Xiphophorus couchianus (Monterrey platyfish): 114139663
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Entry
114139663 CDS
T05908
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114139663 (gabra4)
04082 Neuroactive ligand signaling
114139663 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114139663 (gabra4)
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114139663 (gabra4)
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
114139663
NCBI-ProteinID:
XP_027865504
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Position
23:complement(25732116..25759221)
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AA seq
556 aa
AA seq
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MLFAKKKEMVTATRPAFIRTLVYFFCLTTCAKTISGQSRKDERIYPENFTRILDRLLDGY
DNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPVEILRL
NNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTINAECPMKLVDF
PMDGHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNTQIERAKKKPGKCP
PVPQSTPVKVKDTEEVQQQVPDTNGSLRKRMNYISHQDLAGQPRAQSTTNISGLGRGRRL
RALAGGTNSSSSTLSRSSPKSESLLSVASSSAQLMKGTPQPAASSPDVMAGTPGRRDAGP
ASLQHLLGPKLERIQMMGNKLEPKQTPCSQPTAAGMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTVVAKGG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgcaaagaagaaggagatggtgacggcgacgcgacccgcgttcattcggacc
ctggtctactttttctgtttgacgacttgtgcgaaaacaatctccggacaatcaaggaag
gatgagaggatttacccggagaattttactcggattttggaccgactcctggacggctac
gacaacaggctgcgacctggattcggaggtcctgtgacagaggtgaagactgacatttat
gtgacaagttttgggccagtctcagacgttgaaatggaatacactatggatgtattcttt
cggcagacctgggttgatcggagattgatgtacgagggtccagtggagatactgagactt
aacaacctgatggtgaccaaggtctggacaccggacactttcttcaggaacggcaagcgg
tcagtcgcccacaacatgaccgcgcccaacaagctcttccgcatcatgaagaacggcacc
atcctttacaccatgaggttgaccattaacgccgagtgtcccatgaagctggtggatttc
cccatggacggacatgcctgccccctcaagtttggaagctacgcctatcccaaaacggag
atgatctacacttggaccaaagggcctcagcattcggtggaggtccctcccgagtcctcc
agcctcgtccagtacgatctcatcggccagacggtttccagcgagaccattaaatcaatc
acaggtgaatatgtggtgatgacggtctacttccacttgaagcggaagatgggctacttc
atgatccagacgtacatcccctgcataatgacagtgatcctctctcaagtgtccttctgg
ataaacaaggagtcggtcccggcgcggaccgtttttggcatcaccaccgtcctgaccatg
acgacactcagcatcagcgcccgccactctctccccaaggtctcgtacgcaaccgccatg
gactggttcatcgccgtctgcttcgcctttgtcttctctgccctcatcgagttcgccgcc
gtcaactatttcaccaacacacagattgagagggccaagaagaagccaggcaagtgtccc
ccagtgccccaaagcacgcccgtcaaggtgaaggacacagaggaagtgcagcagcaagtt
cccgacaccaacggttccctgaggaagcggatgaattacatctcgcaccaagacctggcg
ggccagccaagagcccagtccaccaccaacatctcagggctgggaagaggaaggcggctg
agagctctggctggcggcaccaacagcagctcctccaccctctcccgctccagccccaag
tccgagagcctgctgagcgtggcctcgtcctcggcgcagctgatgaagggcacgcctcag
cccgcggcgtccagcccggacgtgatggcggggacgccgggccggcgggacgccggcccc
gcgtctctgcagcacctgctcgggcccaagctggagcgcatccagatgatgggcaacaag
ctggagccgaagcagacgccctgctcccagccgaccgccgccggcatgggcggaaccagc
aaaattgacaaatacgcccgtatcctgttcccggtgtcctttggggcgttcaacatggtc
tactgggtggtctacctgtcgaaagacacagtggtggccaaagggggataa
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