrated database retrieval system
