Xiphophorus couchianus (Monterrey platyfish): 114139710
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Entry
114139710 CDS
T05908
Symbol
npas4
Name
(RefSeq) neuronal PAS domain-containing protein 4 isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114139710 (npas4)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
114139710 (npas4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
Motif
Other DBs
NCBI-GeneID:
114139710
NCBI-ProteinID:
XP_027865583
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Position
23:6517053..6524684
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AA seq
907 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISDADKARLSYLHIMSLACMYTRKSVFFTQEA
GSAGSEQERAAFLSFHELLELMQAMPGFLMLLTGEGKLLYLSDSVSEHLGHSMVDLVAQG
DSVYDIIDTADHFIMRTNLSASTSLEMDRLFRCRFNTSKSVRRQSAGNKPVLIRARCLAP
PCTASSYWTSNPVWVCFCTPLEPQPTRSGSGPDRDTTSAPPLAETNLFLACFHSQHGRDM
RLQAAQDNMTVYLGYDVTALRSRSWYGLLHPQDLSHASAQHRSLLREGGEGRAEMVVRVQ
AHDLSWVWLYMVLQLQHGDIPISSNNYIISDSEAWSVRQQLSSEQTQLTLVLSAGPSQPE
GLSLQSPETLSSPDQVFTPGSSGLSAQSFDFSTTGCSVGSSDEPGSSIAEPMQLEGDPRS
SISSLEEDSFFQPPPTETLSAASSPTPVTVETVADLDFLTQNILLPPSFQLDPPLPLPLP
LPLPLPTSQAQQAKEFVCTPPYTPQVGGTSFQFNEPLFSFDPTGTTTPPPSATTATSSTS
LAPSASSTAPPTTNPSPAPPTTLSTKLPLALPALSTDLLFPVETCSGALYEKLPPTPDSP
GDGDCTVMTLPEVRGPLYVDVPLGPLQCPPEGLLTPEASPGKQPCLTFFSLEREKERAEI
SLLAQHISSLAEGFYLDPLLSKLSPSSSPPSPFLSPAIEAADPVHMLREFYPVKTWRGLD
IPIFLDDDDSLFEENILETILQDDFAPNLSAPSSPTSPHTPVCWHQPSQFEGAGHICSVQ
SAQCNSVARRGASVATKDGEGLAEEAMEMEVEVASSPVSSCSSIPASPPLILTVSPSPAA
AMPVASPTPAVSCTQSLLEELAVLEPMFGAGASIAPGLGQQPELYQLQCHPSPQCFHKDG
SGSVPPF
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctcaaccaaaggggcgtccaaggcgcgacgagaccagatcaacgcggagatc
cggaacctgaaggacctgttgcccatctctgatgcagataaagcgcggctctcgtatctg
cacatcatgtccctggcctgcatgtacaccaggaagtccgtcttcttcacacaagaagct
ggatctgctggtagcgagcaggagagggctgcgtttctgtcttttcacgagctgttggag
ctgatgcaggcgatgccgggcttcctgatgctgcttaccggagaagggaagctgctctac
ctgtctgacagcgtctccgagcacctcggacactccatggtggatcttgtggcacaaggt
gacagcgtttatgatataatcgacactgcagatcacttcatcatgaggaccaacctgtct
gcttctacatcacttgagatggaccgtctctttcgctgccgtttcaacacctccaagtcg
gtgcggaggcagagtgccggaaataagccggttctgatccgtgctcgctgcctcgctcca
ccctgcaccgccagctcctattggacctccaacccggtgtgggtgtgtttctgcaccccg
ctggagccacagcccactcgctctgggtcagggccagacagggacacgacctctgccccc
ccgctggccgagaccaacctgtttctggcatgtttccactcccagcacggccgagacatg
aggctccaggcggcacaggacaacatgactgtgtatctgggctacgatgtgacagcttta
cgctcccgctcctggtacggcctcctccacccacaggatctgtcacacgcctctgctcag
caccgcagcctgttgagggaaggtggagagggaagagctgagatggtggttcgtgttcag
gctcacgatctgtcctgggtttggctctacatggtgcttcagctgcagcacggagacatt
cccatcagcagcaacaactacatcatcagtgactctgaagcctggtcggtgcgccagcag
ctcagctccgagcagacccagctgaccctggttttgagcgctggcccgtctcagccggag
ggcctgagcctgcagtctccagagaccctgtccagcccagaccaggtgttcacgcccggt
agcagcggtctgtccgcccagtccttcgacttcagcacgaccggctgcagcgttggctcc
tcggacgagccgggcagctccatcgccgagcccatgcagctggagggagaccctcgctcc
agcatctcctctctggaggaggacagcttcttccagccgccgccgacagaaaccctctcc
gccgcgtcttcgccgactcccgtcacggtggagacagtagcagatttggactttttaacc
cagaacattctcctgcctccgtccttccagctcgacccgccgctgccgctgccgctgccg
ctgccgctgccgctgcccacctctcaggctcagcaggccaaagagttcgtgtgcacccca
ccgtacacgccgcaggtcggaggaaccagcttccagttcaatgagccgctcttcagcttc
gaccccactggcaccacaacgcctcctccctctgctacgaccgccacctcctccacctcg
ctggcaccctccgcctcttccacagccccgcccactacgaaccccagccccgctccgccc
accaccctctccaccaagctgcccctggctttgcccgccctttccaccgacctgctgttc
cccgttgagacgtgcagcggcgccctgtacgagaagctgccccccacgcccgacagtcca
ggagacggagattgcacagtgatgactctgccggaggtccgcgggccgctttacgtcgac
gtgccgctcgggcccctccaatgtccccctgaaggcctgctgacccctgaggcgtctccc
ggcaaacagccctgcctcaccttcttctccttggagcgggagaaggaacgggcggagatt
tccctcctggctcaacacatcagctccctggctgagggtttctacctggatcctcttttg
tccaaactgtccccctcctcctcgcctccatcgcccttcctgtccccggctatcgaagcg
gcagatccagtccacatgctgagggagttttatcccgtaaaaacatggagaggtctggac
atccccatcttcctcgacgacgatgactctctgtttgaagagaacatcctagaaacgatc
ctgcaagacgacttcgctcccaacctctctgccccctccagccccacctccccacacacc
ccagtgtgttggcaccaaccctcccagtttgagggagcgggccacatctgtagcgtccaa
tcggcgcaatgtaactccgtggccagacgtggggcgagcgtggcgacgaaggacggggaa
gggctggcggaggaagcaatggagatggaggtggaggtggcgtcgtcgcccgtgtcgtct
tgctcctccatccctgcttcccctcccctcatcctcaccgtctccccgagccccgccgcc
gccatgcccgtcgcctcgcccacgcccgccgtgtcttgcactcagtccctcctggaggaa
ctggccgtcctggaacccatgtttggggcaggtgcctcgatcgcccctggcttagggcaa
caacctgagttgtatcaactccaatgtcatccatcgccacagtgcttccacaaagatggg
agtggaagtgttcctccgttctaa
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